Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI54334 Sapria himalayana HOM05D003467 ORTHO05D004220 2.9e-57 224.9 109 100.0
ClCG11G007180 Citrullus lanatus HOM05D003467 ORTHO05D004220 6.3e-36 154.1 113 71.7
Dinv06674 Davidia involucrata HOM05D003467 ORTHO05D004220 1.4e-35 152.9 113 71.7
Sed0026029 Sechium edule HOM05D003467 ORTHO05D004220 1.4e-35 152.9 115 70.4
Lj2C1229G12 Lonicera japonica HOM05D003467 ORTHO05D004220 5.3e-35 151.0 113 69.9
Nn1g10002 Nelumbo nucifera HOM05D003467 ORTHO05D004220 2.7e-34 148.7 110 70.9
SHI46915 Sapria himalayana HOM05D003467 ORTHO05D004220 6.5e-33 144.1 86 84.9
SHI52904 Sapria himalayana HOM05D003467 ORTHO05D004220 6.5e-33 144.1 86 84.9
MBI05_g05352_MAGBIO Magnolia biondii HOM05D003467 ORTHO05D004220 8.5e-33 143.7 110 67.3
SGA_v2.0_scaffold255G45505 Striga asiatica HOM05D003467 ORTHO05D004220 8.5e-33 143.7 112 65.2
Solyc00g500103.1 Solanum lycopersicum HOM05D003467 ORTHO05D004220 1.9e-32 142.5 114 66.7
Solyc00g500228.1 Solanum lycopersicum HOM05D003467 ORTHO05D004220 1.9e-32 142.5 114 66.7
CANSAT16G0031 Cannabis sativa HOM05D003467 ORTHO05D004220 4.2e-32 141.4 113 68.1
MBI16_g09480_MAGBIO Magnolia biondii HOM05D003467 ORTHO05D004220 4.2e-32 141.4 111 67.6
Nitab4.5_0009709g0060 Nicotiana tabacum HOM05D003467 ORTHO05D004220 7.2e-32 140.6 114 65.8
Sopen05g012590 Solanum pennellii HOM05D003467 ORTHO05D004220 7.2e-32 140.6 114 65.8
SHI36967 Sapria himalayana HOM05D003467 ORTHO05D004220 1.6e-31 139.4 113 66.4
Oeu039080.1 Olea europaea HOM05D003467 ORTHO05D004220 4.7e-31 137.9 115 64.3
SabraMtG0006300 Salix brachista HOM05D003467 ORTHO05D004220 1.0e-30 136.7 122 63.1
Nitab4.5_0001796g0090 Nicotiana tabacum HOM05D003467 ORTHO05D004220 1.8e-30 136.0 114 64.0
Nitab4.5_0004471g0080 Nicotiana tabacum HOM05D003467 ORTHO05D004220 2.3e-30 135.6 114 64.0
Peaxi162Scf00197g00034 Petunia axillaris HOM05D003467 ORTHO05D004220 3.0e-30 135.2 114 64.9
CsaV3_UNG208190 Cucumis sativus L. HOM05D003467 ORTHO05D004220 8.8e-30 133.7 116 62.9
Actinidia34926 Actinidia chinensis HOM05D003467 ORTHO05D004220 1.2e-29 133.3 113 62.8
SHI48358 Sapria himalayana HOM05D003467 ORTHO05D004220 1.5e-29 132.9 111 67.6
SHI47986 Sapria himalayana HOM05D003467 ORTHO05D004220 3.4e-29 131.7 78 85.9
CAN.G134.20 Capsicum annuum HOM05D003467 ORTHO05D004220 2.2e-28 129.0 114 61.4
Sopen06g007650 Solanum pennellii HOM05D003467 ORTHO05D004220 4.8e-28 127.9 114 60.5
SHI37556 Sapria himalayana HOM05D003467 ORTHO05D004220 1.1e-27 126.7 108 64.8
Rhsim07G0055600 Rhododendron simsii HOM05D003467 ORTHO05D004220 1.4e-27 126.3 113 61.9
unitig_87.g27965 Utricularia gibba HOM05D003467 ORTHO05D004220 3.1e-27 125.2 112 61.6
CAN.G502.14 Capsicum annuum HOM05D003467 ORTHO05D004220 9.1e-27 123.6 114 59.6
SHI36996 Sapria himalayana HOM05D003467 ORTHO05D004220 1.6e-26 122.9 110 61.8
SHI53641 Sapria himalayana HOM05D003467 ORTHO05D004220 2.7e-26 122.1 108 62.0
CARHR282930 Cardamine hirsuta HOM05D003467 ORTHO05D004220 3.5e-26 121.7 115 61.7
Sed0025530 Sechium edule HOM05D003467 ORTHO05D004220 1.3e-25 119.8 115 60.0
CAN.G1.25 Capsicum annuum HOM05D003467 ORTHO05D004220 1.7e-25 119.4 102 59.8
Peaxi162Scf00507g00009 Petunia axillaris HOM05D003467 ORTHO05D004220 6.5e-25 117.5 112 58.9
SHI53305 Sapria himalayana HOM05D003467 ORTHO05D004220 1.5e-24 116.3 113 63.7
Nitab4.5_0001152g0330 Nicotiana tabacum HOM05D003467 ORTHO05D004220 2.5e-24 115.5 111 57.7
SHI37961 Sapria himalayana HOM05D003467 ORTHO05D004220 2.5e-24 115.5 108 64.8
SHI40343 Sapria himalayana HOM05D003467 ORTHO05D004220 2.5e-24 115.5 108 64.8
SHI42055 Sapria himalayana HOM05D003467 ORTHO05D004220 2.5e-24 115.5 108 64.8
SHI52974 Sapria himalayana HOM05D003467 ORTHO05D004220 2.5e-24 115.5 108 64.8
AL3G44370 Arabidopsis lyrata HOM05D003467 ORTHO05D004220 3.3e-24 115.2 115 60.0
ATMG00560 Arabidopsis thaliana HOM05D003467 ORTHO05D004220 3.3e-24 115.2 115 60.0
SHI36699 Sapria himalayana HOM05D003467 ORTHO05D004220 3.3e-24 115.2 110 60.0
AT2G07715 Arabidopsis thaliana HOM05D003467 ORTHO05D004220 4.2e-24 114.8 115 60.0
BcaC08g43711 Brassica carinata HOM05D003467 ORTHO05D004220 4.2e-24 114.8 115 59.1
BNapus_Darmor_BZH_scaffold_234p00200 Brassica napus HOM05D003467 ORTHO05D004220 4.2e-24 114.8 115 59.1
BolSC28t60347H Brassica oleracea HOM05D003467 ORTHO05D004220 4.2e-24 114.8 115 59.1
BraSC48t46273Z Brassica rapa HOM05D003467 ORTHO05D004220 4.2e-24 114.8 115 59.1
Sp3g25530 Schrenkiella parvula HOM05D003467 ORTHO05D004220 4.2e-24 114.8 115 59.1
SHI52008 Sapria himalayana HOM05D003467 ORTHO05D004220 2.1e-23 112.5 110 58.2
Thhalv10013769m.g Eutrema salsugineum HOM05D003467 ORTHO05D004220 3.6e-23 111.7 115 57.4
SHI37866 Sapria himalayana HOM05D003467 ORTHO05D004220 8.0e-23 110.5 113 61.1
SHI43968 Sapria himalayana HOM05D003467 ORTHO05D004220 1.4e-22 109.8 99 61.6
SHI50250 Sapria himalayana HOM05D003467 ORTHO05D004220 1.4e-22 109.8 113 55.8
BolC4t23495H Brassica oleracea HOM05D003467 ORTHO05D004220 1.8e-22 109.4 115 58.3
SGA_v2.0_scaffold507G52535 Striga asiatica HOM05D003467 ORTHO05D004220 9.8e-21 103.6 108 56.5
CDE02G2877 Ceratophyllum demersum HOM05D003467 ORTHO05D004220 1.3e-20 103.2 62 79.0
C09p21580 Brassica napus HOM05D003467 ORTHO05D004220 3.7e-20 101.7 103 58.3
SHI51177 Sapria himalayana HOM05D003467 ORTHO05D004220 6.3e-20 100.9 86 65.1
SHI51351 Sapria himalayana HOM05D003467 ORTHO05D004220 6.3e-20 100.9 108 55.6
SHI52601 Sapria himalayana HOM05D003467 ORTHO05D004220 6.3e-20 100.9 108 55.6
Aqoxy4G00639 Aquilegia oxysepala HOM05D003467 ORTHO05D004220 8.3e-20 100.5 109 52.3
Nitab4.5_0006602g0040 Nicotiana tabacum HOM05D003467 ORTHO05D004220 1.8e-19 99.4 94 56.4
SHI38192 Sapria himalayana HOM05D003467 ORTHO05D004220 5.4e-19 97.8 108 54.6
Aa31csc239G20 Aethionema arabicum HOM05D003467 ORTHO05D004220 1.2e-18 96.7 103 57.3
BraSC77t46654Z Brassica rapa HOM05D003467 ORTHO05D004220 2.0e-18 95.9 63 76.2
BolC9t55063H Brassica oleracea HOM05D003467 ORTHO05D004220 3.5e-18 95.1 103 56.3
Nitab4.5_0012067g0060 Nicotiana tabacum HOM05D003467 ORTHO05D004220 3.5e-18 95.1 84 61.9
SHI37886 Sapria himalayana HOM05D003467 ORTHO05D004220 3.5e-18 95.1 108 51.9
SHI37209 Sapria himalayana HOM05D003467 ORTHO05D004220 5.9e-18 94.4 108 50.9
SHI38898 Sapria himalayana HOM05D003467 ORTHO05D004220 1.9e-16 89.4 111 52.3
Manes.02G141800 Manihot esculenta HOM05D003467 ORTHO05D004220 2.5e-16 89.0 111 49.5
Atru.chr10.2291 Acer truncatum HOM05D003467 ORTHO05D004220 1.2e-15 86.7 74 64.9
Manes.01G181900 Manihot esculenta HOM05D003467 ORTHO05D004220 2.1e-15 85.9 110 47.3
Solyc08g022180.1 Solanum lycopersicum HOM05D005034 ORTHO05D006234 2.1e-15 85.9 115 42.6
Ciclev10005397m.g Citrus clementina HOM05D003467 ORTHO05D004220 6.8e-14 80.9 112 45.5
Zm00001eb180350 Zea mays HOM05D000540 ORTHO05D000681 2.6e-13 79.0 70 57.1
Nitab4.5_0002635g0050 Nicotiana tabacum HOM05D003467 ORTHO05D004220 3.4e-13 78.6 83 59.0
SHI38985 Sapria himalayana HOM05D003467 ORTHO05D004220 4.4e-13 78.2 74 63.5
Sed0002506 Sechium edule HOM05D003467 ORTHO05D004220 3.7e-12 75.1 114 42.1
SHI44578 Sapria himalayana HOM05D003467 ORTHO05D004220 6.4e-12 74.3 36 91.7
Sc16g0002730 Simmondsia chinensis HOM05D003467 ORTHO05D004220 6.4e-12 74.3 78 48.7
HanXRQChr14g0459301 Helianthus annuus HOM05D003467 ORTHO05D004220 2.4e-11 72.4 106 39.6
SalBow7G2519 Salvia bowleyana HOM05D003467 ORTHO05D004220 4.1e-11 71.6 98 42.9
SalBow7G4829 Salvia bowleyana HOM05D003467 ORTHO05D004220 4.1e-11 71.6 98 42.9
CDE02G4335 Ceratophyllum demersum HOM05D003467 ORTHO05D004220 5.4e-11 71.2 41 82.9
Migut.N03022 Erythranthe guttata HOM05D003467 ORTHO05D004220 9.2e-11 70.5 67 58.2
SalBow1G2953 Salvia bowleyana HOM05D003467 ORTHO05D004220 1.2e-10 70.1 58 56.9
SalBow1G5399 Salvia bowleyana HOM05D003467 ORTHO05D004220 1.6e-10 69.7 98 42.9
SalBow1G6425 Salvia bowleyana HOM05D003467 ORTHO05D004220 2.0e-10 69.3 58 56.9
vmacro02728 Vaccinium macrocarpon HOM05D006061 ORTHO05D007450 4.6e-10 68.2 54 66.7
SHI34611 Sapria himalayana HOM05D003467 ORTHO05D004220 6.0e-10 67.8 74 54.1
Lsat_1_v5_gn_6_32340 Lactuca sativa HOM05D003467 ORTHO05D004220 7.8e-10 67.4 78 42.3
SHI52927 Sapria himalayana HOM05D003467 ORTHO05D004220 1.0e-09 67.0 111 42.3
SHI37826 Sapria himalayana HOM05D003467 ORTHO05D004220 1.3e-09 66.6 36 86.1
Nitab4.5_0009703g0010 Nicotiana tabacum HOM05D003467 ORTHO05D004220 3.0e-09 65.5 76 53.9
Lsat_1_v5_gn_1_109980 Lactuca sativa HOM05D003467 ORTHO05D004220 3.9e-09 65.1 104 36.5
Lsat_1_v5_gn_5_114100 Lactuca sativa HOM05D003467 ORTHO05D004220 6.6e-09 64.3 76 40.8
SHI38986 Sapria himalayana HOM05D003467 ORTHO05D004220 1.1e-08 63.5 36 86.1
Lsat_1_v5_gn_2_118881 Lactuca sativa HOM05D003467 ORTHO05D004220 1.9e-08 62.8 75 44.0
SHI38317 Sapria himalayana HOM05D003467 ORTHO05D004220 1.9e-08 62.8 108 41.7
Glyma.08G365200 Glycine max HOM05D003467 ORTHO05D004220 7.3e-08 60.8 74 51.4
EL10Ac6g15561 Beta vulgaris HOM05D003467 ORTHO05D004220 1.2e-07 60.1 54 51.9
CARHR288290 Cardamine hirsuta HOM05D003467 ORTHO05D004220 2.8e-07 58.9 92 46.7
AUR62004052 Chenopodium quinoa HOM05D003467 ORTHO05D004220 2.8e-07 58.9 65 46.2
AUR62007567 Chenopodium quinoa HOM05D003467 ORTHO05D004220 3.6e-07 58.5 65 46.2
Glyma.07G149151 Glycine max HOM05D003467 ORTHO05D004220 6.2e-07 57.8 74 50.0
Lalb_Chr04g0257431 Lupinus albus HOM05D003467 ORTHO05D004220 6.2e-07 57.8 72 45.8
BcaC05g26882 Brassica carinata HOM05D003467 ORTHO05D004220 8.0e-07 57.4 109 41.3
Lsat_1_v5_gn_8_11861 Lactuca sativa HOM05D003467 ORTHO05D004220 8.0e-07 57.4 76 40.8
Hund13975 Selenicereus undatus HOM05D003467 ORTHO05D004220 8.0e-07 57.4 58 48.3
Ca_04056_v3 Cicer arietinum L. HOM05D003467 ORTHO05D004220 3.1e-06 55.5 84 39.3
Lsat_1_v5_gn_9_26841 Lactuca sativa HOM05D003467 ORTHO05D004220 3.1e-06 55.5 73 38.4
SHI04750 Sapria himalayana HOM05D000330 ORTHO05D000209 3.1e-06 55.5 102 40.2
SHI42501 Sapria himalayana HOM05D003467 ORTHO05D004220 6.8e-06 54.3 65 49.2
TPR.G9704 Trifolium pratense HOM05D003467 ORTHO05D004220 6.8e-06 54.3 86 37.2


User provided reference genes

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