Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI51096 Sapria himalayana HOM05D000890 ORTHO05D000697 7.4e-64 246.9 112 100.0
SHI54322 Sapria himalayana HOM05D000890 ORTHO05D000697 4.2e-19 98.2 41 100.0
SHI39098 Sapria himalayana HOM05D000890 ORTHO05D033812 1.2e-18 96.7 41 97.6
SHI44215 Sapria himalayana HOM05D000890 ORTHO05D033812 1.7e-12 76.3 31 96.8
SHI35481 Sapria himalayana HOM05D000890 ORTHO05D007069 1.9e-11 72.8 32 93.8
BolSC47t61110H Brassica oleracea HOM05D000890 ORTHO05D000697 4.0e-09 65.1 41 70.7
Ah.10g027580 Amaranthus hybridus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
AL2G21312 Arabidopsis lyrata HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
AL2G25560 Arabidopsis lyrata HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
ATCG00270 Arabidopsis thaliana HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
arahy.Tifrunner.gnm1.ann1.6C48SL Arachis hypogaea HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
arahy.Tifrunner.gnm1.ann1.8A6KBK Arachis hypogaea HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
arahy.Tifrunner.gnm1.ann1.BNA7ZE Arachis hypogaea HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
arahy.Tifrunner.gnm1.ann1.FQ1JZW Arachis hypogaea HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
arahy.Tifrunner.gnm1.ann1.MX15H0 Arachis hypogaea HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
EL10As12g24018 Beta vulgaris HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
BcaC04g20700 Brassica carinata HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
C04p22590 Brassica napus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
C09p40430 Brassica napus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
BolSC29t60575H Brassica oleracea HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
BolSC44t60852H Brassica oleracea HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
BolSC49t61195H Brassica oleracea HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
BraSC140t45601Z Brassica rapa HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
BraSC143t45684Z Brassica rapa HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
BraSC151t45700Z Brassica rapa HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Carub.0006s0538 Capsella rubella HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
CAN.G100.45 Capsicum annuum HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
CAN.G511.2 Capsicum annuum HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
CARHR281960 Cardamine hirsuta HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Cfa010051 Carpinus fangiana HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
CDE08G0381 Ceratophyllum demersum HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
AUR62039623 Chenopodium quinoa HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Migut.D01346 Erythranthe guttata HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Migut.D01420 Erythranthe guttata HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
FAN04G0551 Fragaria x ananassa HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Gohir.D08G127100 Gossypium hirsutum HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hma1.2p1_4141F.1_g338370 Hydrangea macrophylla HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Lalb_Chr01g0015021 Lupinus albus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Medtr0002s0420 Medicago truncatula HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Nn082s42678 Nelumbo nucifera HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Nn287s46148 Nelumbo nucifera HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Potri.013G142201 Populus trichocarpa HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
PGR111G0108 Punica granatum HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
RhsimPtG0003500 Rhododendron simsii HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
RcHm_v2.0_CPg0502341 Rosa chinensis HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
SabraPtG0001700 Salix brachista HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund08565 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund17620 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund19313 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund25934 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund27451 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund27563 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund27607 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund27643 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund27657 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund27669 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund27700 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund27745 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund27762 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund27804 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund27841 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund27868 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund27915 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund27927 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund27943 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund27999 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund28019 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund28027 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund28057 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund28086 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund28122 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund28138 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund28155 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund28164 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund28190 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund28207 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund28248 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund28281 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund28293 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund28337 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund28350 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund28354 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund28371 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund28384 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund28397 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund28412 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund28499 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund28554 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund28579 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund28619 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund28643 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund28685 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund28696 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund28701 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund28716 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund28805 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund28823 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund28836 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund28903 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund28915 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund28983 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund29054 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund29449 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund29779 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund30001 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund30122 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund30749 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Hund30750 Selenicereus undatus HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
SEGI_08189 Sequoiadendron giganteum HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
SEGI_33822 Sequoiadendron giganteum HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Sc13g0006960 Simmondsia chinensis HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
SGA_v2.0_scaffold119G32683 Striga asiatica HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
TAR374G0871 Trochodendron aralioides HOM05D004547 ORTHO05D005133 2.0e-08 62.8 41 68.3
unitig_91.g26499 Utricularia gibba HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
vmacro22408 Vaccinium macrocarpon HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
VMungo0446G0001 Vigna mungo HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Zm00001eb255940 Zea mays HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Zm00001eb435310 Zea mays HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Zm00001eb435780 Zea mays HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Zm00001eb436860 Zea mays HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Zm00001eb437290 Zea mays HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
Zm00001eb442720 Zea mays HOM05D000890 ORTHO05D000697 2.0e-08 62.8 41 68.3
AUR62043692 Chenopodium quinoa HOM05D000890 ORTHO05D000697 2.6e-08 62.4 41 68.3
COL.COLO4_01093 Corchorus olitorius HOM05D000890 ORTHO05D000697 2.6e-08 62.4 41 68.3
DCAR_032479 Daucus carota HOM05D000890 ORTHO05D000697 2.6e-08 62.4 41 68.3
HanXRQChr00c0439g0574731 Helianthus annuus HOM05D000890 ORTHO05D000697 2.6e-08 62.4 41 68.3
HanXRQChr02g0041631 Helianthus annuus HOM05D000890 ORTHO05D000697 2.6e-08 62.4 41 68.3
HanXRQChr02g0044831 Helianthus annuus HOM05D000890 ORTHO05D000697 2.6e-08 62.4 41 68.3
HanXRQChr04g0099321 Helianthus annuus HOM05D000890 ORTHO05D000697 2.6e-08 62.4 41 68.3
HanXRQChr08g0210231 Helianthus annuus HOM05D000890 ORTHO05D000697 2.6e-08 62.4 41 68.3
HanXRQChr11g0326671 Helianthus annuus HOM05D000890 ORTHO05D000697 2.6e-08 62.4 41 68.3
HanXRQCPg0579861 Helianthus annuus HOM05D000890 ORTHO05D000697 2.6e-08 62.4 41 68.3
Lsat_1_v5_gn_1_88080 Lactuca sativa HOM05D000890 ORTHO05D000697 2.6e-08 62.4 41 68.3
Lsat_1_v5_gn_2_50780 Lactuca sativa HOM05D000890 ORTHO05D000697 2.6e-08 62.4 41 68.3
Lsat_1_v5_gn_4_102100 Lactuca sativa HOM05D000890 ORTHO05D000697 2.6e-08 62.4 41 68.3
Lsat_1_v5_gn_4_58161 Lactuca sativa HOM05D000890 ORTHO05D000697 2.6e-08 62.4 41 68.3
Lsat_1_v5_gn_8_1941 Lactuca sativa HOM05D000890 ORTHO05D000697 2.6e-08 62.4 41 68.3
Lj2A1239T195 Lonicera japonica HOM05D000890 ORTHO05D000697 2.6e-08 62.4 41 68.3
Medtr4g073360 Medicago truncatula HOM05D000890 ORTHO05D000697 2.6e-08 62.4 41 68.3
Nitab4.5_0000072g0240 Nicotiana tabacum HOM05D000890 ORTHO05D000697 2.6e-08 62.4 41 68.3
Nitab4.5_0000220g0160 Nicotiana tabacum HOM05D000890 ORTHO05D000697 2.6e-08 62.4 41 68.3
PSO548G0078 Papaver somniferum HOM05D000890 ORTHO05D000697 2.6e-08 62.4 41 68.3
Peaxi162Scf00395g00711 Petunia axillaris HOM05D000890 ORTHO05D000697 2.6e-08 62.4 41 68.3
Sed0003780 Sechium edule HOM05D000890 ORTHO05D000697 2.6e-08 62.4 41 68.3
Sed0009279 Sechium edule HOM05D000890 ORTHO05D000697 2.6e-08 62.4 41 68.3
Sed0009663 Sechium edule HOM05D000890 ORTHO05D000697 2.6e-08 62.4 41 68.3
Solyc00g500054.1 Solanum lycopersicum HOM05D000890 ORTHO05D000697 2.6e-08 62.4 41 68.3
Solyc00g500136.1 Solanum lycopersicum HOM05D000890 ORTHO05D000697 2.6e-08 62.4 41 68.3
Solyc00g500206.1 Solanum lycopersicum HOM05D000890 ORTHO05D000697 2.6e-08 62.4 41 68.3
PGSC0003DMG400001746 Solanum tuberosum HOM05D000890 ORTHO05D000697 2.6e-08 62.4 41 68.3
PGSC0003DMG400017258 Solanum tuberosum HOM05D000890 ORTHO05D000697 2.6e-08 62.4 41 68.3
AUR62024084 Chenopodium quinoa HOM05D000890 ORTHO05D000697 7.5e-08 60.8 41 68.3
FAN27G1646 Fragaria x ananassa HOM05D000890 ORTHO05D000697 7.5e-08 60.8 41 65.9
HPP92_022117 Vanilla planifolia HOM05D000890 ORTHO05D000697 7.5e-08 60.8 41 65.9
HanXRQChr17g0549121 Helianthus annuus HOM05D000890 ORTHO05D000697 9.8e-08 60.5 41 65.9
Lsat_1_v5_gn_4_147801 Lactuca sativa HOM05D000890 ORTHO05D000697 9.8e-08 60.5 41 65.9
HanXRQChr01g0016061 Helianthus annuus HOM05D000890 ORTHO05D000697 1.7e-07 59.7 41 65.9
C03p57850 Brassica napus HOM05D000890 ORTHO05D000697 3.7e-07 58.5 40 67.5
BraA06t25435Z Brassica rapa HOM05D000890 ORTHO05D000697 3.7e-07 58.5 40 67.5
Migut.F01523 Erythranthe guttata HOM05D000890 ORTHO05D000697 3.7e-07 58.5 41 63.4
MD09G1235700 Malus domestica HOM05D000890 ORTHO05D000697 6.3e-07 57.8 41 61.0
Sed0010353 Sechium edule HOM05D000890 ORTHO05D000697 6.3e-07 57.8 42 66.7
arahy.Tifrunner.gnm1.ann1.4LZ7P3 Arachis hypogaea HOM05D000890 ORTHO05D000697 1.1e-06 57.0 41 63.4
BcaC08g43700 Brassica carinata HOM05D000890 ORTHO05D000697 1.8e-06 56.2 41 63.4
SEGI_03316 Sequoiadendron giganteum HOM05D000890 ORTHO05D000697 1.8e-06 56.2 41 61.0
BolC6t36204H Brassica oleracea HOM05D000890 ORTHO05D000697 2.4e-06 55.8 41 61.0
BraA07t28399Z Brassica rapa HOM05D000890 ORTHO05D000697 4.1e-06 55.1 41 63.4
Lsat_1_v5_gn_3_53040 Lactuca sativa HOM05D000890 ORTHO05D000697 4.1e-06 55.1 41 61.0
Nitab4.5_0000248g0030 Nicotiana tabacum HOM05D000680 ORTHO05D000697 4.1e-06 55.1 41 58.5
Nitab4.5_0005637g0080 Nicotiana tabacum HOM05D000890 ORTHO05D000697 5.4e-06 54.7 41 56.1
SEGI_26751 Sequoiadendron giganteum HOM05D000890 ORTHO05D000697 7.0e-06 54.3 38 63.2


User provided reference genes

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