Gene: RcHm_v2.0_CPg0502341
General Information
Structural Information
- Species Rosa chinensis
- Gene Identifier RcHm_v2.0_CPg0502341
- Transcript Identifier RcHm_v2.0_CPg0502341
- Gene Type Coding gene
- Location RcHm_v2.0_CP : 78618-79679 : negative
Gene Family Information
- ID HOM05D000890
- #Genes/#Species 673/80
- Phylogenetic origin
- ID ORTHO05D000697
- #Genes/#Species 665/80
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009769 | ISO | PLAZA Integrative Orthology | photosynthesis, light harvesting in photosystem II | ATCG00270 |
| GO:0009767 | ISO | PLAZA Homology (enrichment) | photosynthetic electron transport chain | HOM05D000890 |
| GO:0009772 | IEA | InterPro | photosynthetic electron transport in photosystem II | |
| GO:0015979 | IEA | InterPro | photosynthesis | |
| GO:0019684 | IEA | InterPro | photosynthesis, light reaction |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016168 | ISO | PLAZA Integrative Orthology | chlorophyll binding | ATCG00280 |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | ATCG00280 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | ATCG00280 |
| GO:0045157 | ISO | PLAZA Integrative Orthology | electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity | ATCG00270 |
| GO:0045156 | IEA | InterPro | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010287 | ISO | PLAZA Integrative Orthology | plastoglobule | ATCG00280 |
| GO:0009539 | ISO | PLAZA Integrative Orthology | photosystem II reaction center | ATCG00280 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | ATCG00280 |
| GO:0009579 | ISO | PLAZA Integrative Orthology | thylakoid | ATCG00280 |
| GO:0009535 | ISO | PLAZA Integrative Orthology | chloroplast thylakoid membrane | ATCG00280 |
| GO:0009521 | ISO | PLAZA Homology (enrichment) | photosystem | HOM05D000890 |
| GO:0009533 | ISO | PLAZA Integrative Orthology | chloroplast stromal thylakoid | ATCG00280 |
| GO:0009534 | ISO | PLAZA Integrative Orthology | chloroplast thylakoid | ATCG00280 |
| GO:0016020 | IEA | InterPro | membrane | |
| GO:0009523 | IEA | InterPro | photosystem II |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 1.1.1.2.1.2 | Photosynthesis.photophosphorylation.photosystem II.PS-II complex.reaction center complex.component D2/PsbD |