Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI49287 Sapria himalayana HOM05D003729 ORTHO05D004384 1.7e-151 539.3 269 100.0
SHI48245 Sapria himalayana HOM05D003729 ORTHO05D004384 1.4e-68 263.8 144 91.0
SHI46294 Sapria himalayana HOM05D003729 ORTHO05D004384 7.4e-62 241.5 122 95.9
SHI53539 Sapria himalayana HOM05D003729 ORTHO05D365166 1.0e-55 221.1 113 95.6
COL.COLO4_31341 Corchorus olitorius HOM05D003729 ORTHO05D004384 2.2e-37 160.2 244 41.8
Duzib106G1244 Durio zibethinus HOM05D003729 ORTHO05D004384 2.2e-37 160.2 230 43.9
Thecc.05G137400 Theobroma cacao HOM05D003729 ORTHO05D004384 2.2e-37 160.2 230 43.5
Manes.15G116200 Manihot esculenta HOM05D003729 ORTHO05D004384 4.8e-37 159.1 230 42.6
Gohir.D11G323300 Gossypium hirsutum HOM05D003729 ORTHO05D004384 1.4e-36 157.5 230 43.0
Gorai.007G353300 Gossypium raimondii HOM05D003729 ORTHO05D004384 1.4e-36 157.5 230 43.0
Ah.04g151040 Amaranthus hybridus HOM05D003729 ORTHO05D004384 2.4e-36 156.8 230 43.0
Dinv34365 Davidia involucrata HOM05D003729 ORTHO05D004384 1.6e-35 154.1 230 41.7
CiPaw.09G047000 Carya illinoinensis HOM05D003729 ORTHO05D004384 2.0e-35 153.7 244 39.8
Atru.chr11.1446 Acer truncatum HOM05D003729 ORTHO05D004384 2.7e-35 153.3 233 42.1
Atru.chr11.1476 Acer truncatum HOM05D003729 ORTHO05D004384 2.7e-35 153.3 233 42.1
Ciclev10027979m.g Citrus clementina HOM05D003729 ORTHO05D004384 2.7e-35 153.3 247 40.1
TAR629G1039 Trochodendron aralioides HOM05D003729 ORTHO05D004384 2.7e-35 153.3 225 41.8
Dinv26813 Davidia involucrata HOM05D003729 ORTHO05D004384 3.5e-35 152.9 230 41.7
Sc13g0001200 Simmondsia chinensis HOM05D003729 ORTHO05D004384 3.5e-35 152.9 230 41.7
MD06G1011700 Malus domestica HOM05D003729 ORTHO05D004384 4.5e-35 152.5 225 41.3
Aqoxy3G00221 Aquilegia oxysepala HOM05D003729 ORTHO05D004384 5.9e-35 152.1 119 63.0
Eucgr.B01227 Eucalyptus grandis HOM05D003729 ORTHO05D004384 7.7e-35 151.8 244 39.3
Gohir.A11G307900 Gossypium hirsutum HOM05D003729 ORTHO05D004384 7.7e-35 151.8 230 41.7
vmacro09025 Vaccinium macrocarpon HOM05D003729 ORTHO05D004384 1.0e-34 151.4 230 39.6
AUR62003735 Chenopodium quinoa HOM05D003729 ORTHO05D004384 1.3e-34 151.0 230 41.3
AUR62023904 Chenopodium quinoa HOM05D003729 ORTHO05D004384 1.3e-34 151.0 244 39.3
Potri.016G037400 Populus trichocarpa HOM05D003729 ORTHO05D004384 1.3e-34 151.0 244 38.5
Cfa020012 Carpinus fangiana HOM05D003729 ORTHO05D004384 1.7e-34 150.6 230 41.3
Sed0006249 Sechium edule HOM05D003729 ORTHO05D004384 1.7e-34 150.6 225 41.3
Actinidia38159 Actinidia chinensis HOM05D003729 ORTHO05D004384 2.3e-34 150.2 225 40.9
Prupe.8G004300 Prunus persica HOM05D003729 ORTHO05D004384 2.9e-34 149.8 225 40.4
CsaV3_7G006250 Cucumis sativus L. HOM05D003729 ORTHO05D004384 3.8e-34 149.4 225 40.4
Hma1.2p1_0402F.1_g145090 Hydrangea macrophylla HOM05D003729 ORTHO05D004384 3.8e-34 149.4 230 41.3
Cc06_g19080 Coffea canephora HOM05D003729 ORTHO05D004384 5.0e-34 149.1 245 38.8
CSS0000349 Camellia sinensis var. sinensis HOM05D003729 ORTHO05D004384 6.5e-34 148.7 225 40.0
QL06p031735 Quercus lobata HOM05D003729 ORTHO05D004384 6.5e-34 148.7 244 39.3
GSVIVG01033615001 Vitis vinifera HOM05D003729 ORTHO05D004384 6.5e-34 148.7 230 41.7
EL10Ac3g07219 Beta vulgaris HOM05D003729 ORTHO05D004384 8.6e-34 148.3 230 41.3
Cpa.g.sc1212.1 Carica papaya HOM05D003729 ORTHO05D004384 8.6e-34 148.3 105 70.5
Lsat_1_v5_gn_5_75341 Lactuca sativa HOM05D003729 ORTHO05D004384 8.6e-34 148.3 230 40.4
Prupe.5G014500 Prunus persica HOM05D003729 ORTHO05D004384 1.1e-33 147.9 225 40.0
ClCG09G015010 Citrullus lanatus HOM05D003729 ORTHO05D004384 1.5e-33 147.5 225 40.0
MELO3C018665.2 Cucumis melo HOM05D003729 ORTHO05D004384 1.5e-33 147.5 225 40.0
HanXRQChr10g0311271 Helianthus annuus HOM05D003729 ORTHO05D004384 1.5e-33 147.5 227 40.5
Sopen10g034990 Solanum pennellii HOM05D003729 ORTHO05D004384 1.5e-33 147.5 230 40.9
Migut.N03364 Erythranthe guttata HOM05D003729 ORTHO05D004384 1.9e-33 147.1 105 68.6
DCAR_013638 Daucus carota HOM05D003729 ORTHO05D004384 2.5e-33 146.7 227 40.1
FvH4_2g11640 Fragaria vesca HOM05D003729 ORTHO05D004384 2.5e-33 146.7 244 38.5
Lj1A1094G13 Lonicera japonica HOM05D003729 ORTHO05D004384 2.5e-33 146.7 227 40.5
RcHm_v2.0_Chr6g0270881 Rosa chinensis HOM05D003729 ORTHO05D004384 3.2e-33 146.4 239 37.7
Sabra16G0039300 Salix brachista HOM05D003729 ORTHO05D004384 3.2e-33 146.4 230 40.0
Sabra16G0044200 Salix brachista HOM05D003729 ORTHO05D004384 3.2e-33 146.4 230 40.0
Atru.chr1.117 Acer truncatum HOM05D003729 ORTHO05D004384 4.2e-33 146.0 247 38.9
HanXRQChr12g0359771 Helianthus annuus HOM05D003729 ORTHO05D004384 5.5e-33 145.6 230 40.4
Nitab4.5_0005447g0050 Nicotiana tabacum HOM05D003729 ORTHO05D004384 5.5e-33 145.6 230 40.0
PGR031G2313 Punica granatum HOM05D003729 ORTHO05D004384 5.5e-33 145.6 230 40.0
arahy.Tifrunner.gnm1.ann1.UC9EW5 Arachis hypogaea HOM05D003729 ORTHO05D004384 7.2e-33 145.2 225 39.1
Rhsim04G0111000 Rhododendron simsii HOM05D003729 ORTHO05D004384 7.2e-33 145.2 225 38.2
THA.LOC104802558 Tarenaya hassleriana HOM05D003729 ORTHO05D004384 7.2e-33 145.2 119 60.5
ECA234G1736 Erigeron canadensis HOM05D003729 ORTHO05D004384 9.5e-33 144.8 230 40.4
Nitab4.5_0000381g0340 Nicotiana tabacum HOM05D003729 ORTHO05D004384 1.2e-32 144.4 230 40.0
CAN.G1099.5 Capsicum annuum HOM05D003729 ORTHO05D004384 1.6e-32 144.1 230 40.0
Thhalv10005807m.g Eutrema salsugineum HOM05D003729 ORTHO05D004384 1.6e-32 144.1 118 61.9
Peaxi162Scf00146g00613 Petunia axillaris HOM05D003729 ORTHO05D004384 2.1e-32 143.7 230 40.4
MBI04_g42401_MAGBIO Magnolia biondii HOM05D003729 ORTHO05D004384 3.6e-32 142.9 105 66.7
Os06g0128400 Oryza sativa ssp. japonica HOM05D003729 ORTHO05D004384 3.6e-32 142.9 119 57.1
Sp5g05590 Schrenkiella parvula HOM05D003729 ORTHO05D004384 3.6e-32 142.9 118 61.0
PSO782G2431 Papaver somniferum HOM05D003729 ORTHO05D004384 6.1e-32 142.1 105 66.7
MSTRG.19814 Avicennia marina HOM05D003729 ORTHO05D004384 8.0e-32 141.7 102 67.6
SGA_v2.0_scaffold149G36565 Striga asiatica HOM05D003729 ORTHO05D004384 1.8e-31 140.6 105 64.8
ATR0757G154 Amborella trichopoda HOM05D003729 ORTHO05D004384 3.0e-31 139.8 244 36.9
CARHR167140 Cardamine hirsuta HOM05D003729 ORTHO05D004384 3.0e-31 139.8 118 59.3
PSO478G2512 Papaver somniferum HOM05D003729 ORTHO05D004384 3.0e-31 139.8 105 64.8
unitig_27.g24938 Utricularia gibba HOM05D003729 ORTHO05D004384 3.0e-31 139.8 227 37.9
HPP92_002023 Vanilla planifolia HOM05D003729 ORTHO05D004384 3.0e-31 139.8 102 64.7
AT3G56990 Arabidopsis thaliana HOM05D003729 ORTHO05D004384 5.2e-31 139.0 118 59.3
BcaC07g40088 Brassica carinata HOM05D003729 ORTHO05D004384 8.8e-31 138.3 104 65.4
AL5G38440 Arabidopsis lyrata HOM05D003729 ORTHO05D004384 1.2e-30 137.9 104 66.3
C08p32320 Brassica napus HOM05D003729 ORTHO05D004384 1.2e-30 137.9 104 65.4
Ca_11233_v3 Cicer arietinum L. HOM05D003729 ORTHO05D004384 1.2e-30 137.9 104 62.5
Medtr2g081080 Medicago truncatula HOM05D003729 ORTHO05D004384 1.2e-30 137.9 104 64.4
Psat5g246840 Pisum sativum HOM05D003729 ORTHO05D004384 1.2e-30 137.9 104 63.5
Aa31LG10G11890 Aethionema arabicum HOM05D003729 ORTHO05D004384 1.5e-30 137.5 105 63.8
BcaC07g40019 Brassica carinata HOM05D003729 ORTHO05D004384 1.5e-30 137.5 104 65.4
BolC8t50846H Brassica oleracea HOM05D003729 ORTHO05D004384 1.5e-30 137.5 104 65.4
Nn7g37723 Nelumbo nucifera HOM05D003729 ORTHO05D004384 1.5e-30 137.5 105 66.7
A09p49920 Brassica napus HOM05D003729 ORTHO05D004384 2.0e-30 137.1 104 65.4
BraA09t40443Z Brassica rapa HOM05D003729 ORTHO05D004384 2.0e-30 137.1 104 65.4
Carub.0005s2373 Capsella rubella HOM05D003729 ORTHO05D004384 2.0e-30 137.1 116 60.3
Lj6g0002169 Lotus japonicus HOM05D003729 ORTHO05D004384 4.4e-30 136.0 225 36.9
Lalb_Chr06g0173631 Lupinus albus HOM05D003729 ORTHO05D004384 5.7e-30 135.6 104 61.5
Zm00001eb373800 Zea mays HOM05D003729 ORTHO05D004384 5.7e-30 135.6 227 38.8
VMungo0464G0714 Vigna mungo HOM05D003729 ORTHO05D004384 9.8e-30 134.8 225 36.9
Glyma.07G106900 Glycine max HOM05D003729 ORTHO05D004384 1.3e-29 134.4 104 60.6
Lj1g0021267 Lotus japonicus HOM05D003729 ORTHO05D004384 1.7e-29 134.0 225 36.4
HanXRQChr09g0238921 Helianthus annuus HOM05D003729 ORTHO05D004384 3.7e-29 132.9 102 62.7
Phvul.004G146700 Phaseolus vulgaris HOM05D003729 ORTHO05D004384 4.9e-29 132.5 225 36.4
Glyma.09G171000 Glycine max HOM05D003729 ORTHO05D004384 8.3e-29 131.7 226 37.6
CANSAT64G1452 Cannabis sativa HOM05D003729 ORTHO05D004384 7.0e-28 128.6 105 61.9
SMO334G0073 Selaginella moellendorffii HOM05D003729 ORTHO05D004384 7.0e-28 128.6 102 58.8
AagrBONN_evm.TU.Sc2ySwM_228.5647 Anthoceros agrestis HOM05D003729 ORTHO05D004384 1.2e-27 127.9 102 59.8
Mapoly0009s0077 Marchantia polymorpha HOM05D003729 ORTHO05D004384 1.2e-27 127.9 229 33.6
A07p23200 Brassica napus HOM05D003729 ORTHO05D004384 3.5e-27 126.3 104 61.5
BraA07t29984Z Brassica rapa HOM05D003729 ORTHO05D004384 3.5e-27 126.3 104 61.5
BcaC08g44817 Brassica carinata HOM05D003729 ORTHO05D004384 2.9e-26 123.2 104 59.6
C06p24040 Brassica napus HOM05D003729 ORTHO05D004384 1.1e-25 121.3 119 53.8
BolC6t37563H Brassica oleracea HOM05D003729 ORTHO05D004384 1.9e-25 120.6 104 58.7
Pp3c18_60 Physcomitrium patens HOM05D003729 ORTHO05D004384 4.7e-24 115.9 229 31.9
MCO06G073 Micromonas commoda HOM05D003729 ORTHO05D004384 8.0e-24 115.2 105 49.5
SHI38377 Sapria himalayana HOM05D003729 ORTHO05D004384 1.0e-23 114.8 62 90.3
SHI53576 Sapria himalayana HOM05D003729 ORTHO05D004384 5.2e-23 112.5 62 90.3
BcaB02g07627 Brassica carinata HOM05D003729 ORTHO05D004384 2.6e-22 110.2 104 56.7
CBR_g12410 Chara braunii HOM05D003729 ORTHO05D004384 4.4e-22 109.4 105 43.8
Haze_16233 Corylus avellana HOM05D003729 ORTHO05D004384 8.3e-21 105.1 189 38.1
SHI50183 Sapria himalayana HOM05D003729 ORTHO05D004384 3.2e-20 103.2 132 48.5
Thecc.05G137800 Theobroma cacao HOM05D003729 ORTHO05D004384 4.1e-20 102.8 71 69.0
Cre03.g159950 Chlamydomonas reinhardtii HOM05D003729 ORTHO05D004384 3.5e-19 99.8 105 42.9
QL07p009838 Quercus lobata HOM05D003729 ORTHO05D004384 5.9e-19 99.0 64 73.4
PRCOL_00000752 Prasinoderma coloniale HOM05D003729 ORTHO05D004384 7.8e-19 98.6 100 45.0
AUR62022314 Chenopodium quinoa HOM05D000534 ORTHO05D000389 1.0e-18 98.2 75 58.7
Thecc.05G137700 Theobroma cacao HOM05D003729 ORTHO05D004384 3.9e-18 96.3 71 64.8
Haze_16235 Corylus avellana HOM05D003729 ORTHO05D004384 9.5e-17 91.7 60 71.7
AUR62016564 Chenopodium quinoa HOM05D003729 ORTHO05D004384 4.7e-16 89.4 66 65.2
TPR.G32867 Trifolium pratense HOM05D003729 ORTHO05D004384 4.7e-16 89.4 63 63.5
SHI45329 Sapria himalayana HOM05D003729 ORTHO05D004384 6.2e-16 89.0 49 87.8
arahy.Tifrunner.gnm1.ann1.7FD8QN Arachis hypogaea HOM05D003729 ORTHO05D004384 1.5e-14 84.3 61 63.9
Glyma.03G135700 Glycine max HOM05D003729 ORTHO05D004384 8.3e-13 78.6 59 57.6
SHI46293 Sapria himalayana HOM05D003729 ORTHO05D004384 6.0e-11 72.4 32 100.0
SHI48244 Sapria himalayana HOM05D003729 ORTHO05D004384 2.3e-10 70.5 32 96.9
SHI45328 Sapria himalayana HOM05D003729 ORTHO05D004384 1.2e-08 64.7 31 93.5
SHI51181 Sapria himalayana HOM05D003729 ORTHO05D004384 1.1e-07 61.6 29 96.6
SHI54010 Sapria himalayana HOM05D003729 ORTHO05D004384 1.8e-07 60.8 62 56.5
vmacro10989 Vaccinium macrocarpon HOM05D003729 ORTHO05D004384 1.8e-07 60.8 31 77.4
FvH4_3g33711 Fragaria vesca HOM05D003729 ORTHO05D001837 2.3e-07 60.5 99 36.4
SHI45339 Sapria himalayana HOM05D003729 ORTHO05D004384 8.9e-07 58.5 29 96.6
Sabra06G0025400 Salix brachista HOM05D003729 ORTHO05D004384 1.2e-06 58.2 31 74.2
SHI44106 Sapria himalayana HOM05D003729 ORTHO05D367167 3.4e-06 56.6 28 96.4
Cfa025239 Carpinus fangiana HOM05D003729 ORTHO05D004384 9.9e-06 55.1 105 27.6


User provided reference genes

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