Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI46915 Sapria himalayana HOM05D003467 ORTHO05D004220 6.8e-240 833.6 417 100.0
SHI52904 Sapria himalayana HOM05D003467 ORTHO05D004220 7.4e-109 398.3 205 95.6
Nn1g10002 Nelumbo nucifera HOM05D003467 ORTHO05D004220 8.7e-102 374.8 284 73.9
SHI51351 Sapria himalayana HOM05D003467 ORTHO05D004220 1.1e-99 367.9 237 81.9
CANSAT16G0031 Cannabis sativa HOM05D003467 ORTHO05D004220 1.8e-99 367.1 295 71.2
SHI53305 Sapria himalayana HOM05D003467 ORTHO05D004220 3.4e-98 362.8 286 71.3
Actinidia34926 Actinidia chinensis HOM05D003467 ORTHO05D004220 7.6e-98 361.7 294 69.7
Lj2C1229G12 Lonicera japonica HOM05D003467 ORTHO05D004220 1.3e-97 360.9 294 68.7
ClCG11G007180 Citrullus lanatus HOM05D003467 ORTHO05D004220 6.5e-97 358.6 294 69.0
SHI40343 Sapria himalayana HOM05D003467 ORTHO05D004220 7.1e-96 355.1 265 74.0
SHI37961 Sapria himalayana HOM05D003467 ORTHO05D004220 2.7e-95 353.2 265 73.6
Sed0026029 Sechium edule HOM05D003467 ORTHO05D004220 7.9e-95 351.7 296 67.9
SHI36699 Sapria himalayana HOM05D003467 ORTHO05D004220 5.1e-94 349.0 271 72.3
MBI16_g09480_MAGBIO Magnolia biondii HOM05D003467 ORTHO05D004220 6.7e-94 348.6 324 63.0
Dinv06674 Davidia involucrata HOM05D003467 ORTHO05D004220 1.1e-91 341.3 295 67.5
CARHR282930 Cardamine hirsuta HOM05D003467 ORTHO05D004220 2.2e-89 333.6 349 59.3
SHI53641 Sapria himalayana HOM05D003467 ORTHO05D004220 8.5e-89 331.6 241 73.9
AT2G07715 Arabidopsis thaliana HOM05D003467 ORTHO05D004220 2.5e-88 330.1 349 59.0
SHI37886 Sapria himalayana HOM05D003467 ORTHO05D004220 3.2e-88 329.7 248 73.8
AL3G44370 Arabidopsis lyrata HOM05D003467 ORTHO05D004220 4.2e-88 329.3 349 59.0
BNapus_Darmor_BZH_scaffold_234p00200 Brassica napus HOM05D003467 ORTHO05D004220 9.3e-88 328.2 349 58.7
BolSC28t60347H Brassica oleracea HOM05D003467 ORTHO05D004220 9.3e-88 328.2 349 58.7
BraSC48t46273Z Brassica rapa HOM05D003467 ORTHO05D004220 9.3e-88 328.2 349 58.7
Sp3g25530 Schrenkiella parvula HOM05D003467 ORTHO05D004220 1.2e-87 327.8 349 58.5
CsaV3_UNG208190 Cucumis sativus L. HOM05D003467 ORTHO05D004220 2.7e-87 326.6 297 63.3
Solyc00g500228.1 Solanum lycopersicum HOM05D003467 ORTHO05D004220 2.7e-87 326.6 297 65.0
SGA_v2.0_scaffold255G45505 Striga asiatica HOM05D003467 ORTHO05D004220 3.0e-86 323.2 273 65.2
SabraMtG0006300 Salix brachista HOM05D003467 ORTHO05D004220 3.9e-86 322.8 290 65.2
Rhsim07G0055600 Rhododendron simsii HOM05D003467 ORTHO05D004220 9.7e-85 318.2 287 64.5
SHI37556 Sapria himalayana HOM05D003467 ORTHO05D004220 1.3e-84 317.8 262 68.3
Sed0025530 Sechium edule HOM05D003467 ORTHO05D004220 6.3e-84 315.5 285 64.2
SHI37209 Sapria himalayana HOM05D003467 ORTHO05D004220 1.4e-83 314.3 230 73.0
ATMG00560 Arabidopsis thaliana HOM05D003467 ORTHO05D004220 5.3e-83 312.4 299 62.5
SHI37866 Sapria himalayana HOM05D003467 ORTHO05D004220 5.3e-83 312.4 249 69.9
SHI38192 Sapria himalayana HOM05D003467 ORTHO05D004220 1.2e-82 311.2 207 79.2
BcaC08g43711 Brassica carinata HOM05D003467 ORTHO05D004220 4.5e-82 309.3 299 61.9
Thhalv10013769m.g Eutrema salsugineum HOM05D003467 ORTHO05D004220 5.0e-81 305.8 368 53.8
SHI52927 Sapria himalayana HOM05D003467 ORTHO05D004220 1.4e-80 304.3 248 69.4
SHI38317 Sapria himalayana HOM05D003467 ORTHO05D004220 1.2e-79 301.2 257 67.3
SHI51177 Sapria himalayana HOM05D003467 ORTHO05D004220 1.0e-78 298.1 231 70.1
SHI52601 Sapria himalayana HOM05D003467 ORTHO05D004220 2.3e-78 297.0 199 78.9
SHI42055 Sapria himalayana HOM05D003467 ORTHO05D004220 6.7e-78 295.4 230 70.9
Aa31csc239G20 Aethionema arabicum HOM05D003467 ORTHO05D004220 3.3e-77 293.1 300 60.3
Solyc00g500103.1 Solanum lycopersicum HOM05D003467 ORTHO05D004220 4.4e-77 292.7 273 63.4
Peaxi162Scf00507g00009 Petunia axillaris HOM05D003467 ORTHO05D004220 2.0e-74 283.9 293 58.4
unitig_87.g27965 Utricularia gibba HOM05D003467 ORTHO05D004220 8.5e-73 278.5 294 57.8
SHI52008 Sapria himalayana HOM05D003467 ORTHO05D004220 1.2e-71 274.6 227 66.5
CDE02G2877 Ceratophyllum demersum HOM05D003467 ORTHO05D004220 8.8e-70 268.5 474 40.9
SHI50250 Sapria himalayana HOM05D003467 ORTHO05D004220 3.3e-69 266.5 278 57.9
Ciclev10005397m.g Citrus clementina HOM05D003467 ORTHO05D004220 5.3e-67 259.2 322 50.0
SHI36967 Sapria himalayana HOM05D003467 ORTHO05D004220 7.7e-66 255.4 163 78.5
SHI52074 Sapria himalayana HOM05D003467 ORTHO05D004220 1.7e-65 254.2 241 61.0
Nitab4.5_0004471g0080 Nicotiana tabacum HOM05D003467 ORTHO05D004220 7.2e-64 248.8 295 53.6
BolC4t23495H Brassica oleracea HOM05D003467 ORTHO05D004220 1.6e-63 247.7 243 61.3
SHI43968 Sapria himalayana HOM05D003467 ORTHO05D004220 2.3e-62 243.8 163 76.7
SHI52974 Sapria himalayana HOM05D003467 ORTHO05D004220 2.3e-62 243.8 206 67.5
SHI36996 Sapria himalayana HOM05D003467 ORTHO05D004220 4.0e-62 243.0 148 79.7
SHI38898 Sapria himalayana HOM05D003467 ORTHO05D004220 2.0e-61 240.7 244 60.2
Nitab4.5_0009709g0060 Nicotiana tabacum HOM05D003467 ORTHO05D004220 2.6e-61 240.4 297 50.2
SGA_v2.0_scaffold507G52535 Striga asiatica HOM05D003467 ORTHO05D004220 1.3e-60 238.0 134 86.6
Peaxi162Scf00197g00034 Petunia axillaris HOM05D003467 ORTHO05D004220 1.5e-56 224.6 218 60.1
Sed0002506 Sechium edule HOM05D003467 ORTHO05D004220 2.1e-55 220.7 232 55.6
CAN.G134.20 Capsicum annuum HOM05D003467 ORTHO05D004220 1.4e-54 218.0 299 46.5
SHI37879 Sapria himalayana HOM05D003467 ORTHO05D004220 1.8e-54 217.6 235 58.3
SHI38047 Sapria himalayana HOM05D003467 ORTHO05D004220 2.3e-54 217.2 236 58.1
CAN.G502.14 Capsicum annuum HOM05D003467 ORTHO05D004220 3.0e-54 216.9 255 52.9
Manes.02G141800 Manihot esculenta HOM05D003467 ORTHO05D004220 5.2e-54 216.1 261 49.8
SHI36997 Sapria himalayana HOM05D003467 ORTHO05D004220 6.8e-54 215.7 121 90.1
Aqoxy4G00639 Aquilegia oxysepala HOM05D003467 ORTHO05D004220 7.5e-53 212.2 243 53.1
Nitab4.5_0001796g0090 Nicotiana tabacum HOM05D003467 ORTHO05D004220 1.7e-52 211.1 230 55.7
SHI48358 Sapria himalayana HOM05D003467 ORTHO05D004220 4.8e-52 209.5 201 60.2
Nitab4.5_0001152g0330 Nicotiana tabacum HOM05D003467 ORTHO05D004220 1.2e-50 204.9 288 47.9
BcaC05g26882 Brassica carinata HOM05D003467 ORTHO05D004220 4.5e-50 203.0 297 50.8
Sopen05g012590 Solanum pennellii HOM05D003467 ORTHO05D004220 1.3e-49 201.4 193 61.1
HanXRQChr14g0459301 Helianthus annuus HOM05D003467 ORTHO05D004220 1.2e-47 194.9 288 41.0
Sc16g0002730 Simmondsia chinensis HOM05D003467 ORTHO05D004220 3.6e-47 193.4 257 47.1
BcaC05g26874 Brassica carinata HOM05D003467 ORTHO05D004220 2.3e-46 190.7 221 56.1
COL.COLO4_18957 Corchorus olitorius HOM05D003467 ORTHO05D004220 6.8e-46 189.1 278 47.1
EL10Ac6g15561 Beta vulgaris HOM05D003467 ORTHO05D004220 3.4e-45 186.8 251 45.0
Lsat_1_v5_gn_6_32340 Lactuca sativa HOM05D003467 ORTHO05D004220 2.2e-44 184.1 285 41.1
Hund13975 Selenicereus undatus HOM05D003467 ORTHO05D004220 6.3e-44 182.6 224 48.2
Nitab4.5_0009703g0010 Nicotiana tabacum HOM05D003467 ORTHO05D004220 5.4e-43 179.5 205 55.6
C09p21580 Brassica napus HOM05D003467 ORTHO05D004220 9.2e-43 178.7 175 60.6
Zm00001eb180350 Zea mays HOM05D000540 ORTHO05D000681 7.8e-42 175.6 207 47.3
Migut.N03022 Erythranthe guttata HOM05D003467 ORTHO05D004220 1.7e-41 174.5 237 45.6
MBI05_g05352_MAGBIO Magnolia biondii HOM05D003467 ORTHO05D004220 3.8e-41 173.3 154 62.3
PGSC0003DMG401008792 Solanum tuberosum HOM05D003467 ORTHO05D004220 6.6e-41 172.6 223 52.5
Atru.chr10.2291 Acer truncatum HOM05D003467 ORTHO05D004220 8.6e-41 172.2 202 57.4
BraSC77t46654Z Brassica rapa HOM05D003467 ORTHO05D004220 1.9e-40 171.0 176 59.7
Lsat_1_v5_gn_1_109980 Lactuca sativa HOM05D003467 ORTHO05D004220 3.3e-40 170.2 289 39.4
CAN.G1.25 Capsicum annuum HOM05D003467 ORTHO05D004220 4.3e-40 169.9 115 73.9
Oeu039080.1 Olea europaea HOM05D003467 ORTHO05D004220 1.2e-39 168.3 147 63.3
Glyma.08G365200 Glycine max HOM05D003467 ORTHO05D004220 2.1e-39 167.5 207 51.7
Nitab4.5_0012067g0060 Nicotiana tabacum HOM05D003467 ORTHO05D004220 8.0e-39 165.6 261 46.0
Lsat_1_v5_gn_2_118881 Lactuca sativa HOM05D003467 ORTHO05D004220 1.0e-38 165.2 279 39.8
Glyma.07G149151 Glycine max HOM05D003467 ORTHO05D004220 3.0e-38 163.7 207 51.2
BolC9t55063H Brassica oleracea HOM05D003467 ORTHO05D004220 4.0e-38 163.3 184 56.5
SHI38786 Sapria himalayana HOM05D003467 ORTHO05D004220 5.2e-38 162.9 106 81.1
Nitab4.5_0006602g0040 Nicotiana tabacum HOM05D003467 ORTHO05D004220 8.9e-38 162.2 205 50.7
SalBow7G2519 Salvia bowleyana HOM05D003467 ORTHO05D004220 4.4e-37 159.8 325 37.5
SalBow7G4829 Salvia bowleyana HOM05D003467 ORTHO05D004220 4.4e-37 159.8 325 37.5
Sopen06g007650 Solanum pennellii HOM05D003467 ORTHO05D004220 7.5e-37 159.1 115 71.3
ECA238G4840 Erigeron canadensis HOM05D000460 ORTHO05D000333 2.2e-36 157.5 249 41.0
SHI47986 Sapria himalayana HOM05D003467 ORTHO05D004220 2.9e-36 157.1 156 59.6
Manes.01G181900 Manihot esculenta HOM05D003467 ORTHO05D004220 3.7e-36 156.8 200 46.0
SalBow1G2953 Salvia bowleyana HOM05D003467 ORTHO05D004220 1.4e-35 154.8 253 42.7
Ah.04g149890 Amaranthus hybridus HOM05D003467 ORTHO05D004220 4.1e-35 153.3 243 41.6
Lalb_Chr04g0257431 Lupinus albus HOM05D003467 ORTHO05D004220 7.0e-35 152.5 211 46.4
Ca_04056_v3 Cicer arietinum L. HOM05D003467 ORTHO05D004220 7.8e-34 149.1 207 45.4
SHI44577 Sapria himalayana HOM05D003467 ORTHO05D004220 2.3e-33 147.5 84 84.5
SHI38986 Sapria himalayana HOM05D003467 ORTHO05D004220 3.9e-33 146.7 88 84.1
SalBow1G6425 Salvia bowleyana HOM05D003467 ORTHO05D004220 6.6e-33 146.0 253 41.9
SHI38985 Sapria himalayana HOM05D003467 ORTHO05D004220 1.9e-32 144.4 202 48.5
Phvul.008G005400 Phaseolus vulgaris HOM05D003467 ORTHO05D004220 5.6e-32 142.9 208 45.7
SHI44578 Sapria himalayana HOM05D003467 ORTHO05D004220 5.6e-32 142.9 88 79.5
SGA_v2.0_scaffold361G49910 Striga asiatica HOM05D003467 ORTHO05D004220 7.3e-32 142.5 91 80.2
SHI54334 Sapria himalayana HOM05D003467 ORTHO05D004220 1.6e-31 141.4 86 84.9
VMungo1383G2739 Vigna mungo HOM05D003467 ORTHO05D004220 2.8e-31 140.6 228 43.4
CDE02G4335 Ceratophyllum demersum HOM05D003467 ORTHO05D004220 4.7e-31 139.8 189 51.3
ATR0661G353 Amborella trichopoda HOM05D003467 ORTHO05D004220 8.0e-31 139.0 317 36.6
CAN.G1572.11 Capsicum annuum HOM05D003467 ORTHO05D004220 2.3e-30 137.5 107 70.1
CAN.G2141.7 Capsicum annuum HOM05D003467 ORTHO05D004220 2.3e-30 137.5 107 70.1
Nitab4.5_0002635g0050 Nicotiana tabacum HOM05D003467 ORTHO05D004220 2.3e-30 137.5 115 67.0
SHI42502 Sapria himalayana HOM05D003467 ORTHO05D004220 3.1e-30 137.1 86 82.6
CAN.G267.15 Capsicum annuum HOM05D003467 ORTHO05D004220 6.8e-30 136.0 167 54.5
AUR62007567 Chenopodium quinoa HOM05D003467 ORTHO05D004220 5.8e-29 132.9 195 43.1
ATR0660G011 Amborella trichopoda HOM05D003467 ORTHO05D004220 1.7e-28 131.3 89 76.4
AUR62004052 Chenopodium quinoa HOM05D003467 ORTHO05D004220 1.7e-28 131.3 195 42.6
Medtr7g007070 Medicago truncatula HOM05D003467 ORTHO05D004220 2.2e-28 131.0 214 42.5
SHI42501 Sapria himalayana HOM05D003467 ORTHO05D004220 3.7e-28 130.2 110 65.5
SHI34612 Sapria himalayana HOM05D003467 ORTHO05D004220 6.4e-28 129.4 73 86.3
Lj1g0022622 Lotus japonicus HOM05D003467 ORTHO05D004220 1.9e-27 127.9 218 40.4
Psat3g204920 Pisum sativum HOM05D003467 ORTHO05D004220 4.1e-27 126.7 171 47.4
SEGI_40930 Sequoiadendron giganteum HOM05D000540 ORTHO05D000681 7.0e-27 125.9 181 45.3
SHI37826 Sapria himalayana HOM05D003467 ORTHO05D004220 9.2e-27 125.6 79 79.7
Lsat_1_v5_gn_4_83901 Lactuca sativa HOM05D003467 ORTHO05D004220 6.0e-26 122.9 228 37.3
SHI43969 Sapria himalayana HOM05D003467 ORTHO05D004220 1.1e-24 118.6 66 84.8
Lsat_1_v5_gn_5_163900 Lactuca sativa HOM05D003467 ORTHO05D004220 1.5e-24 118.2 140 47.1
Lsat_1_v5_gn_3_81380 Lactuca sativa HOM05D003467 ORTHO05D004220 4.3e-24 116.7 116 55.2
Lsat_1_v5_gn_8_11861 Lactuca sativa HOM05D003467 ORTHO05D004220 1.6e-23 114.8 221 36.7
Lsat_1_v5_gn_1_70701 Lactuca sativa HOM05D003467 ORTHO05D004220 1.8e-22 111.3 114 51.8
Lsat_1_v5_gn_7_5320 Lactuca sativa HOM05D003467 ORTHO05D004220 2.6e-21 107.5 108 49.1
Nitab4.5_0004300g0280 Nicotiana tabacum HOM05D003467 ORTHO05D004220 3.4e-21 107.1 104 59.6
Lsat_1_v5_gn_3_78181 Lactuca sativa HOM05D003467 ORTHO05D004220 7.5e-21 105.9 105 49.5
Lsat_1_v5_gn_7_88480 Lactuca sativa HOM05D003467 ORTHO05D004220 4.9e-20 103.2 234 35.0
CAN.G676.26 Capsicum annuum HOM05D003467 ORTHO05D004220 6.4e-20 102.8 121 57.9
SHI34617 Sapria himalayana HOM05D003467 ORTHO05D004220 2.4e-19 100.9 57 89.5
SGA_v2.0_scaffold48G17845 Striga asiatica HOM05D003467 ORTHO05D004220 2.7e-18 97.4 55 83.6
Lsat_1_v5_gn_3_11941 Lactuca sativa HOM05D003467 ORTHO05D004220 4.6e-18 96.7 87 55.2
Lsat_1_v5_gn_9_41861 Lactuca sativa HOM05D003467 ORTHO05D004220 4.6e-18 96.7 105 48.6
SHI34611 Sapria himalayana HOM05D003467 ORTHO05D004220 5.1e-17 93.2 130 48.5
Lsat_1_v5_gn_4_71160 Lactuca sativa HOM05D003467 ORTHO05D004220 9.5e-16 89.0 106 46.2
CARHR288290 Cardamine hirsuta HOM05D003467 ORTHO05D004220 4.7e-15 86.7 137 44.5
Nitab4.5_0008578g0020 Nicotiana tabacum HOM05D003467 ORTHO05D004220 4.0e-14 83.6 60 73.3
SalBow1G5399 Salvia bowleyana HOM05D003467 ORTHO05D004220 1.5e-13 81.6 72 56.9
Nitab4.5_0000978g0040 Nicotiana tabacum HOM05D003467 ORTHO05D004220 7.6e-13 79.3 60 66.7
Nitab4.5_0002558g0130 Nicotiana tabacum HOM05D003467 ORTHO05D004220 7.6e-13 79.3 52 76.9
ATR0660G010 Amborella trichopoda HOM05D003467 ORTHO05D004220 1.3e-12 78.6 43 86.0
SalBow1G8419 Salvia bowleyana HOM05D003467 ORTHO05D004220 2.2e-12 77.8 155 36.8
Lsat_1_v5_gn_5_114100 Lactuca sativa HOM05D003467 ORTHO05D004220 3.8e-12 77.0 102 45.1
SHI47987 Sapria himalayana HOM05D003467 ORTHO05D020467 1.4e-11 75.1 39 82.1
SHI54720 Sapria himalayana HOM05D003467 ORTHO05D004220 1.4e-11 75.1 46 84.8
SHI13008 Sapria himalayana HOM05D003467 ORTHO05D004220 1.2e-10 72.0 47 74.5
Atru.chr10.2290 Acer truncatum HOM05D003467 ORTHO05D004220 2.1e-10 71.2 47 76.6
CAN.G1447.9 Capsicum annuum HOM05D003467 ORTHO05D004220 4.6e-10 70.1 54 68.5
CAN.G76.4 Capsicum annuum HOM05D003467 ORTHO05D004220 1.7e-09 68.2 58 63.8
Solyc08g022180.1 Solanum lycopersicum HOM05D005034 ORTHO05D006234 1.7e-09 68.2 79 45.6
SHI04750 Sapria himalayana HOM05D000330 ORTHO05D000209 6.6e-09 66.2 175 36.0
Solyc02g092280.1 Solanum lycopersicum HOM05D003467 ORTHO05D004220 1.1e-08 65.5 44 75.0
arahy.Tifrunner.gnm1.ann1.F19KU9 Arachis hypogaea HOM05D003467 ORTHO05D004220 2.5e-08 64.3 194 31.4
MCO06G213 Micromonas commoda HOM05D000540 ORTHO05D000681 2.5e-08 64.3 71 49.3
MELO3C032707.2 Cucumis melo HOM05D000263 ORTHO05D000213 3.3e-08 63.9 48 70.8
Lsat_1_v5_gn_5_28101 Lactuca sativa HOM05D003467 ORTHO05D004220 1.2e-07 62.0 202 32.7
SHI27341 Sapria himalayana HOM05D003467 ORTHO05D004220 1.2e-07 62.0 44 75.0
BcaC08g43708 Brassica carinata HOM05D011356 ORTHO05D013405 3.6e-07 60.5 73 50.7
AL3G44330 Arabidopsis lyrata HOM05D011356 ORTHO05D013405 6.2e-07 59.7 73 50.7
SHI38787 Sapria himalayana HOM05D003467 ORTHO05D020467 6.2e-07 59.7 35 74.3
Aa31csc553G60 Aethionema arabicum HOM05D011356 ORTHO05D013405 1.8e-06 58.2 60 60.0
Psat0s1330g0400 Pisum sativum HOM05D008580 ORTHO05D010833 4.0e-06 57.0 57 61.4
Haze_26884 Corylus avellana HOM05D000540 ORTHO05D000681 5.2e-06 56.6 72 44.4
SalBow2G3554 Salvia bowleyana HOM05D000482 ORTHO05D004220 6.9e-06 56.2 32 84.4


User provided reference genes

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