Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI38898 Sapria himalayana HOM05D003467 ORTHO05D004220 5.3e-131 471.1 247 100.0
SHI53305 Sapria himalayana HOM05D003467 ORTHO05D004220 3.6e-103 378.6 262 76.3
SHI37961 Sapria himalayana HOM05D003467 ORTHO05D004220 1.1e-99 367.1 263 74.9
SHI53641 Sapria himalayana HOM05D003467 ORTHO05D004220 1.1e-99 367.1 248 77.0
SHI40343 Sapria himalayana HOM05D003467 ORTHO05D004220 4.1e-99 365.2 263 74.5
SHI37866 Sapria himalayana HOM05D003467 ORTHO05D004220 7.5e-93 344.4 249 74.3
SHI37556 Sapria himalayana HOM05D003467 ORTHO05D004220 5.2e-86 321.6 261 68.2
SHI42055 Sapria himalayana HOM05D003467 ORTHO05D004220 2.8e-84 315.8 236 72.0
SHI51351 Sapria himalayana HOM05D003467 ORTHO05D004220 3.5e-82 308.9 245 70.2
SHI36699 Sapria himalayana HOM05D003467 ORTHO05D004220 3.8e-81 305.4 268 65.3
Sed0025530 Sechium edule HOM05D003467 ORTHO05D004220 1.1e-80 303.9 260 65.8
Nn1g10002 Nelumbo nucifera HOM05D003467 ORTHO05D004220 2.5e-80 302.8 270 65.2
CANSAT16G0031 Cannabis sativa HOM05D003467 ORTHO05D004220 1.2e-79 300.4 273 63.0
ClCG11G007180 Citrullus lanatus HOM05D003467 ORTHO05D004220 1.6e-79 300.1 271 64.2
Sed0026029 Sechium edule HOM05D003467 ORTHO05D004220 2.1e-79 299.7 271 63.1
Lj2C1229G12 Lonicera japonica HOM05D003467 ORTHO05D004220 2.8e-79 299.3 275 62.9
SHI52974 Sapria himalayana HOM05D003467 ORTHO05D004220 1.5e-77 293.5 191 80.1
SHI37209 Sapria himalayana HOM05D003467 ORTHO05D004220 2.6e-77 292.7 242 65.7
SGA_v2.0_scaffold255G45505 Striga asiatica HOM05D003467 ORTHO05D004220 9.8e-77 290.8 268 61.2
SHI38317 Sapria himalayana HOM05D003467 ORTHO05D004220 1.3e-76 290.4 245 66.9
Peaxi162Scf00507g00009 Petunia axillaris HOM05D003467 ORTHO05D004220 5.4e-75 285.0 260 64.2
Actinidia34926 Actinidia chinensis HOM05D003467 ORTHO05D004220 9.2e-75 284.3 272 61.0
SHI37886 Sapria himalayana HOM05D003467 ORTHO05D004220 9.2e-75 284.3 235 67.7
CsaV3_UNG208190 Cucumis sativus L. HOM05D003467 ORTHO05D004220 9.5e-72 274.2 273 60.4
SabraMtG0006300 Salix brachista HOM05D003467 ORTHO05D004220 9.5e-72 274.2 282 58.9
MBI16_g09480_MAGBIO Magnolia biondii HOM05D003467 ORTHO05D004220 1.2e-71 273.9 313 54.0
SHI48358 Sapria himalayana HOM05D003467 ORTHO05D004220 1.6e-71 273.5 193 75.6
Dinv06674 Davidia involucrata HOM05D003467 ORTHO05D004220 3.6e-71 272.3 249 63.1
SHI52927 Sapria himalayana HOM05D003467 ORTHO05D004220 6.4e-68 261.5 234 65.8
Solyc00g500228.1 Solanum lycopersicum HOM05D003467 ORTHO05D004220 8.3e-68 261.2 272 56.6
SHI38192 Sapria himalayana HOM05D003467 ORTHO05D004220 2.0e-66 256.5 218 66.5
BcaC08g43711 Brassica carinata HOM05D003467 ORTHO05D004220 1.0e-65 254.2 281 55.9
BNapus_Darmor_BZH_scaffold_234p00200 Brassica napus HOM05D003467 ORTHO05D004220 5.6e-64 248.4 275 56.0
BolSC28t60347H Brassica oleracea HOM05D003467 ORTHO05D004220 5.6e-64 248.4 275 56.0
BraSC48t46273Z Brassica rapa HOM05D003467 ORTHO05D004220 5.6e-64 248.4 275 56.0
Sp3g25530 Schrenkiella parvula HOM05D003467 ORTHO05D004220 5.6e-64 248.4 275 56.0
CARHR282930 Cardamine hirsuta HOM05D003467 ORTHO05D004220 7.3e-64 248.1 275 55.6
Rhsim07G0055600 Rhododendron simsii HOM05D003467 ORTHO05D004220 1.2e-63 247.3 274 55.5
ATMG00560 Arabidopsis thaliana HOM05D003467 ORTHO05D004220 4.7e-63 245.4 281 54.8
SHI52074 Sapria himalayana HOM05D003467 ORTHO05D004220 6.2e-63 245.0 207 66.7
SHI46915 Sapria himalayana HOM05D003467 ORTHO05D004220 2.3e-62 243.0 244 60.2
SHI52601 Sapria himalayana HOM05D003467 ORTHO05D004220 4.0e-62 242.3 210 65.7
Solyc00g500103.1 Solanum lycopersicum HOM05D003467 ORTHO05D004220 4.0e-62 242.3 238 59.7
AT2G07715 Arabidopsis thaliana HOM05D003467 ORTHO05D004220 3.4e-61 239.2 275 54.5
Aa31csc239G20 Aethionema arabicum HOM05D003467 ORTHO05D004220 9.8e-61 237.7 283 54.4
AL3G44370 Arabidopsis lyrata HOM05D003467 ORTHO05D004220 1.3e-60 237.3 275 54.5
SHI52008 Sapria himalayana HOM05D003467 ORTHO05D004220 6.4e-60 235.0 231 58.9
Thhalv10013769m.g Eutrema salsugineum HOM05D003467 ORTHO05D004220 1.9e-59 233.4 268 53.7
unitig_87.g27965 Utricularia gibba HOM05D003467 ORTHO05D004220 6.0e-58 228.4 263 55.1
Nitab4.5_0004471g0080 Nicotiana tabacum HOM05D003467 ORTHO05D004220 1.7e-57 226.9 246 55.7
SHI37879 Sapria himalayana HOM05D003467 ORTHO05D004220 2.3e-57 226.5 235 58.3
SHI38047 Sapria himalayana HOM05D003467 ORTHO05D004220 3.0e-57 226.1 236 58.1
CDE02G2877 Ceratophyllum demersum HOM05D003467 ORTHO05D004220 5.8e-53 211.8 460 37.0
SHI38786 Sapria himalayana HOM05D003467 ORTHO05D004220 9.9e-53 211.1 160 72.5
SHI52904 Sapria himalayana HOM05D003467 ORTHO05D004220 7.8e-50 201.4 218 58.3
BolC4t23495H Brassica oleracea HOM05D003467 ORTHO05D004220 2.3e-49 199.9 225 55.1
Nitab4.5_0009709g0060 Nicotiana tabacum HOM05D003467 ORTHO05D004220 2.3e-49 199.9 254 50.4
Peaxi162Scf00197g00034 Petunia axillaris HOM05D003467 ORTHO05D004220 3.9e-49 199.1 203 57.6
Ciclev10005397m.g Citrus clementina HOM05D003467 ORTHO05D004220 3.3e-48 196.1 274 46.0
CAN.G502.14 Capsicum annuum HOM05D003467 ORTHO05D004220 1.2e-47 194.1 254 47.2
SHI50250 Sapria himalayana HOM05D003467 ORTHO05D004220 1.2e-47 194.1 195 56.4
SGA_v2.0_scaffold507G52535 Striga asiatica HOM05D003467 ORTHO05D004220 5.8e-45 185.3 138 72.5
Nitab4.5_0001152g0330 Nicotiana tabacum HOM05D003467 ORTHO05D004220 6.4e-44 181.8 252 48.0
Sed0002506 Sechium edule HOM05D003467 ORTHO05D004220 6.4e-44 181.8 151 67.5
SHI36967 Sapria himalayana HOM05D003467 ORTHO05D004220 1.1e-43 181.0 157 63.7
Nitab4.5_0001796g0090 Nicotiana tabacum HOM05D003467 ORTHO05D004220 1.4e-43 180.6 200 55.0
SHI36996 Sapria himalayana HOM05D003467 ORTHO05D004220 2.4e-43 179.9 163 60.1
SHI51177 Sapria himalayana HOM05D003467 ORTHO05D004220 2.7e-42 176.4 218 50.0
Sopen05g012590 Solanum pennellii HOM05D003467 ORTHO05D004220 6.6e-41 171.8 171 56.7
CAN.G134.20 Capsicum annuum HOM05D003467 ORTHO05D004220 4.0e-38 162.5 183 50.8
SHI38985 Sapria himalayana HOM05D003467 ORTHO05D004220 5.8e-37 158.7 128 68.8
PGSC0003DMG401008792 Solanum tuberosum HOM05D003467 ORTHO05D004220 5.4e-35 152.1 152 58.6
SHI34611 Sapria himalayana HOM05D003467 ORTHO05D004220 9.3e-35 151.4 90 85.6
SHI43968 Sapria himalayana HOM05D003467 ORTHO05D004220 7.9e-34 148.3 145 57.9
MBI05_g05352_MAGBIO Magnolia biondii HOM05D003467 ORTHO05D004220 1.7e-33 147.1 203 47.8
Aqoxy4G00639 Aquilegia oxysepala HOM05D003467 ORTHO05D004220 3.9e-33 146.0 227 42.3
Oeu039080.1 Olea europaea HOM05D003467 ORTHO05D004220 3.9e-33 146.0 157 54.1
Nitab4.5_0009703g0010 Nicotiana tabacum HOM05D003467 ORTHO05D004220 4.3e-32 142.5 165 53.3
Manes.02G141800 Manihot esculenta HOM05D003467 ORTHO05D004220 1.6e-31 140.6 243 39.9
Sopen06g007650 Solanum pennellii HOM05D003467 ORTHO05D004220 1.6e-31 140.6 168 50.6
SHI38986 Sapria himalayana HOM05D003467 ORTHO05D004220 2.1e-31 140.2 85 83.5
SHI44578 Sapria himalayana HOM05D003467 ORTHO05D004220 3.6e-31 139.4 85 80.0
ATR0661G353 Amborella trichopoda HOM05D003467 ORTHO05D004220 8.1e-31 138.3 317 37.2
SHI36997 Sapria himalayana HOM05D003467 ORTHO05D004220 1.4e-30 137.5 104 71.2
CDE02G4335 Ceratophyllum demersum HOM05D003467 ORTHO05D004220 9.9e-29 131.3 192 47.9
CAN.G1.25 Capsicum annuum HOM05D003467 ORTHO05D004220 6.4e-28 128.6 156 50.0
ECA238G4840 Erigeron canadensis HOM05D000460 ORTHO05D000333 6.4e-28 128.6 215 39.5
HanXRQChr14g0459301 Helianthus annuus HOM05D003467 ORTHO05D004220 6.4e-28 128.6 269 34.6
SHI34612 Sapria himalayana HOM05D003467 ORTHO05D004220 1.4e-27 127.5 74 83.8
BcaC05g26882 Brassica carinata HOM05D003467 ORTHO05D004220 7.1e-27 125.2 228 43.0
SHI44577 Sapria himalayana HOM05D003467 ORTHO05D004220 7.1e-27 125.2 103 66.0
Sc16g0002730 Simmondsia chinensis HOM05D003467 ORTHO05D004220 9.3e-27 124.8 246 37.0
ATR0660G011 Amborella trichopoda HOM05D003467 ORTHO05D004220 2.7e-26 123.2 111 64.0
Nitab4.5_0006602g0040 Nicotiana tabacum HOM05D003467 ORTHO05D004220 7.9e-26 121.7 205 43.4
COL.COLO4_18957 Corchorus olitorius HOM05D003467 ORTHO05D004220 1.3e-25 120.9 237 42.6
SHI47986 Sapria himalayana HOM05D003467 ORTHO05D004220 3.9e-25 119.4 91 69.2
EL10Ac6g15561 Beta vulgaris HOM05D003467 ORTHO05D004220 5.1e-25 119.0 216 36.6
SHI42501 Sapria himalayana HOM05D003467 ORTHO05D004220 8.7e-25 118.2 127 54.3
Hund13975 Selenicereus undatus HOM05D003467 ORTHO05D004220 8.7e-25 118.2 221 36.7
BcaC05g26874 Brassica carinata HOM05D003467 ORTHO05D004220 1.5e-24 117.5 206 45.1
C09p21580 Brassica napus HOM05D003467 ORTHO05D004220 1.3e-23 114.4 89 67.4
Migut.N03022 Erythranthe guttata HOM05D003467 ORTHO05D004220 2.1e-23 113.6 245 37.1
SHI37826 Sapria himalayana HOM05D003467 ORTHO05D004220 3.7e-23 112.8 75 76.0
BraSC77t46654Z Brassica rapa HOM05D003467 ORTHO05D004220 4.8e-23 112.5 155 47.7
Ah.04g149890 Amaranthus hybridus HOM05D003467 ORTHO05D004220 1.1e-22 111.3 239 33.1
BolC9t55063H Brassica oleracea HOM05D003467 ORTHO05D004220 3.4e-21 106.3 94 63.8
Atru.chr10.2291 Acer truncatum HOM05D003467 ORTHO05D004220 1.0e-20 104.8 204 40.2
Lsat_1_v5_gn_1_109980 Lactuca sativa HOM05D003467 ORTHO05D004220 1.3e-20 104.4 267 32.6
Lsat_1_v5_gn_6_32340 Lactuca sativa HOM05D003467 ORTHO05D004220 1.7e-20 104.0 269 30.9
Nitab4.5_0012067g0060 Nicotiana tabacum HOM05D003467 ORTHO05D004220 4.9e-20 102.4 215 36.3
SalBow7G2519 Salvia bowleyana HOM05D003467 ORTHO05D004220 8.4e-20 101.7 227 37.0
SalBow7G4829 Salvia bowleyana HOM05D003467 ORTHO05D004220 8.4e-20 101.7 227 37.0
SalBow1G2953 Salvia bowleyana HOM05D003467 ORTHO05D004220 1.2e-18 97.8 256 34.8
SGA_v2.0_scaffold48G17845 Striga asiatica HOM05D003467 ORTHO05D004220 1.2e-18 97.8 78 66.7
Nitab4.5_0002635g0050 Nicotiana tabacum HOM05D003467 ORTHO05D004220 6.0e-18 95.5 85 62.4
SHI42502 Sapria himalayana HOM05D003467 ORTHO05D004220 1.0e-17 94.7 91 60.4
SHI43969 Sapria himalayana HOM05D003467 ORTHO05D004220 3.9e-17 92.8 90 56.7
Zm00001eb180350 Zea mays HOM05D000540 ORTHO05D000681 3.9e-17 92.8 200 33.0
SHI34617 Sapria himalayana HOM05D003467 ORTHO05D004220 8.7e-17 91.7 44 97.7
Manes.01G181900 Manihot esculenta HOM05D003467 ORTHO05D004220 7.4e-16 88.6 200 35.0
SHI54334 Sapria himalayana HOM05D003467 ORTHO05D004220 9.6e-16 88.2 111 52.3
SHI04750 Sapria himalayana HOM05D000330 ORTHO05D000209 1.3e-15 87.8 177 39.5
CAN.G676.26 Capsicum annuum HOM05D003467 ORTHO05D004220 1.6e-15 87.4 62 72.6
CARHR288290 Cardamine hirsuta HOM05D003467 ORTHO05D004220 1.6e-15 87.4 91 57.1
Lsat_1_v5_gn_2_118881 Lactuca sativa HOM05D003467 ORTHO05D004220 2.1e-15 87.0 265 30.2
Glyma.08G365200 Glycine max HOM05D003467 ORTHO05D004220 3.7e-15 86.3 185 37.3
Phvul.008G005400 Phaseolus vulgaris HOM05D003467 ORTHO05D004220 3.7e-15 86.3 205 32.7
Lalb_Chr04g0257431 Lupinus albus HOM05D003467 ORTHO05D004220 6.3e-15 85.5 179 39.1
SalBow1G6425 Salvia bowleyana HOM05D003467 ORTHO05D004220 6.3e-15 85.5 254 33.1
Glyma.07G149151 Glycine max HOM05D003467 ORTHO05D004220 1.4e-14 84.3 185 36.8
VMungo1383G2739 Vigna mungo HOM05D003467 ORTHO05D004220 1.4e-14 84.3 207 32.9
Solyc02g092280.1 Solanum lycopersicum HOM05D003467 ORTHO05D004220 4.1e-14 82.8 52 76.9
Nitab4.5_0008578g0020 Nicotiana tabacum HOM05D003467 ORTHO05D004220 5.3e-14 82.4 62 71.0
ATR0660G010 Amborella trichopoda HOM05D003467 ORTHO05D004220 3.4e-13 79.7 108 48.1
SGA_v2.0_scaffold361G49910 Striga asiatica HOM05D003467 ORTHO05D004220 2.9e-12 76.6 44 86.4
CAN.G267.15 Capsicum annuum HOM05D003467 ORTHO05D004220 8.4e-12 75.1 47 78.7
Lsat_1_v5_gn_8_11861 Lactuca sativa HOM05D003467 ORTHO05D004220 8.4e-12 75.1 206 30.6
CAN.G1572.11 Capsicum annuum HOM05D003467 ORTHO05D004220 1.1e-11 74.7 47 76.6
CAN.G2141.7 Capsicum annuum HOM05D003467 ORTHO05D004220 1.1e-11 74.7 47 76.6
Lsat_1_v5_gn_5_163900 Lactuca sativa HOM05D003467 ORTHO05D004220 1.4e-11 74.3 112 42.0
Ca_04056_v3 Cicer arietinum L. HOM05D003467 ORTHO05D004220 2.5e-11 73.6 184 33.2
Lsat_1_v5_gn_4_83901 Lactuca sativa HOM05D003467 ORTHO05D004220 3.2e-11 73.2 103 40.8
SHI54720 Sapria himalayana HOM05D003467 ORTHO05D004220 4.2e-11 72.8 36 97.2
Nitab4.5_0000978g0040 Nicotiana tabacum HOM05D003467 ORTHO05D004220 7.2e-11 72.0 53 67.9
CAN.G1447.9 Capsicum annuum HOM05D003467 ORTHO05D004220 2.1e-10 70.5 55 69.1
Lsat_1_v5_gn_7_88480 Lactuca sativa HOM05D003467 ORTHO05D004220 2.7e-10 70.1 98 43.9
AUR62004052 Chenopodium quinoa HOM05D003467 ORTHO05D004220 4.6e-10 69.3 205 29.3
AUR62007567 Chenopodium quinoa HOM05D003467 ORTHO05D004220 6.1e-10 68.9 204 28.9
Lsat_1_v5_gn_7_5320 Lactuca sativa HOM05D003467 ORTHO05D004220 6.1e-10 68.9 47 63.8
Lsat_1_v5_gn_1_70701 Lactuca sativa HOM05D003467 ORTHO05D004220 7.9e-10 68.6 68 51.5
Psat3g204920 Pisum sativum HOM05D003467 ORTHO05D004220 7.9e-10 68.6 45 80.0
Lsat_1_v5_gn_3_81380 Lactuca sativa HOM05D003467 ORTHO05D004220 1.3e-09 67.8 103 40.8
Lsat_1_v5_gn_3_78181 Lactuca sativa HOM05D003467 ORTHO05D004220 1.8e-09 67.4 47 66.0
Medtr7g007070 Medicago truncatula HOM05D003467 ORTHO05D004220 1.8e-09 67.4 181 32.0
Lsat_1_v5_gn_3_11941 Lactuca sativa HOM05D003467 ORTHO05D004220 3.0e-09 66.6 47 66.0
Lj1g0022622 Lotus japonicus HOM05D003467 ORTHO05D004220 3.0e-09 66.6 45 73.3
SEGI_40930 Sequoiadendron giganteum HOM05D000540 ORTHO05D000681 3.9e-09 66.2 46 71.7
unitig_22.g5752 Utricularia gibba HOM05D003467 ORTHO05D004220 1.1e-08 64.7 75 48.0
SHI13008 Sapria himalayana HOM05D003467 ORTHO05D004220 1.5e-08 64.3 48 66.7
vmacro02728 Vaccinium macrocarpon HOM05D006061 ORTHO05D007450 1.9e-08 63.9 35 85.7
Lsat_1_v5_gn_9_41861 Lactuca sativa HOM05D003467 ORTHO05D004220 4.3e-08 62.8 47 61.7
Solyc08g022180.1 Solanum lycopersicum HOM05D005034 ORTHO05D006234 8.2e-07 58.5 84 41.7
Atru.chr10.2290 Acer truncatum HOM05D003467 ORTHO05D004220 1.8e-06 57.4 32 84.4
Lsat_1_v5_gn_5_28101 Lactuca sativa HOM05D003467 ORTHO05D004220 2.4e-06 57.0 98 43.9


User provided reference genes

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