Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI35305 Sapria himalayana HOM05D003517 ORTHO05D009798 2.3e-96 355.5 172 100.0
Solyc00g021640.2 Solanum lycopersicum HOM05D003517 ORTHO05D009798 5.6e-63 244.6 173 74.0
Lj2P1236T76 Lonicera japonica HOM05D003517 ORTHO05D009798 9.6e-63 243.8 174 73.0
CAN.G110.13 Capsicum annuum HOM05D003517 ORTHO05D009798 1.6e-62 243.0 173 74.0
Lj5g0015285 Lotus japonicus HOM05D003517 ORTHO05D009798 2.8e-62 242.3 175 73.1
LjContig00439g0008559 Lotus japonicus HOM05D003517 ORTHO05D009798 2.8e-62 242.3 175 73.1
Lalb_Chr00c24g0406771 Lupinus albus HOM05D003517 ORTHO05D009798 4.0e-61 238.4 175 72.6
Medtr0082s0030 Medicago truncatula HOM05D003517 ORTHO05D009798 4.0e-61 238.4 178 71.9
RcHm_v2.0_MTg0499001 Rosa chinensis HOM05D003517 ORTHO05D009798 5.2e-61 238.0 174 71.3
Nn1g10026 Nelumbo nucifera HOM05D003517 ORTHO05D009798 3.4e-60 235.3 174 71.3
Nn1g10028 Nelumbo nucifera HOM05D003517 ORTHO05D009798 3.4e-60 235.3 174 71.3
DCAR_032455 Daucus carota HOM05D003517 ORTHO05D009798 4.4e-60 235.0 177 70.6
Ca_14831_v3 Cicer arietinum L. HOM05D003517 ORTHO05D009798 1.3e-59 233.4 170 72.4
Nitab4.5_0010559g0050 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.3e-59 233.4 168 72.6
arahy.Tifrunner.gnm1.ann1.PT41Y0 Arachis hypogaea HOM05D003517 ORTHO05D009798 1.9e-58 229.6 175 70.9
CsaV3_UNG208660 Cucumis sativus L. HOM05D003517 ORTHO05D009798 1.9e-58 229.6 174 70.1
Eucgr.C02512 Eucalyptus grandis HOM05D003517 ORTHO05D009798 1.9e-58 229.6 174 69.0
VMungo0985G0017 Vigna mungo HOM05D003517 ORTHO05D009798 1.9e-58 229.6 175 69.7
SGA_v2.0_scaffold420G51390 Striga asiatica HOM05D003517 ORTHO05D009798 2.4e-58 229.2 175 69.7
Peaxi162Scf00456g00032 Petunia axillaris HOM05D003517 ORTHO05D009794 6.0e-57 224.6 168 70.8
Nitab4.5_0003784g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 2.3e-56 222.6 167 69.5
Thhalv10023100m.g Eutrema salsugineum HOM05D003517 ORTHO05D009798 8.7e-56 220.7 178 70.8
A04p09560 Brassica napus HOM05D003517 ORTHO05D009798 1.5e-55 219.9 178 70.8
BolSC28t60322H Brassica oleracea HOM05D003517 ORTHO05D009798 1.5e-55 219.9 178 70.8
BraSC48t46302Z Brassica rapa HOM05D003517 ORTHO05D009798 1.5e-55 219.9 178 70.8
AT2G07734 Arabidopsis thaliana HOM05D003517 ORTHO05D009798 3.3e-55 218.8 178 70.2
ATMG00290 Arabidopsis thaliana HOM05D003517 ORTHO05D009798 3.3e-55 218.8 178 70.2
Hma1.2p1_0020F.1_g014210 Hydrangea macrophylla HOM05D003517 ORTHO05D009798 4.3e-55 218.4 153 73.9
MBI05_g23322_MAGBIO Magnolia biondii HOM05D003517 ORTHO05D009798 4.3e-55 218.4 175 66.9
BraSC48t46288Z Brassica rapa HOM05D003517 ORTHO05D009798 1.3e-54 216.9 179 70.9
Zm00001eb436030 Zea mays HOM05D003517 ORTHO05D009798 5.4e-50 201.4 186 59.1
SabraMtG0002700 Salix brachista HOM05D000890 ORTHO05D000697 7.9e-49 197.6 149 70.5
TPR.G36113 Trifolium pratense HOM05D003517 ORTHO05D009798 1.0e-48 197.2 146 71.2
unitig_87.g28026 Utricularia gibba HOM05D003517 ORTHO05D009798 3.0e-48 195.7 198 57.1
GSVIVG01006669001 Vitis vinifera HOM05D003517 ORTHO05D009798 3.3e-47 192.2 174 61.5
Lsat_1_v5_gn_7_67721 Lactuca sativa HOM05D003517 ORTHO05D009798 1.6e-46 189.9 150 64.7
HanXRQChr16g0504301 Helianthus annuus HOM05D003517 ORTHO05D009798 2.8e-46 189.1 150 64.7
HanXRQMTg0579381 Helianthus annuus HOM05D003517 ORTHO05D009798 2.8e-46 189.1 150 64.7
Gorai.001G161800 Gossypium raimondii HOM05D003517 ORTHO05D009798 1.5e-39 166.8 144 66.0
Nitab4.5_0003945g0030 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.9e-39 166.4 139 63.3
Sp3g25550 Schrenkiella parvula HOM05D003517 ORTHO05D009798 7.4e-39 164.5 148 66.2
Eucgr.H02717 Eucalyptus grandis HOM05D003517 ORTHO05D009798 1.5e-36 156.8 114 68.4
Oeu013683.1 Olea europaea HOM05D003517 ORTHO05D009798 3.4e-36 155.6 163 54.6
Zm00001eb438110 Zea mays HOM05D003517 ORTHO05D009798 3.8e-35 152.1 152 55.9
Zm00001eb438970 Zea mays HOM05D003517 ORTHO05D009798 3.8e-35 152.1 152 55.9
Zm00001eb439050 Zea mays HOM05D003517 ORTHO05D009798 3.8e-35 152.1 152 55.9
Zm00001eb440630 Zea mays HOM05D003517 ORTHO05D009798 3.8e-35 152.1 152 55.9
Nitab4.5_0000172g2130 Nicotiana tabacum HOM05D003517 ORTHO05D009798 2.1e-33 146.4 137 60.6
Nitab4.5_0000172g1090 Nicotiana tabacum HOM05D003517 ORTHO05D009794 1.4e-26 123.6 137 51.1
HanXRQChr10g0310901 Helianthus annuus HOM05D003517 ORTHO05D009798 1.3e-24 117.1 86 69.8
BraSC48t46337Z Brassica rapa HOM05D003517 ORTHO05D009798 9.7e-23 110.9 85 72.9
Zm00001eb384400 Zea mays HOM05D003517 ORTHO05D009798 9.7e-23 110.9 75 73.3
CAN.G85.23 Capsicum annuum HOM05D003517 ORTHO05D009798 1.4e-21 107.1 61 85.2
Nitab4.5_0001152g1080 Nicotiana tabacum HOM05D003517 ORTHO05D009798 4.1e-21 105.5 84 67.9
Solyc10g045740.2 Solanum lycopersicum HOM05D003517 ORTHO05D009798 2.5e-18 96.3 94 54.3
Nitab4.5_0001152g0030 Nicotiana tabacum HOM05D003517 ORTHO05D009794 2.1e-17 93.2 108 52.8
Nitab4.5_0001152g0480 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.4e-16 90.5 167 37.7
Dinv18903 Davidia involucrata HOM05D003517 ORTHO05D009798 3.0e-16 89.4 50 88.0
SEGI_36410 Sequoiadendron giganteum HOM05D003517 ORTHO05D009798 1.1e-15 87.4 160 41.9
PSO063G7170 Papaver somniferum HOM05D003517 ORTHO05D009798 2.0e-15 86.7 87 54.0
Solyc11g030935.1 Solanum lycopersicum HOM05D003517 ORTHO05D009798 2.2e-14 83.2 99 54.5
PSO585G0042 Papaver somniferum HOM05D003517 ORTHO05D009798 2.8e-14 82.8 87 51.7
Nitab4.5_0008059g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 4.1e-13 79.0 48 81.2
PGSC0003DMG400033608 Solanum tuberosum HOM05D003517 ORTHO05D009798 1.2e-12 77.4 44 86.4
PSO339G1469 Papaver somniferum HOM05D003517 ORTHO05D009798 5.9e-12 75.1 95 47.4
CARHR287140 Cardamine hirsuta HOM05D003517 ORTHO05D009798 7.7e-12 74.7 40 90.0
PSO513G0171 Papaver somniferum HOM05D003517 ORTHO05D009798 2.2e-11 73.2 95 45.3
Lalb_Chr22g0353791 Lupinus albus HOM05D003517 ORTHO05D009798 6.5e-11 71.6 58 62.1
SHI20129 Sapria himalayana HOM05D003517 ORTHO05D009798 2.1e-09 66.6 53 64.2
Nitab4.5_0006196g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.1e-07 60.8 46 67.4
CAN.G1109.3 Capsicum annuum HOM05D003517 ORTHO05D009798 3.7e-06 55.8 28 89.3
BolSC28t60424H Brassica oleracea HOM05D003517 ORTHO05D009798 4.8e-06 55.5 27 92.6
Hma1.2p1_0020F.1_g014220 Hydrangea macrophylla HOM05D003517 ORTHO05D009798 6.3e-06 55.1 32 81.2


User provided reference genes

Program Settings