Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI33974 Sapria himalayana HOM05D006955 ORTHO05D008701 2.4e-198 695.3 348 100.0
Manes.14G100100 Manihot esculenta HOM05D006955 ORTHO05D008701 4.7e-77 292.4 197 75.1
Gohir.A13G053700 Gossypium hirsutum HOM05D006955 ORTHO05D008701 9.9e-75 284.6 213 69.0
Gohir.D13G071200 Gossypium hirsutum HOM05D006955 ORTHO05D008701 9.9e-75 284.6 213 69.0
Gorai.013G081500 Gossypium raimondii HOM05D006955 ORTHO05D008701 1.7e-74 283.9 213 69.0
Potri.008G118800 Populus trichocarpa HOM05D006955 ORTHO05D008701 1.1e-73 281.2 213 67.6
Actinidia14871 Actinidia chinensis HOM05D006955 ORTHO05D008701 9.3e-73 278.1 198 70.2
TWI79G1443 Tripterygium wilfordii HOM05D006955 ORTHO05D008701 1.2e-72 277.7 213 67.1
RcHm_v2.0_Chr4g0435501 Rosa chinensis HOM05D006955 ORTHO05D008701 1.6e-72 277.3 213 66.2
vmacro01371 Vaccinium macrocarpon HOM05D006955 ORTHO05D008701 1.6e-72 277.3 202 68.8
Rhsim12G0082400 Rhododendron simsii HOM05D006955 ORTHO05D008701 7.8e-72 275.0 209 66.5
CANSAT56G1672 Cannabis sativa HOM05D006955 ORTHO05D008701 1.0e-71 274.6 213 66.2
FAN07G1824 Fragaria x ananassa HOM05D006955 ORTHO05D008701 5.1e-71 272.3 221 62.4
SGA_v2.0_scaffold124G33553 Striga asiatica HOM05D006955 ORTHO05D008701 6.6e-71 271.9 217 65.0
Ca_28012_v3 Cicer arietinum L. HOM05D006955 ORTHO05D008701 8.7e-71 271.6 213 64.8
Lalb_Chr17g0342031 Lupinus albus HOM05D006955 ORTHO05D008701 1.5e-70 270.8 198 69.2
Lj3C1017T15 Lonicera japonica HOM05D006955 ORTHO05D008701 3.3e-70 269.6 198 68.2
TPR.G38250 Trifolium pratense HOM05D006955 ORTHO05D008701 4.3e-70 269.2 213 65.7
Prupe.1G308500 Prunus persica HOM05D006955 ORTHO05D008701 9.6e-70 268.1 198 69.2
VMungo1215G2393 Vigna mungo HOM05D006955 ORTHO05D008701 9.6e-70 268.1 200 67.0
MSTRG.13515 Avicennia marina HOM05D006955 ORTHO05D008701 1.3e-69 267.7 207 65.7
Dinv21110 Davidia involucrata HOM05D006955 ORTHO05D008701 1.6e-69 267.3 213 64.3
Actinidia16638 Actinidia chinensis HOM05D006955 ORTHO05D008701 2.1e-69 266.9 198 67.7
CSS0004457 Camellia sinensis var. sinensis HOM05D006955 ORTHO05D008701 2.1e-69 266.9 198 68.2
arahy.Tifrunner.gnm1.ann1.FS5FM4 Arachis hypogaea HOM05D006955 ORTHO05D008701 2.8e-69 266.5 213 64.8
Sabra08G0090200 Salix brachista HOM05D006955 ORTHO05D008701 2.8e-69 266.5 213 62.9
MELO3C012231.2 Cucumis melo HOM05D006955 ORTHO05D008701 3.6e-69 266.2 213 62.4
DCAR_023669 Daucus carota HOM05D006955 ORTHO05D008701 3.6e-69 266.2 198 67.2
Nn3g17799 Nelumbo nucifera HOM05D006955 ORTHO05D008701 3.6e-69 266.2 198 68.7
Psat2g093000 Pisum sativum HOM05D006955 ORTHO05D008701 3.6e-69 266.2 198 68.7
Aqoxy3G00330 Aquilegia oxysepala HOM05D006955 ORTHO05D008701 4.8e-69 265.8 198 66.7
Phvul.002G082400 Phaseolus vulgaris HOM05D006955 ORTHO05D008701 4.8e-69 265.8 213 63.8
Sp1g11840 Schrenkiella parvula HOM05D006955 ORTHO05D008701 4.8e-69 265.8 220 59.1
Glyma.08G260400 Glycine max HOM05D006955 ORTHO05D008701 6.2e-69 265.4 213 64.3
PSO017G5158 Papaver somniferum HOM05D006955 ORTHO05D008701 6.2e-69 265.4 198 68.2
GSVIVG01011919001 Vitis vinifera HOM05D006955 ORTHO05D008701 6.2e-69 265.4 223 62.3
arahy.Tifrunner.gnm1.ann1.0188KY Arachis hypogaea HOM05D006955 ORTHO05D008701 8.1e-69 265.0 213 64.8
arahy.Tifrunner.gnm1.ann1.5TE0FE Arachis hypogaea HOM05D006955 ORTHO05D008701 8.1e-69 265.0 213 64.8
Eucgr.G02335 Eucalyptus grandis HOM05D006955 ORTHO05D008701 1.1e-68 264.6 212 63.7
Haze_17460 Corylus avellana HOM05D006955 ORTHO05D008701 1.8e-68 263.8 212 63.7
Migut.L01079 Erythranthe guttata HOM05D006955 ORTHO05D008701 1.8e-68 263.8 199 66.8
Lj2g0004168 Lotus japonicus HOM05D006955 ORTHO05D008701 1.8e-68 263.8 212 64.6
Medtr5g055150 Medicago truncatula HOM05D006955 ORTHO05D008701 4.0e-68 262.7 213 64.8
Cc11_g10340 Coffea canephora HOM05D006955 ORTHO05D008701 5.3e-68 262.3 197 67.5
COL.COLO4_07900 Corchorus olitorius HOM05D006955 ORTHO05D008701 9.0e-68 261.5 213 63.4
FAN22G1329 Fragaria x ananassa HOM05D006955 ORTHO05D008701 9.0e-68 261.5 213 63.8
PSO478G1614 Papaver somniferum HOM05D006955 ORTHO05D008701 1.5e-67 260.8 198 66.7
AUR62002894 Chenopodium quinoa HOM05D006955 ORTHO05D008701 2.6e-67 260.0 198 64.1
SalBow8G1483 Salvia bowleyana HOM05D006955 ORTHO05D008701 2.6e-67 260.0 202 65.3
ATR0665G168 Amborella trichopoda HOM05D006955 ORTHO05D008701 3.4e-67 259.6 201 64.2
ECA233G4186 Erigeron canadensis HOM05D006955 ORTHO05D008701 3.4e-67 259.6 198 64.1
Sed0012161 Sechium edule HOM05D006955 ORTHO05D008701 5.8e-67 258.8 213 62.0
THA.LOC104805251 Tarenaya hassleriana HOM05D006955 ORTHO05D008701 5.8e-67 258.8 200 64.5
Hund25084 Selenicereus undatus HOM05D006955 ORTHO05D008701 7.6e-67 258.5 198 63.6
Lsat_1_v5_gn_8_38900 Lactuca sativa HOM05D006955 ORTHO05D008701 3.8e-66 256.1 189 67.2
CsaV3_5G034170 Cucumis sativus L. HOM05D006955 ORTHO05D008701 8.4e-66 255.0 213 60.6
Nitab4.5_0004895g0100 Nicotiana tabacum HOM05D006955 ORTHO05D008701 1.1e-65 254.6 198 64.6
Sc11g0003240 Simmondsia chinensis HOM05D006955 ORTHO05D008701 1.1e-65 254.6 198 62.6
Sc11g0003300 Simmondsia chinensis HOM05D006955 ORTHO05D008701 1.1e-65 254.6 198 62.6
FAN12G2251 Fragaria x ananassa HOM05D006955 ORTHO05D008701 2.4e-65 253.4 212 62.3
Thecc.02G357700 Theobroma cacao HOM05D006955 ORTHO05D008701 2.4e-65 253.4 191 68.1
FAN12G1265 Fragaria x ananassa HOM05D006955 ORTHO05D008701 3.2e-65 253.1 212 62.3
Glyma.01G083100 Glycine max HOM05D006955 ORTHO05D008701 4.2e-65 252.7 214 62.6
PGR119G2132 Punica granatum HOM05D006955 ORTHO05D008701 4.2e-65 252.7 213 62.4
Peaxi162Scf00382g00128 Petunia axillaris HOM05D006955 ORTHO05D008701 5.4e-65 252.3 198 64.1
TAR629G1122 Trochodendron aralioides HOM05D006955 ORTHO05D008701 7.1e-65 251.9 238 55.9
Oeu033300.1 Olea europaea HOM05D006955 ORTHO05D008701 9.3e-65 251.5 231 58.0
Atru.chr11.1296 Acer truncatum HOM05D006955 ORTHO05D008701 2.1e-64 250.4 212 59.9
EL10Ac6g14443 Beta vulgaris HOM05D006955 ORTHO05D008701 3.5e-64 249.6 198 62.1
Nitab4.5_0003823g0050 Nicotiana tabacum HOM05D006955 ORTHO05D008701 6.0e-64 248.8 196 62.8
MD16G1044800 Malus domestica HOM05D006955 ORTHO05D008701 1.0e-63 248.1 201 63.7
Ah.02g127040 Amaranthus hybridus HOM05D006955 ORTHO05D008701 3.0e-63 246.5 198 62.1
BolC5t29750H Brassica oleracea HOM05D006955 ORTHO05D008701 5.1e-63 245.7 196 60.7
Thhalv10008697m.g Eutrema salsugineum HOM05D006955 ORTHO05D008701 5.6e-62 242.3 213 56.3
MD13G1044000 Malus domestica HOM05D006955 ORTHO05D008701 2.1e-61 240.4 201 63.2
Duzib251G0691 Durio zibethinus HOM05D006955 ORTHO05D008701 6.2e-61 238.8 198 63.1
Ciclev10032679m.g Citrus clementina HOM05D006955 ORTHO05D008701 1.8e-60 237.3 213 57.7
QL01p043991 Quercus lobata HOM05D006955 ORTHO05D008701 1.8e-60 237.3 213 59.2
TAR622G0049 Trochodendron aralioides HOM05D006955 ORTHO05D008701 2.4e-60 236.9 198 62.1
CARHR013710 Cardamine hirsuta HOM05D006955 ORTHO05D008701 9.0e-60 235.0 208 56.2
HPP92_011092 Vanilla planifolia HOM05D006955 ORTHO05D008701 1.2e-59 234.6 200 58.5
HPP92_011108 Vanilla planifolia HOM05D006955 ORTHO05D008701 2.6e-59 233.4 200 58.0
Aa31LG1G1480 Aethionema arabicum HOM05D006955 ORTHO05D008701 7.6e-59 231.9 215 54.9
Cpa.g.sc1.190 Carica papaya HOM05D006955 ORTHO05D008701 7.6e-59 231.9 223 56.1
CiPaw.15G005500 Carya illinoinensis HOM05D006955 ORTHO05D008701 1.3e-58 231.1 176 65.3
ClCG05G022860 Citrullus lanatus HOM05D006955 ORTHO05D008701 1.3e-58 231.1 207 58.5
C05p09970 Brassica napus HOM05D006955 ORTHO05D008701 2.9e-58 229.9 213 53.5
AL1G25090 Arabidopsis lyrata HOM05D006955 ORTHO05D008701 3.2e-57 226.5 213 54.0
AT1G13330 Arabidopsis thaliana HOM05D006955 ORTHO05D008701 7.1e-57 225.3 213 53.5
SEGI_38068 Sequoiadendron giganteum HOM05D006955 ORTHO05D008701 9.3e-57 224.9 198 57.1
A06p08430 Brassica napus HOM05D006955 ORTHO05D008701 3.5e-56 223.0 213 52.6
BraA06t24039Z Brassica rapa HOM05D006955 ORTHO05D008701 3.5e-56 223.0 213 52.6
HanXRQChr08g0214231 Helianthus annuus HOM05D006955 ORTHO05D008701 4.6e-56 222.6 202 57.4
BcaC05g25057 Brassica carinata HOM05D006955 ORTHO05D008701 1.8e-55 220.7 213 52.1
BcaC05g25064 Brassica carinata HOM05D006955 ORTHO05D008701 1.8e-55 220.7 213 52.1
BolC5t29739H Brassica oleracea HOM05D006955 ORTHO05D008701 1.8e-55 220.7 213 52.1
AUR62035251 Chenopodium quinoa HOM05D006955 ORTHO05D008701 1.8e-55 220.7 198 57.1
Carub.0001s1306 Capsella rubella HOM05D006955 ORTHO05D008701 8.1e-53 211.8 213 51.6
CDE05G2755 Ceratophyllum demersum HOM05D006955 ORTHO05D008701 2.4e-52 210.3 211 54.0
Mapoly0015s0151 Marchantia polymorpha HOM05D006955 ORTHO05D008701 1.5e-51 207.6 197 53.3
Zm00001eb216450 Zea mays HOM05D006955 ORTHO05D008701 1.5e-51 207.6 188 53.2
Solyc05g009560.4 Solanum lycopersicum HOM05D006955 ORTHO05D008701 3.5e-48 196.4 198 52.0
Sopen05g005370 Solanum pennellii HOM05D006955 ORTHO05D008701 3.5e-48 196.4 198 52.0
SMO203G0092 Selaginella moellendorffii HOM05D006955 ORTHO05D008701 1.3e-47 194.5 194 49.0
CAN.G656.28 Capsicum annuum HOM05D006955 ORTHO05D008701 3.9e-47 193.0 198 51.0
CBR_g3130 Chara braunii HOM05D006955 ORTHO05D008701 1.8e-44 184.1 199 46.7
CAN.G706.23 Capsicum annuum HOM05D006955 ORTHO05D008701 1.5e-38 164.5 184 48.9
Pp3c23_21510 Physcomitrium patens HOM05D006955 ORTHO05D008701 9.7e-38 161.8 192 43.8
PGSC0003DMG402012965 Solanum tuberosum HOM05D006955 ORTHO05D008701 3.4e-35 153.3 133 55.6
unitig_27.g25246 Utricularia gibba HOM05D002984 ORTHO05D003561 3.1e-28 130.2 100 65.0
CAN.G884.17 Capsicum annuum HOM05D000526 ORTHO05D000956 4.1e-28 129.8 184 43.5
unitig_27.g25247 Utricularia gibba HOM05D006955 ORTHO05D008701 6.1e-24 115.9 90 60.0
Potri.010G127101 Populus trichocarpa HOM05D006955 ORTHO05D008701 5.3e-20 102.8 136 44.9
Cre06.g284400 Chlamydomonas reinhardtii HOM05D006955 ORTHO05D008701 1.0e-15 88.6 199 26.6
MCO07G460 Micromonas commoda HOM05D006955 ORTHO05D008701 6.3e-13 79.3 186 28.5
PRCOL_00000208 Prasinoderma coloniale HOM05D006955 ORTHO05D008701 4.2e-09 66.6 202 27.2
SHI26606 Sapria himalayana HOM05D002759 ORTHO05D003290 5.5e-09 66.2 37 83.8
SHI20242 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-08 65.1 68 51.5
SHI24815 Sapria himalayana HOM05D005129 ORTHO05D005585 2.7e-08 63.9 38 78.9
SHI11774 Sapria himalayana HOM05D012376 ORTHO05D006507 4.7e-08 63.2 38 78.9
SHI03833 Sapria himalayana HOM05D000002 ORTHO05D000001 6.1e-08 62.8 38 81.6
SHI06474 Sapria himalayana HOM05D001167 ORTHO05D001054 1.4e-07 61.6 42 69.0
SHI21104 Sapria himalayana HOM05D001130 ORTHO05D001052 1.4e-07 61.6 39 76.9
SHI03814 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-07 61.2 40 72.5
SHI08441 Sapria himalayana HOM05D012376 ORTHO05D003290 2.3e-07 60.8 38 76.3
SHI29807 Sapria himalayana HOM05D012376 ORTHO05D000014 3.0e-07 60.5 46 67.4
SHI04515 Sapria himalayana HOM05D012376 ORTHO05D002750 4.0e-07 60.1 38 76.3
SHI06012 Sapria himalayana HOM05D001959 ORTHO05D001955 1.2e-06 58.5 37 75.7
SHI16653 Sapria himalayana HOM05D012376 ORTHO05D009727 1.2e-06 58.5 46 63.0
SHI23047 Sapria himalayana HOM05D012376 ORTHO05D003975 1.2e-06 58.5 40 70.0
SHI12358 Sapria himalayana HOM05D005493 ORTHO05D007154 1.5e-06 58.2 40 70.0
SHI26413 Sapria himalayana HOM05D000002 ORTHO05D000001 2.0e-06 57.8 44 63.6
SHI26680 Sapria himalayana HOM05D000002 ORTHO05D000001 2.0e-06 57.8 66 48.5
SHI33201 Sapria himalayana HOM05D000175 ORTHO05D004574 2.0e-06 57.8 53 54.7
SHI14628 Sapria himalayana HOM05D000105 ORTHO05D000023 2.6e-06 57.4 38 73.7
SHI17237 Sapria himalayana HOM05D000139 ORTHO05D000103 2.6e-06 57.4 34 82.4
SHI23379 Sapria himalayana HOM05D000105 ORTHO05D000023 4.4e-06 56.6 42 66.7
SHI22474 Sapria himalayana HOM05D004374 ORTHO05D005430 5.7e-06 56.2 43 62.8


User provided reference genes

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