Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI32865 Sapria himalayana HOM05D005601 ORTHO05D007265 9.8e-82 306.6 141 100.0
Sabra10G0131500 Salix brachista HOM05D005601 ORTHO05D007265 2.7e-31 139.0 84 73.8
Potri.010G172300 Populus trichocarpa HOM05D005601 ORTHO05D007265 1.3e-30 136.7 84 71.4
Cc05_g16460 Coffea canephora HOM05D005601 ORTHO05D007265 3.0e-30 135.6 89 65.2
MD10G1210800 Malus domestica HOM05D005601 ORTHO05D007265 3.9e-30 135.2 83 67.5
GSVIVG01020400001 Vitis vinifera HOM05D005601 ORTHO05D007265 3.9e-30 135.2 83 68.7
CANSAT56G2459 Cannabis sativa HOM05D005601 ORTHO05D007265 5.1e-30 134.8 82 73.2
MD05G1234300 Malus domestica HOM05D005601 ORTHO05D007265 5.1e-30 134.8 83 68.7
Potri.008G084100 Populus trichocarpa HOM05D005601 ORTHO05D007265 6.7e-30 134.4 84 72.6
MELO3C012601.2 Cucumis melo HOM05D005601 ORTHO05D007265 8.7e-30 134.0 83 73.5
TAR627G0482 Trochodendron aralioides HOM05D005601 ORTHO05D007265 1.1e-29 133.7 82 69.5
ClCG09G022740 Citrullus lanatus HOM05D005601 ORTHO05D007265 1.5e-29 133.3 83 72.3
Sabra07G0054400 Salix brachista HOM05D005601 ORTHO05D007265 2.5e-29 132.5 84 71.4
Sed0023216 Sechium edule HOM05D005601 ORTHO05D007265 5.7e-29 131.3 83 72.3
Manes.14G007400 Manihot esculenta HOM05D005601 ORTHO05D007265 9.7e-29 130.6 83 67.5
Sabra07G0054100 Salix brachista HOM05D005601 ORTHO05D007265 9.7e-29 130.6 84 70.2
Sabra07G0055000 Salix brachista HOM05D005601 ORTHO05D007265 9.7e-29 130.6 84 70.2
Sabra07G0055500 Salix brachista HOM05D005601 ORTHO05D007265 9.7e-29 130.6 84 70.2
vmacro11692 Vaccinium macrocarpon HOM05D005601 ORTHO05D007265 2.2e-28 129.4 83 66.3
Sabra07G0054700 Salix brachista HOM05D005601 ORTHO05D007265 2.8e-28 129.0 84 69.0
CiPaw.11G059700 Carya illinoinensis HOM05D005601 ORTHO05D007265 3.7e-28 128.6 81 72.8
PGR031G2718 Punica granatum HOM05D005601 ORTHO05D007265 3.7e-28 128.6 83 67.5
Dinv42472 Davidia involucrata HOM05D005601 ORTHO05D007265 4.8e-28 128.3 83 66.3
CsaV3_7G022950 Cucumis sativus L. HOM05D005601 ORTHO05D007265 6.3e-28 127.9 83 68.7
FvH4_3g14650 Fragaria vesca HOM05D005601 ORTHO05D007265 6.3e-28 127.9 83 68.7
FAN16G1778 Fragaria x ananassa HOM05D005601 ORTHO05D007265 6.3e-28 127.9 83 68.7
TWI38G0323 Tripterygium wilfordii HOM05D005601 ORTHO05D007265 6.3e-28 127.9 82 67.1
FAN11G1412 Fragaria x ananassa HOM05D005601 ORTHO05D007265 8.2e-28 127.5 83 68.7
Nn7g38204 Nelumbo nucifera HOM05D005601 ORTHO05D007265 8.2e-28 127.5 83 60.2
Thecc.07G184900 Theobroma cacao HOM05D005601 ORTHO05D007265 8.2e-28 127.5 90 64.4
CSS0009872 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 1.1e-27 127.1 83 65.1
CSS0045419 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 1.1e-27 127.1 83 65.1
FAN21G2538 Fragaria x ananassa HOM05D005601 ORTHO05D007265 1.8e-27 126.3 83 67.5
Prupe.4G131800 Prunus persica HOM05D005601 ORTHO05D007265 1.8e-27 126.3 82 65.9
Eucgr.F04464 Eucalyptus grandis HOM05D005601 ORTHO05D007265 2.4e-27 125.9 83 67.5
Rhsim06G0242900 Rhododendron simsii HOM05D005601 ORTHO05D007265 2.4e-27 125.9 83 65.1
ATR0752G225 Amborella trichopoda HOM05D005601 ORTHO05D007265 9.1e-27 124.0 80 66.2
RcHm_v2.0_Chr5g0024141 Rosa chinensis HOM05D005601 ORTHO05D007265 1.2e-26 123.6 83 67.5
Dinv19582 Davidia involucrata HOM05D005601 ORTHO05D007265 1.5e-26 123.2 83 66.3
PSO675G6728 Papaver somniferum HOM05D005601 ORTHO05D007265 1.5e-26 123.2 83 62.7
MBI02_g08257_MAGBIO Magnolia biondii HOM05D005601 ORTHO05D007265 5.9e-26 121.3 83 60.2
PGSC0003DMG400022116 Solanum tuberosum HOM05D005601 ORTHO05D007265 5.9e-26 121.3 90 61.1
Peaxi162Scf00452g00334 Petunia axillaris HOM05D005601 ORTHO05D007265 7.7e-26 120.9 83 63.9
Solyc07g066640.3 Solanum lycopersicum HOM05D005601 ORTHO05D007265 1.3e-25 120.2 83 63.9
Sopen07g034790 Solanum pennellii HOM05D005601 ORTHO05D007265 1.3e-25 120.2 83 63.9
CAN.G943.56 Capsicum annuum HOM05D005601 ORTHO05D007265 2.9e-25 119.0 83 62.7
Aqoxy1G01411 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 5.0e-25 118.2 83 65.1
Nitab4.5_0000029g0250 Nicotiana tabacum HOM05D005601 ORTHO05D007265 5.0e-25 118.2 83 62.7
Ciclev10006846m.g Citrus clementina HOM05D005601 ORTHO05D007265 6.5e-25 117.9 83 63.9
Oeu019720.3 Olea europaea HOM05D005601 ORTHO05D007265 6.5e-25 117.9 82 64.6
Migut.M01519 Erythranthe guttata HOM05D005601 ORTHO05D007265 1.1e-24 117.1 83 60.2
Lj2A13G19 Lonicera japonica HOM05D005601 ORTHO05D007265 1.4e-24 116.7 83 60.2
Nitab4.5_0006109g0020 Nicotiana tabacum HOM05D005601 ORTHO05D007265 1.4e-24 116.7 83 61.4
QL04p090699 Quercus lobata HOM05D005601 ORTHO05D007265 1.9e-24 116.3 83 61.4
QL09p016707 Quercus lobata HOM05D005601 ORTHO05D007265 1.9e-24 116.3 83 61.4
Gohir.D13G129200 Gossypium hirsutum HOM05D005601 ORTHO05D007265 3.2e-24 115.5 83 62.7
Gorai.013G145200 Gossypium raimondii HOM05D005601 ORTHO05D007265 3.2e-24 115.5 83 62.7
DCAR_016842 Daucus carota HOM05D005601 ORTHO05D000532 7.2e-24 114.4 83 63.9
Thhalv10007775m.g Eutrema salsugineum HOM05D005601 ORTHO05D007265 9.4e-24 114.0 81 59.3
Sp1g14480 Schrenkiella parvula HOM05D005601 ORTHO05D007583 9.4e-24 114.0 81 59.3
AL1G28410 Arabidopsis lyrata HOM05D005601 ORTHO05D007265 1.2e-23 113.6 81 59.3
Carub.0001s1603 Capsella rubella HOM05D005601 ORTHO05D007265 1.2e-23 113.6 81 59.3
AT1G16290 Arabidopsis thaliana HOM05D005601 ORTHO05D007265 1.6e-23 113.2 81 59.3
Aa31LG7G820 Aethionema arabicum HOM05D005601 ORTHO05D007265 2.1e-23 112.8 81 60.5
MSTRG.7080 Avicennia marina HOM05D005601 ORTHO05D007265 2.1e-23 112.8 83 59.0
CARHR016760 Cardamine hirsuta HOM05D005601 ORTHO05D007265 2.1e-23 112.8 81 59.3
Lj3g0011890 Lotus japonicus HOM05D005601 ORTHO05D007265 2.1e-23 112.8 82 62.2
BcaB02g06608 Brassica carinata HOM05D005601 ORTHO05D007265 2.7e-23 112.5 81 58.0
BcaC05g25587 Brassica carinata HOM05D005601 ORTHO05D007265 4.6e-23 111.7 81 58.0
C05p14450 Brassica napus HOM05D005601 ORTHO05D007265 4.6e-23 111.7 81 58.0
BolC5t30171H Brassica oleracea HOM05D005601 ORTHO05D007265 4.6e-23 111.7 81 58.0
Gohir.A13G125400 Gossypium hirsutum HOM05D005601 ORTHO05D007265 4.6e-23 111.7 83 61.4
Atru.chr1.81 Acer truncatum HOM05D005601 ORTHO05D007265 6.1e-23 111.3 82 58.5
Sc09g0007790 Simmondsia chinensis HOM05D005601 ORTHO05D007265 6.1e-23 111.3 81 60.5
HPP92_016686 Vanilla planifolia HOM05D005601 ORTHO05D007265 6.1e-23 111.3 84 59.5
Gohir.A01G099600 Gossypium hirsutum HOM05D005601 ORTHO05D007265 7.9e-23 110.9 83 59.0
A06p12210 Brassica napus HOM05D005601 ORTHO05D007265 1.0e-22 110.5 81 56.8
BraA06t24389Z Brassica rapa HOM05D005601 ORTHO05D007265 1.0e-22 110.5 81 56.8
Oeu034984.1 Olea europaea HOM05D005601 ORTHO05D007265 1.0e-22 110.5 82 61.0
Gorai.002G109700 Gossypium raimondii HOM05D005601 ORTHO05D007265 1.8e-22 109.8 83 60.2
Sabra07G0055700 Salix brachista HOM05D005601 ORTHO05D007265 3.9e-22 108.6 71 70.4
SGA_v2.0_scaffold7G03617 Striga asiatica HOM05D005601 ORTHO05D007265 5.1e-22 108.2 83 57.8
Gohir.D01G084000 Gossypium hirsutum HOM05D005601 ORTHO05D007265 6.7e-22 107.8 82 59.8
arahy.Tifrunner.gnm1.ann1.5WL8RC Arachis hypogaea HOM05D005601 ORTHO05D007265 1.1e-21 107.1 80 58.8
SEGI_07478 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 1.1e-21 107.1 82 56.1
SalBow8G4673 Salvia bowleyana HOM05D005601 ORTHO05D007265 2.6e-21 105.9 83 54.2
Ca_03553_v3 Cicer arietinum L. HOM05D005601 ORTHO05D007265 3.7e-20 102.1 82 56.1
Ca_29556_v3 Cicer arietinum L. HOM05D005601 ORTHO05D007265 3.7e-20 102.1 82 56.1
Psat1g014320 Pisum sativum HOM05D005601 ORTHO05D007265 1.1e-19 100.5 80 56.2
Lalb_Chr25g0284511 Lupinus albus HOM05D005601 ORTHO05D007265 1.4e-19 100.1 82 54.9
SMO196G0059 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 2.4e-19 99.4 82 52.4
CBR_g32054 Chara braunii HOM05D005601 ORTHO05D007265 6.9e-19 97.8 79 51.9
Pp3c5_22590 Physcomitrium patens HOM05D005601 ORTHO05D007265 9.1e-19 97.4 82 50.0
Lalb_Chr20g0108481 Lupinus albus HOM05D005601 ORTHO05D007265 1.2e-18 97.1 82 56.1
Mapoly0008s0010 Marchantia polymorpha HOM05D005601 ORTHO05D007265 1.2e-18 97.1 82 48.8
SMO170G0006 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 1.7e-17 93.2 82 51.2
Zm00001eb207280 Zea mays HOM05D005601 ORTHO05D007265 1.7e-17 93.2 76 50.0
AagrBONN_evm.TU.Sc2ySwM_117.1218 Anthoceros agrestis HOM05D005601 ORTHO05D007265 2.9e-17 92.4 82 48.8
SMO137G0068 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 2.9e-17 92.4 82 50.0
TPR.G22999 Trifolium pratense HOM05D005601 ORTHO05D007265 4.2e-16 88.6 86 50.0
THA.LOC104812373 Tarenaya hassleriana HOM05D005601 ORTHO05D007265 9.4e-16 87.4 114 37.7
Aqoxy72s008 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 1.1e-11 73.9 87 47.1
Sabra08G0062400 Salix brachista HOM05D005601 ORTHO05D007265 1.3e-09 67.0 45 71.1
arahy.Tifrunner.gnm1.ann1.4IME1R Arachis hypogaea HOM05D005601 ORTHO05D007265 2.2e-09 66.2 54 51.9
HPP92_016685 Vanilla planifolia HOM05D005601 ORTHO05D007265 9.4e-08 60.8 52 50.0
Glyma.08G165100 Glycine max HOM05D005601 ORTHO05D007265 1.2e-07 60.5 52 57.7
ATR0752G040 Amborella trichopoda HOM05D005601 ORTHO05D007265 6.1e-07 58.2 52 48.1
CSS0035233 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 1.0e-06 57.4 52 57.7
Haze_07789 Corylus avellana HOM05D005601 ORTHO05D007265 1.0e-06 57.4 52 51.9
unitig_26.g10063 Utricularia gibba HOM05D005601 ORTHO05D007265 1.8e-06 56.6 80 40.0
Aqoxy4G01783 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 6.7e-06 54.7 87 36.8
Dinv19583 Davidia involucrata HOM05D005601 ORTHO05D007265 8.8e-06 54.3 53 54.7


User provided reference genes

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