Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI32862 Sapria himalayana HOM05D005601 ORTHO05D007265 1.8e-145 519.2 256 100.0
Cpa.g.sc32.54 Carica papaya HOM05D005601 ORTHO05D007265 2.2e-23 113.6 61 78.7
CANSAT56G2459 Cannabis sativa HOM05D005601 ORTHO05D007265 3.8e-23 112.8 61 80.3
Dinv19582 Davidia involucrata HOM05D005601 ORTHO05D007265 8.4e-23 111.7 83 60.2
vmacro11692 Vaccinium macrocarpon HOM05D005601 ORTHO05D007265 1.1e-22 111.3 74 67.6
MBI02_g08257_MAGBIO Magnolia biondii HOM05D005601 ORTHO05D007265 2.5e-22 110.2 62 74.2
ClCG09G022740 Citrullus lanatus HOM05D005601 ORTHO05D007265 4.2e-22 109.4 62 74.2
CiPaw.11G059700 Carya illinoinensis HOM05D005601 ORTHO05D007265 5.5e-22 109.0 61 75.4
MELO3C012601.2 Cucumis melo HOM05D005601 ORTHO05D007265 5.5e-22 109.0 61 75.4
CsaV3_7G022950 Cucumis sativus L. HOM05D005601 ORTHO05D007265 5.5e-22 109.0 61 75.4
Nn7g38204 Nelumbo nucifera HOM05D005601 ORTHO05D007265 5.5e-22 109.0 61 73.8
Rhsim06G0242900 Rhododendron simsii HOM05D005601 ORTHO05D007265 7.1e-22 108.6 61 73.8
Dinv42472 Davidia involucrata HOM05D005601 ORTHO05D007265 1.6e-21 107.5 61 75.4
Gorai.013G145200 Gossypium raimondii HOM05D005601 ORTHO05D007265 1.6e-21 107.5 65 69.2
Potri.010G172300 Populus trichocarpa HOM05D005601 ORTHO05D007265 1.6e-21 107.5 61 75.4
Sabra10G0131500 Salix brachista HOM05D005601 ORTHO05D007265 1.6e-21 107.5 61 75.4
Sp1g14480 Schrenkiella parvula HOM05D005601 ORTHO05D007583 1.6e-21 107.5 69 71.0
BcaB02g06608 Brassica carinata HOM05D005601 ORTHO05D007265 2.1e-21 107.1 69 69.6
BcaC05g25587 Brassica carinata HOM05D005601 ORTHO05D007265 2.1e-21 107.1 69 69.6
A06p12210 Brassica napus HOM05D005601 ORTHO05D007265 2.1e-21 107.1 69 69.6
C05p14450 Brassica napus HOM05D005601 ORTHO05D007265 2.1e-21 107.1 69 69.6
BolC5t30171H Brassica oleracea HOM05D005601 ORTHO05D007265 2.1e-21 107.1 69 69.6
BraA06t24389Z Brassica rapa HOM05D005601 ORTHO05D007265 2.1e-21 107.1 69 69.6
CSS0009872 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 2.1e-21 107.1 61 72.1
CSS0045419 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 2.1e-21 107.1 61 72.1
QL04p090699 Quercus lobata HOM05D005601 ORTHO05D007265 2.1e-21 107.1 61 73.8
QL09p016707 Quercus lobata HOM05D005601 ORTHO05D007265 2.1e-21 107.1 61 73.8
Carub.0001s1603 Capsella rubella HOM05D005601 ORTHO05D007265 3.5e-21 106.3 69 68.1
TAR627G0482 Trochodendron aralioides HOM05D005601 ORTHO05D007265 3.5e-21 106.3 61 72.1
Potri.008G084100 Populus trichocarpa HOM05D005601 ORTHO05D007265 6.0e-21 105.5 61 73.8
AL1G28410 Arabidopsis lyrata HOM05D005601 ORTHO05D007265 7.9e-21 105.1 69 66.7
AT1G16290 Arabidopsis thaliana HOM05D005601 ORTHO05D007265 7.9e-21 105.1 69 66.7
Thhalv10007775m.g Eutrema salsugineum HOM05D005601 ORTHO05D007265 7.9e-21 105.1 61 75.4
Oeu034984.1 Olea europaea HOM05D005601 ORTHO05D007265 7.9e-21 105.1 59 76.3
Sed0023216 Sechium edule HOM05D005601 ORTHO05D007265 7.9e-21 105.1 61 72.1
Solyc07g066640.3 Solanum lycopersicum HOM05D005601 ORTHO05D007265 7.9e-21 105.1 60 73.3
Sopen07g034790 Solanum pennellii HOM05D005601 ORTHO05D007265 7.9e-21 105.1 60 73.3
PGSC0003DMG400022116 Solanum tuberosum HOM05D005601 ORTHO05D007265 7.9e-21 105.1 60 73.3
GSVIVG01020400001 Vitis vinifera HOM05D005601 ORTHO05D007265 7.9e-21 105.1 61 70.5
Sabra08G0062400 Salix brachista HOM05D005601 ORTHO05D007265 1.0e-20 104.8 61 73.8
CARHR016760 Cardamine hirsuta HOM05D005601 ORTHO05D007265 1.3e-20 104.4 61 73.8
Manes.14G007400 Manihot esculenta HOM05D005601 ORTHO05D007265 1.3e-20 104.4 61 72.1
Migut.M01519 Erythranthe guttata HOM05D005601 ORTHO05D007265 1.8e-20 104.0 60 70.0
FvH4_3g14650 Fragaria vesca HOM05D005601 ORTHO05D007265 1.8e-20 104.0 61 72.1
FAN11G1412 Fragaria x ananassa HOM05D005601 ORTHO05D007265 1.8e-20 104.0 59 74.6
Gohir.A13G125400 Gossypium hirsutum HOM05D005601 ORTHO05D007265 1.8e-20 104.0 59 71.2
Gohir.D13G129200 Gossypium hirsutum HOM05D005601 ORTHO05D007265 1.8e-20 104.0 59 72.9
Thecc.07G184900 Theobroma cacao HOM05D005601 ORTHO05D007265 1.8e-20 104.0 59 71.2
PGR031G2718 Punica granatum HOM05D005601 ORTHO05D007265 3.0e-20 103.2 61 72.1
SalBow8G4673 Salvia bowleyana HOM05D005601 ORTHO05D007265 3.0e-20 103.2 63 65.1
SGA_v2.0_scaffold7G03617 Striga asiatica HOM05D005601 ORTHO05D007265 3.0e-20 103.2 59 69.5
TWI38G0323 Tripterygium wilfordii HOM05D005601 ORTHO05D007265 3.0e-20 103.2 59 74.6
unitig_26.g10062 Utricularia gibba HOM05D000493 ORTHO05D008479 5.1e-20 102.4 60 68.3
Aa31LG7G820 Aethionema arabicum HOM05D005601 ORTHO05D007265 8.7e-20 101.7 92 54.3
Aqoxy1G01411 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 8.7e-20 101.7 61 68.9
Aqoxy72s008 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 8.7e-20 101.7 61 68.9
Nitab4.5_0000029g0250 Nicotiana tabacum HOM05D005601 ORTHO05D007265 8.7e-20 101.7 60 70.0
Prupe.4G131800 Prunus persica HOM05D005601 ORTHO05D007265 8.7e-20 101.7 61 70.5
CAN.G943.56 Capsicum annuum HOM05D005601 ORTHO05D007265 1.1e-19 101.3 60 70.0
Gohir.A01G099600 Gossypium hirsutum HOM05D005601 ORTHO05D007265 1.1e-19 101.3 61 68.9
Lj3g0011890 Lotus japonicus HOM05D005601 ORTHO05D007265 1.1e-19 101.3 62 71.0
RcHm_v2.0_Chr5g0024141 Rosa chinensis HOM05D005601 ORTHO05D007265 1.1e-19 101.3 61 67.2
Sc09g0007790 Simmondsia chinensis HOM05D005601 ORTHO05D007265 1.1e-19 101.3 61 68.9
Ciclev10006846m.g Citrus clementina HOM05D005601 ORTHO05D007265 1.5e-19 100.9 61 65.6
MD10G1210800 Malus domestica HOM05D005601 ORTHO05D007265 1.5e-19 100.9 61 68.9
Medtr2g065540 Medicago truncatula HOM05D005601 ORTHO05D007265 1.5e-19 100.9 59 72.9
FAN21G2538 Fragaria x ananassa HOM05D005601 ORTHO05D007265 1.9e-19 100.5 61 70.5
Gorai.002G109700 Gossypium raimondii HOM05D005601 ORTHO05D007265 2.5e-19 100.1 61 67.2
THA.LOC104812373 Tarenaya hassleriana HOM05D005601 ORTHO05D007265 2.5e-19 100.1 69 63.8
Nitab4.5_0006109g0020 Nicotiana tabacum HOM05D005601 ORTHO05D007265 3.3e-19 99.8 60 68.3
HPP92_016686 Vanilla planifolia HOM05D005601 ORTHO05D007265 3.3e-19 99.8 61 67.2
Psat1g014320 Pisum sativum HOM05D005601 ORTHO05D007265 4.3e-19 99.4 61 70.5
Cc05_g16470 Coffea canephora HOM05D005601 ORTHO05D007265 5.7e-19 99.0 61 68.9
Peaxi162Scf00452g00334 Petunia axillaris HOM05D005601 ORTHO05D007265 7.4e-19 98.6 60 68.3
Atru.chr1.81 Acer truncatum HOM05D005601 ORTHO05D007265 9.7e-19 98.2 61 68.9
PSO675G6728 Papaver somniferum HOM05D005601 ORTHO05D007265 9.7e-19 98.2 61 67.2
Ca_03553_v3 Cicer arietinum L. HOM05D005601 ORTHO05D007265 1.3e-18 97.8 61 67.2
Ca_29556_v3 Cicer arietinum L. HOM05D005601 ORTHO05D007265 1.3e-18 97.8 61 67.2
Lalb_Chr25g0284511 Lupinus albus HOM05D005601 ORTHO05D007265 1.3e-18 97.8 61 67.2
Lalb_Chr20g0108481 Lupinus albus HOM05D005601 ORTHO05D007265 1.6e-18 97.4 61 70.5
Glyma.08G165100 Glycine max HOM05D005601 ORTHO05D007265 2.2e-18 97.1 61 68.9
MD05G1234300 Malus domestica HOM05D005601 ORTHO05D007265 2.8e-18 96.7 61 68.9
Zm00001eb207280 Zea mays HOM05D005601 ORTHO05D007265 4.8e-18 95.9 58 70.7
MSTRG.7080 Avicennia marina HOM05D005601 ORTHO05D007265 8.2e-18 95.1 60 63.3
Eucgr.F04464 Eucalyptus grandis HOM05D005601 ORTHO05D007265 8.2e-18 95.1 61 68.9
Lj2A13G19 Lonicera japonica HOM05D005601 ORTHO05D007265 1.1e-17 94.7 58 69.0
arahy.Tifrunner.gnm1.ann1.5WL8RC Arachis hypogaea HOM05D005601 ORTHO05D007265 1.4e-17 94.4 61 65.6
TPR.G22999 Trifolium pratense HOM05D005601 ORTHO05D007265 1.8e-17 94.0 60 66.7
DCAR_016842 Daucus carota HOM05D005601 ORTHO05D000532 4.1e-17 92.8 61 60.7
SEGI_02544 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 7.7e-16 88.6 61 63.9
FAN16G1778 Fragaria x ananassa HOM05D005601 ORTHO05D007265 1.0e-15 88.2 50 72.0
Pp3c5_22590 Physcomitrium patens HOM05D005601 ORTHO05D007265 8.5e-15 85.1 59 62.7
SMO196G0059 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 1.9e-14 84.0 56 60.7
SMO137G0068 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 2.5e-14 83.6 60 53.3
SMO170G0006 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 2.5e-14 83.6 60 53.3
Oeu019720.3 Olea europaea HOM05D005601 ORTHO05D007265 3.2e-14 83.2 48 70.8
CBR_g32054 Chara braunii HOM05D005601 ORTHO05D007265 3.3e-11 73.2 53 54.7
SHI32606 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-10 71.2 40 92.5
Mapoly0008s0010 Marchantia polymorpha HOM05D005601 ORTHO05D007265 4.1e-09 66.2 62 41.9
SEGI_07505 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 5.0e-07 59.3 74 43.2
ATR0752G173 Amborella trichopoda HOM05D005601 ORTHO05D007265 4.2e-06 56.2 69 36.2


User provided reference genes

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