Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI31844 Sapria himalayana HOM05D003148 ORTHO05D368793 3.4e-141 505.0 256 100.0
Sabra16G0286100 Salix brachista HOM05D003148 ORTHO05D003894 2.8e-10 70.1 86 45.3
Potri.001G421300 Populus trichocarpa HOM05D003148 ORTHO05D003894 1.4e-09 67.8 102 41.2
Sabra11G0122800 Salix brachista HOM05D003148 ORTHO05D003894 6.9e-09 65.5 184 29.9
Potri.011G136900 Populus trichocarpa HOM05D003148 ORTHO05D003894 1.2e-08 64.7 172 31.4
ATR0752G224 Amborella trichopoda HOM05D003148 ORTHO05D003894 3.4e-08 63.2 131 30.5
Haze_09651 Corylus avellana HOM05D003148 ORTHO05D003894 4.5e-08 62.8 104 36.5
ECA246G3119 Erigeron canadensis HOM05D003148 ORTHO05D003894 4.5e-08 62.8 58 53.4
Dinv40737 Davidia involucrata HOM05D003148 ORTHO05D003894 5.9e-08 62.4 221 26.2
QL08p011843 Quercus lobata HOM05D003148 ORTHO05D003894 5.9e-08 62.4 60 45.0
Atru.chr6.8 Acer truncatum HOM05D003148 ORTHO05D003894 7.7e-08 62.0 74 41.9
Thecc.07G043600 Theobroma cacao HOM05D003148 ORTHO05D003894 7.7e-08 62.0 71 46.5
CARHR096300 Cardamine hirsuta HOM05D003148 ORTHO05D003894 2.2e-07 60.5 80 43.8
Ah.13g076880 Amaranthus hybridus HOM05D001433 ORTHO05D005172 5.0e-07 59.3 138 31.2
C05p43810 Brassica napus HOM05D003148 ORTHO05D003894 5.0e-07 59.3 74 44.6
TWI38G0810 Tripterygium wilfordii HOM05D003148 ORTHO05D003894 5.0e-07 59.3 63 50.8
Cfa020382 Carpinus fangiana HOM05D003148 ORTHO05D003894 6.5e-07 58.9 104 34.6
A05p28320 Brassica napus HOM05D003148 ORTHO05D003894 8.5e-07 58.5 74 44.6
BraA05t21714Z Brassica rapa HOM05D003148 ORTHO05D003894 8.5e-07 58.5 74 44.6
Ciclev10007282m.g Citrus clementina HOM05D003148 ORTHO05D003894 8.5e-07 58.5 76 40.8
Cpa.g.sc97.33 Carica papaya HOM05D003148 ORTHO05D003894 1.1e-06 58.2 60 45.0
Psat5g183240 Pisum sativum HOM05D003148 ORTHO05D003894 1.1e-06 58.2 52 51.9
Sopen07g032480 Solanum pennellii HOM05D003148 ORTHO05D003894 1.1e-06 58.2 46 54.3
PGSC0003DMG402013919 Solanum tuberosum HOM05D003148 ORTHO05D003894 1.1e-06 58.2 46 54.3
Duzib213G0065 Durio zibethinus HOM05D003148 ORTHO05D003894 1.4e-06 57.8 58 51.7
Atru.chr2.3280 Acer truncatum HOM05D003148 ORTHO05D003894 1.9e-06 57.4 46 52.2
BolC5t33096H Brassica oleracea HOM05D003148 ORTHO05D003894 1.9e-06 57.4 74 43.2
Glyma.14G025300 Glycine max HOM05D003148 ORTHO05D003894 1.9e-06 57.4 54 50.0
Sp3g18540 Schrenkiella parvula HOM05D003148 ORTHO05D003894 1.9e-06 57.4 84 38.1
CsaV3_3G005270 Cucumis sativus L. HOM05D003148 ORTHO05D003894 2.5e-06 57.0 43 58.1
VMungo0647G1963 Vigna mungo HOM05D003148 ORTHO05D003894 2.5e-06 57.0 74 44.6
Lj8A168T100 Lonicera japonica HOM05D003148 ORTHO05D003894 3.2e-06 56.6 40 60.0
PGR083G0390 Punica granatum HOM05D003148 ORTHO05D003894 4.2e-06 56.2 43 51.2
Hund24589 Selenicereus undatus HOM05D003148 ORTHO05D003894 4.2e-06 56.2 61 45.9
CiPaw.12G128200 Carya illinoinensis HOM05D003148 ORTHO05D003894 5.5e-06 55.8 63 42.9
RcHm_v2.0_Chr5g0038301 Rosa chinensis HOM05D003148 ORTHO05D003894 5.5e-06 55.8 109 33.9
Ciclev10008272m.g Citrus clementina HOM05D003148 ORTHO05D003894 7.2e-06 55.5 88 37.5
Cc05_g13530 Coffea canephora HOM05D003148 ORTHO05D003894 7.2e-06 55.5 46 52.2
Glyma.02G289700 Glycine max HOM05D003148 ORTHO05D003894 7.2e-06 55.5 46 56.5
Solyc07g064330.3 Solanum lycopersicum HOM05D003148 ORTHO05D003894 7.2e-06 55.5 128 32.8
Aa31LG8G7340 Aethionema arabicum HOM05D003148 ORTHO05D003894 9.4e-06 55.1 80 42.5
CAN.G337.107 Capsicum annuum HOM05D003148 ORTHO05D003894 9.4e-06 55.1 45 55.6
CARHR040890 Cardamine hirsuta HOM05D003148 ORTHO05D003894 9.4e-06 55.1 58 39.7
HanXRQChr05g0159091 Helianthus annuus HOM05D003148 ORTHO05D003894 9.4e-06 55.1 58 48.3


User provided reference genes

Program Settings