Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI29645 Sapria himalayana HOM05D001849 ORTHO05D000062 6.7e-122 440.7 215 100.0
SHI03527 Sapria himalayana HOM05D000616 ORTHO05D000233 1.1e-15 87.8 40 90.0
SHI00877 Sapria himalayana HOM05D000616 ORTHO05D000062 6.0e-14 82.0 40 90.0
SHI37902 Sapria himalayana HOM05D000107 ORTHO05D000062 6.0e-14 82.0 40 85.0
SHI19439 Sapria himalayana HOM05D000107 ORTHO05D000062 1.3e-13 80.9 40 85.0
SHI14215 Sapria himalayana HOM05D000616 ORTHO05D000233 2.3e-13 80.1 40 85.0
SHI19642 Sapria himalayana HOM05D000616 ORTHO05D000233 3.0e-13 79.7 40 85.0
SHI36546 Sapria himalayana HOM05D000107 ORTHO05D000233 3.9e-13 79.3 40 87.5
SHI02663 Sapria himalayana HOM05D000616 ORTHO05D000233 6.7e-13 78.6 40 85.0
SHI21801 Sapria himalayana HOM05D000616 ORTHO05D000233 6.7e-13 78.6 40 82.5
SHI22033 Sapria himalayana HOM05D000616 ORTHO05D000062 6.7e-13 78.6 40 82.5
SHI32821 Sapria himalayana HOM05D000616 ORTHO05D000233 6.7e-13 78.6 40 85.0
SHI06252 Sapria himalayana HOM05D000107 ORTHO05D000062 8.7e-13 78.2 40 82.5
SHI09960 Sapria himalayana HOM05D000107 ORTHO05D000062 8.7e-13 78.2 39 84.6
SHI22977 Sapria himalayana HOM05D000107 ORTHO05D000062 1.1e-12 77.8 40 87.5
SHI23081 Sapria himalayana HOM05D000616 ORTHO05D000233 1.1e-12 77.8 39 84.6
SHI38185 Sapria himalayana HOM05D000107 ORTHO05D000062 1.1e-12 77.8 40 85.0
SHI23128 Sapria himalayana HOM05D000616 ORTHO05D000233 1.5e-12 77.4 40 82.5
SHI14858 Sapria himalayana HOM05D000616 ORTHO05D000233 3.3e-12 76.3 40 82.5
SHI22000 Sapria himalayana HOM05D000107 ORTHO05D000062 3.3e-12 76.3 40 80.0
SHI25111 Sapria himalayana HOM05D000616 ORTHO05D000233 3.3e-12 76.3 39 82.1
SHI38314 Sapria himalayana HOM05D000616 ORTHO05D000233 3.3e-12 76.3 40 82.5
SHI03410 Sapria himalayana HOM05D000107 ORTHO05D000062 4.3e-12 75.9 40 82.5
SHI15542 Sapria himalayana HOM05D000107 ORTHO05D000062 5.6e-12 75.5 40 80.0
SHI34576 Sapria himalayana HOM05D000616 ORTHO05D000062 5.6e-12 75.5 40 82.5
SHI39811 Sapria himalayana HOM05D000616 ORTHO05D000062 5.6e-12 75.5 40 85.0
SHI34868 Sapria himalayana HOM05D000616 ORTHO05D000062 7.4e-12 75.1 39 84.6
Manes.04G148200 Manihot esculenta HOM05D001849 ORTHO05D004075 9.6e-12 74.7 92 50.0
SHI20069 Sapria himalayana HOM05D000616 ORTHO05D000233 9.6e-12 74.7 40 82.5
SHI24076 Sapria himalayana HOM05D000107 ORTHO05D000062 9.6e-12 74.7 40 82.5
SHI24087 Sapria himalayana HOM05D000616 ORTHO05D000233 9.6e-12 74.7 40 80.0
SHI35915 Sapria himalayana HOM05D000107 ORTHO05D000062 9.6e-12 74.7 40 80.0
SHI26970 Sapria himalayana HOM05D000107 ORTHO05D000062 1.3e-11 74.3 39 82.1
SHI27903 Sapria himalayana HOM05D000616 ORTHO05D000233 1.3e-11 74.3 40 77.5
SHI36328 Sapria himalayana HOM05D000107 ORTHO05D000062 1.6e-11 73.9 40 82.5
SHI37659 Sapria himalayana HOM05D000107 ORTHO05D000062 2.8e-11 73.2 40 77.5
SHI41870 Sapria himalayana HOM05D000616 ORTHO05D000233 2.8e-11 73.2 40 77.5
SHI46187 Sapria himalayana HOM05D000616 ORTHO05D000233 2.8e-11 73.2 40 77.5
SHI08770 Sapria himalayana HOM05D000616 ORTHO05D000233 6.2e-11 72.0 40 77.5
SHI01311 Sapria himalayana HOM05D000616 ORTHO05D000233 8.1e-11 71.6 42 76.2
SHI38595 Sapria himalayana HOM05D000107 ORTHO05D000062 8.1e-11 71.6 40 77.5
SHI38731 Sapria himalayana HOM05D000107 ORTHO05D000062 8.1e-11 71.6 40 77.5
SHI33672 Sapria himalayana HOM05D000616 ORTHO05D000233 1.1e-10 71.2 40 77.5
SHI35924 Sapria himalayana HOM05D000107 ORTHO05D000062 1.1e-10 71.2 40 75.0
RhsimUnG0218400 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.8e-10 70.5 53 58.5
SHI29380 Sapria himalayana HOM05D000107 ORTHO05D000062 2.4e-10 70.1 40 75.0
SHI34152 Sapria himalayana HOM05D000616 ORTHO05D000233 2.4e-10 70.1 40 75.0
SHI28668 Sapria himalayana HOM05D000107 ORTHO05D000062 3.1e-10 69.7 40 80.0
SHI42017 Sapria himalayana HOM05D000616 ORTHO05D000233 3.1e-10 69.7 40 75.0
SHI46859 Sapria himalayana HOM05D000107 ORTHO05D000062 3.1e-10 69.7 40 75.0
Potri.001G165800 Populus trichocarpa HOM05D001849 ORTHO05D004075 4.0e-10 69.3 97 43.3
SHI16613 Sapria himalayana HOM05D000616 ORTHO05D000233 5.3e-10 68.9 39 76.9
Atru.chr1.1855 Acer truncatum HOM05D000107 ORTHO05D000062 6.9e-10 68.6 53 54.7
SHI04229 Sapria himalayana HOM05D009124 ORTHO05D000062 6.9e-10 68.6 35 85.7
SHI33803 Sapria himalayana HOM05D000107 ORTHO05D000062 6.9e-10 68.6 40 75.0
Rhsim09G0096400 Rhododendron simsii HOM05D000107 ORTHO05D000062 9.0e-10 68.2 53 56.6
SHI03580 Sapria himalayana HOM05D000616 ORTHO05D000233 9.0e-10 68.2 39 74.4
SHI16200 Sapria himalayana HOM05D000616 ORTHO05D000062 9.0e-10 68.2 40 75.0
SHI36208 Sapria himalayana HOM05D000616 ORTHO05D000233 1.5e-09 67.4 36 83.3
SHI39167 Sapria himalayana HOM05D000616 ORTHO05D000233 2.0e-09 67.0 40 75.0
CANSAT21G2308 Cannabis sativa HOM05D000107 ORTHO05D000062 3.4e-09 66.2 53 54.7
Sabra01G0127500 Salix brachista HOM05D001849 ORTHO05D004075 3.4e-09 66.2 97 43.3
Rhsim07G0107900 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.5e-09 65.9 53 54.7
Rhsim10G0157200 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.5e-09 65.9 53 54.7
RhsimUnG0032800 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.5e-09 65.9 53 54.7
RcHm_v2.0_Chr4g0417061 Rosa chinensis HOM05D000107 ORTHO05D000062 4.5e-09 65.9 53 56.6
Sabra03G0040600 Salix brachista HOM05D001849 ORTHO05D004075 4.5e-09 65.9 97 40.2
SHI39880 Sapria himalayana HOM05D000616 ORTHO05D000233 5.8e-09 65.5 37 75.7
VMungo0331G0141 Vigna mungo HOM05D000107 ORTHO05D000062 5.8e-09 65.5 87 41.4
SHI33835 Sapria himalayana HOM05D000616 ORTHO05D000233 7.6e-09 65.1 40 72.5
SHI36555 Sapria himalayana HOM05D000107 ORTHO05D000062 7.6e-09 65.1 34 85.3
CANSAT54G0015 Cannabis sativa HOM05D000107 ORTHO05D000062 9.9e-09 64.7 53 52.8
CANSAT01G1821 Cannabis sativa HOM05D000107 ORTHO05D000062 1.3e-08 64.3 40 62.5
CANSAT21G1204 Cannabis sativa HOM05D000107 ORTHO05D000062 1.3e-08 64.3 87 40.2
CANSAT35G0130 Cannabis sativa HOM05D000107 ORTHO05D000062 1.3e-08 64.3 40 62.5
SHI26373 Sapria himalayana HOM05D000616 ORTHO05D000233 1.3e-08 64.3 29 89.7
CANSAT54G2061 Cannabis sativa HOM05D000107 ORTHO05D000062 1.7e-08 63.9 53 50.9
Haze_16065 Corylus avellana HOM05D001849 ORTHO05D004075 2.2e-08 63.5 93 44.1
TWI73G0549 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 2.2e-08 63.5 53 54.7
ClCG07G007560 Citrullus lanatus HOM05D000107 ORTHO05D000062 3.8e-08 62.8 40 65.0
COL.COLO4_30798 Corchorus olitorius HOM05D001849 ORTHO05D004075 3.8e-08 62.8 92 39.1
PSO675G7458 Papaver somniferum HOM05D000107 ORTHO05D000062 3.8e-08 62.8 74 44.6
RhsimUnG0147700 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.8e-08 62.8 53 52.8
CANSAT01G2955 Cannabis sativa HOM05D000107 ORTHO05D000062 6.4e-08 62.0 40 60.0
ECA246G5051 Erigeron canadensis HOM05D000107 ORTHO05D000062 6.4e-08 62.0 53 52.8
Rhsim01G0019000 Rhododendron simsii HOM05D000107 ORTHO05D000062 6.4e-08 62.0 51 54.9
Atru.chr6.157 Acer truncatum HOM05D000107 ORTHO05D000062 8.4e-08 61.6 87 40.2
PSO566G0169 Papaver somniferum HOM05D000107 ORTHO05D000062 8.4e-08 61.6 42 59.5
Cfa003510 Carpinus fangiana HOM05D001849 ORTHO05D004075 1.1e-07 61.2 93 45.2
PSO173G0183 Papaver somniferum HOM05D000107 ORTHO05D000062 1.1e-07 61.2 87 40.2
Cpa.g.sc25.149 Carica papaya HOM05D020865 ORTHO05D004075 1.4e-07 60.8 90 42.2
Duzib235G1365 Durio zibethinus HOM05D001849 ORTHO05D004075 1.4e-07 60.8 92 41.3
PSO566G0068 Papaver somniferum HOM05D000107 ORTHO05D000062 1.4e-07 60.8 58 50.0
RcHm_v2.0_Chr1g0321901 Rosa chinensis HOM05D000107 ORTHO05D000062 1.4e-07 60.8 74 41.9
RcHm_v2.0_Chr3g0483851 Rosa chinensis HOM05D000107 ORTHO05D000062 1.4e-07 60.8 74 41.9
SHI32563 Sapria himalayana HOM05D000616 ORTHO05D000233 1.4e-07 60.8 40 72.5
Duzib192G0748 Durio zibethinus HOM05D001849 ORTHO05D004075 1.9e-07 60.5 99 38.4
RcHm_v2.0_Chr5g0067601 Rosa chinensis HOM05D000107 ORTHO05D000062 1.9e-07 60.5 87 37.9
FvH4_4g09822 Fragaria vesca HOM05D000107 ORTHO05D000062 2.4e-07 60.1 68 42.6
Ca_02256_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 4.2e-07 59.3 51 51.0
Ca_03880_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 4.2e-07 59.3 37 62.2
Ca_12218_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 4.2e-07 59.3 51 51.0
Ca_14973_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 4.2e-07 59.3 51 51.0
Ca_27182_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 4.2e-07 59.3 51 51.0
Ca_27440_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 4.2e-07 59.3 51 51.0
Ca_27711_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 4.2e-07 59.3 51 51.0
PSO017G0673 Papaver somniferum HOM05D000107 ORTHO05D000062 4.2e-07 59.3 87 39.1
Atru.chr1.4088 Acer truncatum HOM05D001849 ORTHO05D004075 5.5e-07 58.9 91 44.0
FvH4_6g31292 Fragaria vesca HOM05D000107 ORTHO05D000062 5.5e-07 58.9 53 50.9
HanXRQChr14g0441971 Helianthus annuus HOM05D000107 ORTHO05D000062 5.5e-07 58.9 84 41.7
TWI60G0582 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 5.5e-07 58.9 53 50.9
PSO339G6471 Papaver somniferum HOM05D000107 ORTHO05D000062 7.1e-07 58.5 56 51.8
RcHm_v2.0_Chr2g0146441 Rosa chinensis HOM05D001849 ORTHO05D004075 7.1e-07 58.5 91 40.7
Sc15g0000590 Simmondsia chinensis HOM05D001849 ORTHO05D004075 9.3e-07 58.2 93 40.9
Aqoxy3G01838 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 1.2e-06 57.8 39 59.0
Gohir.A05G138700 Gossypium hirsutum HOM05D001849 ORTHO05D004075 1.2e-06 57.8 94 41.5
CANSAT54G0700 Cannabis sativa HOM05D000107 ORTHO05D000062 1.6e-06 57.4 53 47.2
TWI14G1157 Tripterygium wilfordii HOM05D001849 ORTHO05D004075 1.6e-06 57.4 92 43.5
Actinidia32207 Actinidia chinensis HOM05D001849 ORTHO05D004075 2.7e-06 56.6 91 42.9
Thecc.06G125000 Theobroma cacao HOM05D001849 ORTHO05D004075 2.7e-06 56.6 92 38.0
Manes.11G016300 Manihot esculenta HOM05D001849 ORTHO05D004075 3.5e-06 56.2 100 38.0
QL05p003642 Quercus lobata HOM05D001849 ORTHO05D004075 3.5e-06 56.2 98 43.9
FvH4_1g29805 Fragaria vesca HOM05D000107 ORTHO05D000062 4.6e-06 55.8 53 47.2
PSO079G0038 Papaver somniferum HOM05D000107 ORTHO05D000062 4.6e-06 55.8 54 48.1
Hund18671 Selenicereus undatus HOM05D001849 ORTHO05D004075 4.6e-06 55.8 90 36.7
TWI59G0043 Tripterygium wilfordii HOM05D001849 ORTHO05D004075 4.6e-06 55.8 95 43.2
Aqoxy7G04079 Aquilegia oxysepala HOM05D001849 ORTHO05D004075 6.0e-06 55.5 106 41.5
FvH4_3g31714 Fragaria vesca HOM05D000107 ORTHO05D000062 6.0e-06 55.5 53 50.9
Lalb_Chr04g0253751 Lupinus albus HOM05D001849 ORTHO05D004075 6.0e-06 55.5 90 37.8
Rhsim11G0005200 Rhododendron simsii HOM05D000107 ORTHO05D000062 6.0e-06 55.5 50 46.0
SHI08416 Sapria himalayana HOM05D000049 ORTHO05D000233 6.0e-06 55.5 27 92.6
TWI32G1228 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 6.0e-06 55.5 40 55.0
Gohir.D06G149500 Gossypium hirsutum HOM05D001849 ORTHO05D004075 7.9e-06 55.1 92 37.0
MBI19_g29883_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004075 7.9e-06 55.1 97 38.1
Rhsim11G0004800 Rhododendron simsii HOM05D000107 ORTHO05D000062 7.9e-06 55.1 53 45.3
RcHm_v2.0_Chr5g0007671 Rosa chinensis HOM05D000107 ORTHO05D000062 7.9e-06 55.1 49 51.0
TPR.G21804 Trifolium pratense HOM05D000107 ORTHO05D000062 7.9e-06 55.1 53 45.3
TPR.G25383 Trifolium pratense HOM05D000107 ORTHO05D000062 7.9e-06 55.1 53 45.3


User provided reference genes

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