Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI27002 Sapria himalayana HOM05D000113 ORTHO05D012125 3.2e-81 305.1 158 100.0
AUR62029968 Chenopodium quinoa HOM05D000113 ORTHO05D012125 2.6e-14 82.8 143 40.6
Haze_07691 Corylus avellana HOM05D000113 ORTHO05D002571 9.8e-14 80.9 150 41.3
Cfa019308 Carpinus fangiana HOM05D000113 ORTHO05D002571 2.4e-12 76.3 150 39.3
Duzib205G1857 Durio zibethinus HOM05D000113 ORTHO05D002571 1.0e-10 70.9 145 40.0
Manes.13G073000 Manihot esculenta HOM05D000113 ORTHO05D002571 3.9e-10 68.9 166 35.5
TAR374G0746 Trochodendron aralioides HOM05D000113 ORTHO05D002571 6.6e-10 68.2 141 36.9
Dinv38794 Davidia involucrata HOM05D000113 ORTHO05D002571 8.6e-10 67.8 136 38.2
PSO063G4203 Papaver somniferum HOM05D000113 ORTHO05D002571 8.6e-10 67.8 142 33.8
Gohir.D12G183900 Gossypium hirsutum HOM05D000113 ORTHO05D002571 2.5e-09 66.2 145 37.9
Gorai.008G197200 Gossypium raimondii HOM05D000113 ORTHO05D002571 4.3e-09 65.5 141 38.3
PSO013G0399 Papaver somniferum HOM05D000113 ORTHO05D012125 5.6e-09 65.1 142 34.5
Gohir.A12G181200 Gossypium hirsutum HOM05D000113 ORTHO05D002571 7.3e-09 64.7 141 39.0
Phvul.009G193400 Phaseolus vulgaris HOM05D000113 ORTHO05D002571 7.3e-09 64.7 102 43.1
PSO409G0035 Papaver somniferum HOM05D000113 ORTHO05D002571 1.2e-08 63.9 142 35.2
GSVIVG01007911001 Vitis vinifera HOM05D000113 ORTHO05D002571 1.6e-08 63.5 108 42.6
PGR044G1093 Punica granatum HOM05D000113 ORTHO05D002571 4.7e-08 62.0 130 36.9
TWI73G0006 Tripterygium wilfordii HOM05D000113 ORTHO05D002571 4.7e-08 62.0 161 33.5
EL10Ac3g06248 Beta vulgaris HOM05D000113 ORTHO05D002571 1.1e-07 60.8 100 42.0
Eucgr.K02504 Eucalyptus grandis HOM05D000113 ORTHO05D012125 1.1e-07 60.8 168 33.9
PGSC0003DMG401024649 Solanum tuberosum HOM05D000113 ORTHO05D012125 1.1e-07 60.8 148 35.1
CiPaw.11G050600 Carya illinoinensis HOM05D000113 ORTHO05D002571 3.1e-07 59.3 102 42.2
CAN.G479.26 Capsicum annuum HOM05D000113 ORTHO05D012125 4.0e-07 58.9 146 34.9
Glyma.06G201700 Glycine max HOM05D000113 ORTHO05D002571 4.0e-07 58.9 102 39.2
Psat0s3790g0040 Pisum sativum HOM05D000113 ORTHO05D002571 4.0e-07 58.9 103 39.8
Solyc03g115400.2 Solanum lycopersicum HOM05D000113 ORTHO05D012125 4.0e-07 58.9 147 34.0
Prupe.5G201700 Prunus persica HOM05D000113 ORTHO05D002571 5.2e-07 58.5 100 41.0
Sc10g0009750 Simmondsia chinensis HOM05D000113 ORTHO05D002571 5.2e-07 58.5 126 34.9
Ah.13g073050 Amaranthus hybridus HOM05D000113 ORTHO05D002571 6.8e-07 58.2 104 38.5
Ca_13800_v3 Cicer arietinum L. HOM05D000113 ORTHO05D002571 6.8e-07 58.2 103 38.8
Nn2g13470 Nelumbo nucifera HOM05D000113 ORTHO05D002571 8.9e-07 57.8 103 41.7
SGA_v2.0_scaffold1221G53867 Striga asiatica HOM05D000113 ORTHO05D012125 8.9e-07 57.8 142 33.1
Hma1.2p1_0060F.1_g033270 Hydrangea macrophylla HOM05D000113 ORTHO05D002571 1.5e-06 57.0 102 38.2
TPR.G12156 Trifolium pratense HOM05D000113 ORTHO05D002571 1.5e-06 57.0 103 38.8
Glyma.01G040900 Glycine max HOM05D000113 ORTHO05D002571 2.0e-06 56.6 137 35.0
Actinidia35027 Actinidia chinensis HOM05D000113 ORTHO05D002571 2.6e-06 56.2 114 36.0
Lj6g0016007 Lotus japonicus HOM05D000113 ORTHO05D002571 2.6e-06 56.2 102 38.2
Aa31LG7G3740 Aethionema arabicum HOM05D000113 ORTHO05D002571 3.4e-06 55.8 145 33.1
Lalb_Chr13g0294241 Lupinus albus HOM05D000113 ORTHO05D002571 3.4e-06 55.8 150 32.7
Sopen03g034400 Solanum pennellii HOM05D000113 ORTHO05D002571 3.4e-06 55.8 154 34.4
Medtr1g010030 Medicago truncatula HOM05D000113 ORTHO05D002571 4.4e-06 55.5 150 34.0
PGSC0003DMG402024649 Solanum tuberosum HOM05D000113 ORTHO05D002571 4.4e-06 55.5 144 34.0
Thecc.03G097900 Theobroma cacao HOM05D000113 ORTHO05D002571 4.4e-06 55.5 102 41.2
Prupe.6G014300 Prunus persica HOM05D000113 ORTHO05D012125 5.8e-06 55.1 108 37.0
arahy.Tifrunner.gnm1.ann1.LUB4JJ Arachis hypogaea HOM05D000113 ORTHO05D002571 7.6e-06 54.7 102 38.2
MD06G1200100 Malus domestica HOM05D000113 ORTHO05D002571 7.6e-06 54.7 100 38.0
Sabra15G0006800 Salix brachista HOM05D000113 ORTHO05D002571 7.6e-06 54.7 133 34.6
MD08G1042900 Malus domestica HOM05D000113 ORTHO05D002571 9.9e-06 54.3 136 32.4


User provided reference genes

Program Settings