Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI25295 Sapria himalayana HOM05D004148 ORTHO05D004709 1.2e-202 709.5 346 100.0
Potri.009G153300 Populus trichocarpa HOM05D004148 ORTHO05D004709 1.3e-47 194.5 173 52.0
Manes.04G054800 Manihot esculenta HOM05D004148 ORTHO05D004709 6.6e-47 192.2 174 54.6
Prupe.6G151400 Prunus persica HOM05D004148 ORTHO05D004709 4.3e-46 189.5 179 52.5
Gohir.D05G079200 Gossypium hirsutum HOM05D004148 ORTHO05D004709 7.3e-46 188.7 174 52.9
Gorai.009G080700 Gossypium raimondii HOM05D004148 ORTHO05D004709 9.6e-46 188.3 174 52.9
GSVIVG01022379001 Vitis vinifera HOM05D004148 ORTHO05D004709 1.6e-45 187.6 199 46.7
Atru.chr3.3014 Acer truncatum HOM05D004148 ORTHO05D004709 2.1e-45 187.2 188 48.9
Gohir.A05G076400 Gossypium hirsutum HOM05D004148 ORTHO05D004709 4.8e-45 186.0 174 52.3
MD03G1162400 Malus domestica HOM05D004148 ORTHO05D004709 6.2e-45 185.7 179 51.4
Duzib168G1551 Durio zibethinus HOM05D004148 ORTHO05D004709 8.1e-45 185.3 175 52.0
MD11G1178600 Malus domestica HOM05D004148 ORTHO05D004709 1.1e-44 184.9 179 50.8
Haze_23628 Corylus avellana HOM05D004148 ORTHO05D004709 2.4e-44 183.7 175 52.0
Cfa010235 Carpinus fangiana HOM05D004148 ORTHO05D004709 5.3e-44 182.6 175 51.4
Thecc.09G266000 Theobroma cacao HOM05D004148 ORTHO05D004709 6.9e-44 182.2 179 50.8
RcHm_v2.0_Chr5g0049541 Rosa chinensis HOM05D004148 ORTHO05D004709 1.2e-43 181.4 190 49.5
QL01p018674 Quercus lobata HOM05D004148 ORTHO05D004709 2.6e-43 180.3 199 47.7
FAN22G0787 Fragaria x ananassa HOM05D004148 ORTHO05D004709 1.7e-42 177.6 196 46.9
FAN17G2621 Fragaria x ananassa HOM05D004148 ORTHO05D004709 6.4e-42 175.6 196 46.4
FvH4_4g33990 Fragaria vesca HOM05D004148 ORTHO05D004709 8.4e-42 175.3 187 47.6
TWI60G0836 Tripterygium wilfordii HOM05D004148 ORTHO05D004709 2.4e-41 173.7 179 49.2
Ciclev10027694m.g Citrus clementina HOM05D004148 ORTHO05D004709 7.1e-41 172.2 180 49.4
FAN12G2472 Fragaria x ananassa HOM05D004148 ORTHO05D004709 7.1e-41 172.2 187 46.5
Sed0012220 Sechium edule HOM05D004148 ORTHO05D004709 1.6e-40 171.0 177 44.1
CSS0039701 Camellia sinensis var. sinensis HOM05D004148 ORTHO05D004709 2.7e-40 170.2 179 47.5
CSS0039756 Camellia sinensis var. sinensis HOM05D004148 ORTHO05D004709 2.7e-40 170.2 179 47.5
ClCG05G010880 Citrullus lanatus HOM05D004148 ORTHO05D004709 2.7e-40 170.2 174 46.6
CsaV3_3G017640 Cucumis sativus L. HOM05D004148 ORTHO05D004709 8.7e-39 165.2 177 45.2
FvH4_3g27031 Fragaria vesca HOM05D004148 ORTHO05D004709 1.5e-38 164.5 183 45.9
Cpa.g.sc103.97 Carica papaya HOM05D004148 ORTHO05D004709 3.3e-38 163.3 173 49.1
PGR102G2778 Punica granatum HOM05D004148 ORTHO05D004709 4.3e-38 162.9 173 50.3
MELO3C020298.2 Cucumis melo HOM05D004148 ORTHO05D004709 5.6e-38 162.5 177 44.1
Hma1.2p1_2711F.1_g327330 Hydrangea macrophylla HOM05D004148 ORTHO05D004709 9.6e-38 161.8 173 47.4
Eucgr.B03795 Eucalyptus grandis HOM05D004148 ORTHO05D004709 1.6e-37 161.0 174 47.7
Lj2A891G11 Lonicera japonica HOM05D004148 ORTHO05D004709 1.6e-37 161.0 180 47.8
Lalb_Chr16g0376251 Lupinus albus HOM05D004148 ORTHO05D004709 2.8e-37 160.2 176 49.4
Hund18819 Selenicereus undatus HOM05D004148 ORTHO05D004709 4.8e-37 159.5 175 46.9
Ca_24340_v3 Cicer arietinum L. HOM05D004148 ORTHO05D004709 6.2e-37 159.1 179 49.2
Lj1g0011831 Lotus japonicus HOM05D004148 ORTHO05D004709 6.2e-37 159.1 181 48.1
Glyma.01G244400 Glycine max HOM05D004148 ORTHO05D004709 8.1e-37 158.7 180 47.8
arahy.Tifrunner.gnm1.ann1.SF9HJV Arachis hypogaea HOM05D004148 ORTHO05D004709 3.1e-36 156.8 183 47.0
Medtr5g004880 Medicago truncatula HOM05D004148 ORTHO05D004709 3.1e-36 156.8 175 47.4
VMungo1215G0285 Vigna mungo HOM05D004148 ORTHO05D004709 4.0e-36 156.4 178 47.8
EL10Ac7g16248 Beta vulgaris HOM05D004148 ORTHO05D004709 1.2e-35 154.8 175 44.0
arahy.Tifrunner.gnm1.ann1.J94639 Arachis hypogaea HOM05D004148 ORTHO05D004709 1.5e-35 154.5 182 45.6
Dinv32838 Davidia involucrata HOM05D004148 ORTHO05D004709 1.5e-35 154.5 176 46.6
Actinidia12896 Actinidia chinensis HOM05D001400 ORTHO05D001795 2.0e-35 154.1 183 46.4
Peaxi162Scf00217g00627 Petunia axillaris HOM05D004148 ORTHO05D004709 3.4e-35 153.3 179 46.9
Psat4g228400 Pisum sativum HOM05D004148 ORTHO05D004709 4.5e-35 152.9 179 46.4
Nn2g14486 Nelumbo nucifera HOM05D004148 ORTHO05D004709 9.9e-35 151.8 177 42.4
Phvul.002G053700 Phaseolus vulgaris HOM05D004148 ORTHO05D004709 2.9e-34 150.2 176 45.5
Sc06g0008560 Simmondsia chinensis HOM05D004148 ORTHO05D004709 2.9e-34 150.2 175 43.4
Oeu048810.1 Olea europaea HOM05D004148 ORTHO05D004709 6.4e-34 149.1 201 40.3
MSTRG.21311 Avicennia marina HOM05D004148 ORTHO05D004709 1.4e-33 147.9 180 44.4
AUR62020189 Chenopodium quinoa HOM05D004148 ORTHO05D004709 1.4e-33 147.9 175 41.7
Aqoxy1G00551 Aquilegia oxysepala HOM05D004148 ORTHO05D004709 2.5e-33 147.1 189 42.9
Sopen11g029250 Solanum pennellii HOM05D004148 ORTHO05D004709 3.2e-33 146.7 179 46.4
PSO339G2294 Papaver somniferum HOM05D004148 ORTHO05D004709 7.1e-33 145.6 179 43.6
Solyc11g071570.3 Solanum lycopersicum HOM05D004148 ORTHO05D004709 7.1e-33 145.6 179 45.3
Lsat_1_v5_gn_5_75780 Lactuca sativa HOM05D004148 ORTHO05D004709 9.3e-33 145.2 175 45.1
Ah.15g099170 Amaranthus hybridus HOM05D004148 ORTHO05D004709 2.1e-32 144.1 177 42.4
Nitab4.5_0000615g0090 Nicotiana tabacum HOM05D004148 ORTHO05D004709 3.5e-32 143.3 179 44.7
PSO384G5014 Papaver somniferum HOM05D004148 ORTHO05D004709 3.5e-32 143.3 179 43.0
CAN.G439.18 Capsicum annuum HOM05D004148 ORTHO05D004709 4.6e-32 142.9 179 44.1
Nitab4.5_0005222g0040 Nicotiana tabacum HOM05D004148 ORTHO05D004709 1.3e-31 141.4 180 45.0
Rhsim13G0199700 Rhododendron simsii HOM05D004148 ORTHO05D004709 1.8e-31 141.0 179 39.7
ECA233G2337 Erigeron canadensis HOM05D004148 ORTHO05D004709 2.3e-31 140.6 179 41.9
CANSAT54G2785 Cannabis sativa HOM05D004148 ORTHO05D004709 3.9e-31 139.8 179 43.6
Migut.D00721 Erythranthe guttata HOM05D004148 ORTHO05D004709 1.1e-30 138.3 201 39.3
THA.LOC104815063 Tarenaya hassleriana HOM05D004148 ORTHO05D004709 1.9e-30 137.5 174 42.5
TAR623G1397 Trochodendron aralioides HOM05D004148 ORTHO05D004709 1.9e-30 137.5 179 42.5
HanXRQChr03g0089821 Helianthus annuus HOM05D004148 ORTHO05D004709 2.5e-30 137.1 176 40.3
Hma1.2p1_0218F.1_g092390 Hydrangea macrophylla HOM05D004148 ORTHO05D004709 4.8e-29 132.9 150 45.3
Cc00_g06190 Coffea canephora HOM05D004148 ORTHO05D004709 2.4e-28 130.6 187 38.5
CARHR108980 Cardamine hirsuta HOM05D004148 ORTHO05D004709 5.3e-28 129.4 181 39.2
BcaB01g00875 Brassica carinata HOM05D004148 ORTHO05D004709 9.0e-28 128.6 181 40.3
Carub.0005s0948 Capsella rubella HOM05D004148 ORTHO05D004709 9.0e-28 128.6 172 40.1
Sp5g17550 Schrenkiella parvula HOM05D004148 ORTHO05D004709 1.5e-27 127.9 181 40.3
SGA_v2.0_scaffold29G12109 Striga asiatica HOM05D004148 ORTHO05D004709 4.5e-27 126.3 187 40.1
A06p26680 Brassica napus HOM05D004148 ORTHO05D004709 7.6e-27 125.6 181 39.2
BcaB02g10777 Brassica carinata HOM05D004148 ORTHO05D004709 3.8e-26 123.2 181 39.2
BraA06t25067Z Brassica rapa HOM05D004148 ORTHO05D004709 3.8e-26 123.2 183 39.9
Thhalv10002374m.g Eutrema salsugineum HOM05D004148 ORTHO05D004709 3.8e-26 123.2 181 37.6
BcaC01g02217 Brassica carinata HOM05D004148 ORTHO05D004709 4.9e-26 122.9 181 38.7
A06p19850 Brassica napus HOM05D004148 ORTHO05D004709 1.9e-25 120.9 183 39.9
BolSC21t60233H Brassica oleracea HOM05D004148 ORTHO05D004709 1.9e-25 120.9 181 38.1
AT3G43610 Arabidopsis thaliana HOM05D004148 ORTHO05D004709 5.5e-25 119.4 182 37.4
CDE07G1769 Ceratophyllum demersum HOM05D004148 ORTHO05D004709 7.1e-25 119.0 172 43.0
Aa31LG4G13420 Aethionema arabicum HOM05D004148 ORTHO05D004709 9.3e-25 118.6 167 41.3
BcaC01g01775 Brassica carinata HOM05D004148 ORTHO05D004709 9.3e-25 118.6 183 38.8
BolC3t19498H Brassica oleracea HOM05D004148 ORTHO05D004709 9.3e-25 118.6 183 38.8
C03p72000 Brassica napus HOM05D004148 ORTHO05D004709 1.2e-24 118.2 183 38.8
AL5G21540 Arabidopsis lyrata HOM05D004148 ORTHO05D004709 1.6e-24 117.9 171 41.5
SEGI_18042 Sequoiadendron giganteum HOM05D004148 ORTHO05D004709 1.0e-23 115.2 237 32.9
FAN16G3212 Fragaria x ananassa HOM05D004148 ORTHO05D004709 3.3e-22 110.2 133 42.9
DCAR_012264 Daucus carota HOM05D000495 ORTHO05D000357 9.7e-22 108.6 123 43.9
SalBow6G3333 Salvia bowleyana HOM05D004148 ORTHO05D004709 9.7e-22 108.6 189 35.4
ATR0697G020 Amborella trichopoda HOM05D004148 ORTHO05D004709 2.8e-21 107.1 185 37.8
Zm00001eb073760 Zea mays HOM05D004148 ORTHO05D004709 8.2e-21 105.5 190 33.2
unitig_21.g20312 Utricularia gibba HOM05D004148 ORTHO05D004709 1.1e-17 95.1 180 35.0
Mapoly0099s0003 Marchantia polymorpha HOM05D004148 ORTHO05D004709 2.1e-16 90.9 182 36.3
HPP92_019532 Vanilla planifolia HOM05D004148 ORTHO05D004709 2.1e-16 90.9 178 33.1
vmacro04062 Vaccinium macrocarpon HOM05D004148 ORTHO05D004709 1.1e-14 85.1 101 42.6
Pp3c11_24620 Physcomitrium patens HOM05D004148 ORTHO05D004709 1.5e-14 84.7 102 45.1
BraA06t25600Z Brassica rapa HOM05D004148 ORTHO05D004709 3.3e-14 83.6 93 47.3
Psat6g175800 Pisum sativum HOM05D004148 ORTHO05D004709 9.7e-14 82.0 102 42.2
AagrBONN_evm.TU.Sc2ySwM_228.375 Anthoceros agrestis HOM05D004148 ORTHO05D004709 1.8e-12 77.8 103 41.7
CBR_g23077 Chara braunii HOM05D004148 ORTHO05D004709 4.1e-12 76.6 106 38.7
MBI11_g07705_MAGBIO Magnolia biondii HOM05D004148 ORTHO05D004709 4.1e-12 76.6 64 54.7
Psat6g091080 Pisum sativum HOM05D004333 ORTHO05D005363 2.0e-06 57.8 76 40.8


User provided reference genes

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