Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI25292 Sapria himalayana HOM05D004148 ORTHO05D004709 3.1e-84 315.1 156 100.0
Prupe.6G151400 Prunus persica HOM05D004148 ORTHO05D004709 4.3e-30 135.2 112 59.8
MD03G1162300 Malus domestica HOM05D004148 ORTHO05D004709 1.7e-29 133.3 113 58.4
Potri.009G153300 Populus trichocarpa HOM05D004148 ORTHO05D004709 3.7e-29 132.1 112 60.7
Cfa010235 Carpinus fangiana HOM05D004148 ORTHO05D004709 4.8e-29 131.7 112 58.9
Manes.04G054800 Manihot esculenta HOM05D004148 ORTHO05D004709 1.1e-28 130.6 139 49.6
MD11G1178600 Malus domestica HOM05D004148 ORTHO05D004709 1.2e-27 127.1 112 57.1
FAN12G2472 Fragaria x ananassa HOM05D004148 ORTHO05D004709 3.4e-27 125.6 113 55.8
RcHm_v2.0_Chr5g0049541 Rosa chinensis HOM05D004148 ORTHO05D004709 3.4e-27 125.6 112 56.2
FAN17G2621 Fragaria x ananassa HOM05D004148 ORTHO05D004709 5.9e-27 124.8 112 55.4
Nn2g14486 Nelumbo nucifera HOM05D004148 ORTHO05D004709 5.9e-27 124.8 140 49.3
FvH4_3g27030 Fragaria vesca HOM05D004148 ORTHO05D004709 2.2e-26 122.9 112 55.4
FvH4_4g33990 Fragaria vesca HOM05D004148 ORTHO05D004709 2.9e-26 122.5 112 54.5
FAN22G0787 Fragaria x ananassa HOM05D004148 ORTHO05D004709 2.9e-26 122.5 112 54.5
CANSAT54G2785 Cannabis sativa HOM05D004148 ORTHO05D004709 5.0e-26 121.7 112 55.4
TWI60G0836 Tripterygium wilfordii HOM05D004148 ORTHO05D004709 6.5e-26 121.3 140 50.0
Atru.chr3.3014 Acer truncatum HOM05D004148 ORTHO05D004709 8.5e-26 120.9 140 47.9
Ciclev10027694m.g Citrus clementina HOM05D004148 ORTHO05D004709 8.5e-26 120.9 140 48.6
Glyma.01G244400 Glycine max HOM05D004148 ORTHO05D004709 8.5e-26 120.9 140 49.3
QL01p018674 Quercus lobata HOM05D004148 ORTHO05D004709 1.4e-25 120.2 112 52.7
Lj1g0011831 Lotus japonicus HOM05D004148 ORTHO05D004709 1.9e-25 119.8 140 47.9
CSS0002631 Camellia sinensis var. sinensis HOM05D004148 ORTHO05D004709 2.5e-25 119.4 113 57.5
CSS0008927 Camellia sinensis var. sinensis HOM05D004148 ORTHO05D004709 2.5e-25 119.4 113 57.5
TAR623G1397 Trochodendron aralioides HOM05D004148 ORTHO05D004709 4.2e-25 118.6 140 47.1
Duzib168G1551 Durio zibethinus HOM05D004148 ORTHO05D004709 9.4e-25 117.5 140 47.9
Lalb_Chr16g0376251 Lupinus albus HOM05D004148 ORTHO05D004709 9.4e-25 117.5 140 48.6
arahy.Tifrunner.gnm1.ann1.J94639 Arachis hypogaea HOM05D004148 ORTHO05D004709 1.6e-24 116.7 112 55.4
Gohir.A05G076400 Gossypium hirsutum HOM05D004148 ORTHO05D004709 2.7e-24 115.9 140 45.7
Gohir.D05G079200 Gossypium hirsutum HOM05D004148 ORTHO05D004709 2.7e-24 115.9 140 45.7
Gorai.009G080700 Gossypium raimondii HOM05D004148 ORTHO05D004709 3.6e-24 115.5 140 45.7
Phvul.002G053700 Phaseolus vulgaris HOM05D004148 ORTHO05D004709 3.6e-24 115.5 140 47.1
VMungo1215G0285 Vigna mungo HOM05D004148 ORTHO05D004709 3.6e-24 115.5 140 47.1
Dinv32838 Davidia involucrata HOM05D004148 ORTHO05D004709 4.7e-24 115.2 112 53.6
Actinidia12896 Actinidia chinensis HOM05D001400 ORTHO05D001795 7.9e-24 114.4 114 54.4
THA.LOC104815063 Tarenaya hassleriana HOM05D004148 ORTHO05D004709 1.0e-23 114.0 111 48.6
CiPaw.13G126900 Carya illinoinensis HOM05D004148 ORTHO05D004709 1.8e-23 113.2 112 54.5
Aa31LG4G13420 Aethionema arabicum HOM05D004148 ORTHO05D004709 2.3e-23 112.8 111 52.3
Oeu048810.1 Olea europaea HOM05D004148 ORTHO05D004709 2.3e-23 112.8 112 51.8
PGR102G2778 Punica granatum HOM05D004148 ORTHO05D004709 3.0e-23 112.5 106 51.9
AUR62001591 Chenopodium quinoa HOM05D004148 ORTHO05D004709 3.9e-23 112.1 112 50.0
Haze_23626 Corylus avellana HOM05D004148 ORTHO05D004709 3.9e-23 112.1 126 50.8
Ca_24340_v3 Cicer arietinum L. HOM05D004148 ORTHO05D004709 6.7e-23 111.3 140 46.4
CsaV3_3G017640 Cucumis sativus L. HOM05D004148 ORTHO05D004709 6.7e-23 111.3 103 56.3
ClCG05G010880 Citrullus lanatus HOM05D004148 ORTHO05D004709 8.8e-23 110.9 106 54.7
Psat4g228400 Pisum sativum HOM05D004148 ORTHO05D004709 1.1e-22 110.5 140 46.4
Thecc.09G266000 Theobroma cacao HOM05D004148 ORTHO05D004709 1.1e-22 110.5 140 45.7
Medtr5g004880 Medicago truncatula HOM05D004148 ORTHO05D004709 1.5e-22 110.2 140 46.4
Cc00_g06190 Coffea canephora HOM05D004148 ORTHO05D004709 2.0e-22 109.8 101 56.4
MELO3C020298.2 Cucumis melo HOM05D004148 ORTHO05D004709 2.0e-22 109.8 103 55.3
ECA233G2337 Erigeron canadensis HOM05D004148 ORTHO05D004709 2.6e-22 109.4 112 50.9
AL5G21540 Arabidopsis lyrata HOM05D004148 ORTHO05D004709 4.4e-22 108.6 92 57.6
GSVIVG01022379001 Vitis vinifera HOM05D004148 ORTHO05D004709 4.4e-22 108.6 140 44.3
AT3G43610 Arabidopsis thaliana HOM05D004148 ORTHO05D004709 7.4e-22 107.8 92 56.5
Lsat_1_v5_gn_5_75780 Lactuca sativa HOM05D004148 ORTHO05D004709 9.7e-22 107.5 112 50.9
Sp5g17550 Schrenkiella parvula HOM05D004148 ORTHO05D004709 9.7e-22 107.5 92 57.6
BcaC01g02217 Brassica carinata HOM05D004148 ORTHO05D004709 1.3e-21 107.1 92 57.6
CARHR289540 Cardamine hirsuta HOM05D004148 ORTHO05D004709 2.2e-21 106.3 92 56.5
Nitab4.5_0005222g0040 Nicotiana tabacum HOM05D004148 ORTHO05D004709 2.2e-21 106.3 107 52.3
Nitab4.5_0000615g0090 Nicotiana tabacum HOM05D004148 ORTHO05D004709 2.8e-21 105.9 91 59.3
Sed0012220 Sechium edule HOM05D004148 ORTHO05D004709 2.8e-21 105.9 103 54.4
EL10Ac7g16248 Beta vulgaris HOM05D004148 ORTHO05D004709 3.7e-21 105.5 112 48.2
BcaB02g10777 Brassica carinata HOM05D004148 ORTHO05D004709 4.8e-21 105.1 92 56.5
BraA06t25067Z Brassica rapa HOM05D004148 ORTHO05D004709 4.8e-21 105.1 112 50.0
CAN.G439.18 Capsicum annuum HOM05D004148 ORTHO05D004709 4.8e-21 105.1 101 53.5
Thhalv10002374m.g Eutrema salsugineum HOM05D004148 ORTHO05D004709 6.3e-21 104.8 92 57.6
Carub.0005s0948 Capsella rubella HOM05D004148 ORTHO05D004709 1.4e-20 103.6 89 56.2
Ah.15g099170 Amaranthus hybridus HOM05D004148 ORTHO05D004709 1.8e-20 103.2 141 44.0
PSO339G2294 Papaver somniferum HOM05D004148 ORTHO05D004709 1.8e-20 103.2 111 48.6
BcaC01g01775 Brassica carinata HOM05D004148 ORTHO05D004709 2.4e-20 102.8 92 55.4
A06p19850 Brassica napus HOM05D004148 ORTHO05D004709 2.4e-20 102.8 92 55.4
C03p72000 Brassica napus HOM05D004148 ORTHO05D004709 2.4e-20 102.8 92 55.4
BolC3t19498H Brassica oleracea HOM05D004148 ORTHO05D004709 2.4e-20 102.8 92 55.4
Carub.0005s0933 Capsella rubella HOM05D004148 ORTHO05D004709 2.4e-20 102.8 89 55.1
HanXRQChr03g0089821 Helianthus annuus HOM05D004148 ORTHO05D004709 2.4e-20 102.8 98 53.1
PSO384G5014 Papaver somniferum HOM05D004148 ORTHO05D004709 3.1e-20 102.4 111 48.6
Solyc11g071570.3 Solanum lycopersicum HOM05D004148 ORTHO05D004709 3.1e-20 102.4 101 53.5
Sopen11g029250 Solanum pennellii HOM05D004148 ORTHO05D004709 4.1e-20 102.1 101 53.5
Peaxi162Scf00217g00627 Petunia axillaris HOM05D004148 ORTHO05D004709 5.3e-20 101.7 101 53.5
SGA_v2.0_scaffold29G12109 Striga asiatica HOM05D004148 ORTHO05D004709 1.5e-19 100.1 114 47.4
MSTRG.21311 Avicennia marina HOM05D004148 ORTHO05D004709 3.5e-19 99.0 93 52.7
Migut.D00721 Erythranthe guttata HOM05D004148 ORTHO05D004709 1.0e-18 97.4 112 45.5
MBI11_g07705_MAGBIO Magnolia biondii HOM05D004148 ORTHO05D004709 1.0e-18 97.4 140 42.1
ATR0697G020 Amborella trichopoda HOM05D004148 ORTHO05D004709 1.3e-18 97.1 112 46.4
Rhsim13G0199700 Rhododendron simsii HOM05D004148 ORTHO05D004709 1.1e-17 94.0 115 48.7
Aqoxy1G00551 Aquilegia oxysepala HOM05D004148 ORTHO05D004709 1.4e-17 93.6 106 47.2
Sc06g0008560 Simmondsia chinensis HOM05D004148 ORTHO05D004709 2.5e-17 92.8 93 51.6
vmacro04062 Vaccinium macrocarpon HOM05D004148 ORTHO05D004709 5.5e-17 91.7 114 48.2
Hund18819 Selenicereus undatus HOM05D004148 ORTHO05D004709 1.6e-16 90.1 105 46.7
Zm00001eb073760 Zea mays HOM05D004148 ORTHO05D004709 1.8e-15 86.7 93 47.3
unitig_21.g20311 Utricularia gibba HOM05D004148 ORTHO05D004709 6.7e-15 84.7 95 48.4
Zm00001eb428880 Zea mays HOM05D004148 ORTHO05D004709 6.7e-15 84.7 92 47.8
Cpa.g.sc103.96 Carica papaya HOM05D004148 ORTHO05D004709 8.8e-15 84.3 81 50.6
SalBow6G3333 Salvia bowleyana HOM05D004148 ORTHO05D004709 1.1e-14 84.0 142 38.0
Hma1.2p1_0218F.1_g092390 Hydrangea macrophylla HOM05D004148 ORTHO05D004709 4.4e-14 82.0 112 45.5
DCAR_012264 Daucus carota HOM05D000495 ORTHO05D000357 3.7e-13 79.0 125 40.8
AagrBONN_evm.TU.Sc2ySwM_228.375 Anthoceros agrestis HOM05D004148 ORTHO05D004709 1.0e-10 70.9 88 39.8
Lj2A891G11 Lonicera japonica HOM05D004148 ORTHO05D004709 2.9e-10 69.3 62 48.4
Mapoly0099s0003 Marchantia polymorpha HOM05D004148 ORTHO05D004709 9.4e-09 64.3 111 35.1
Pp3c11_24620 Physcomitrium patens HOM05D004148 ORTHO05D004709 9.4e-09 64.3 89 40.4
BcaB01g00875 Brassica carinata HOM05D004148 ORTHO05D004709 2.1e-08 63.2 48 60.4
Zm00001eb043190 Zea mays HOM05D004148 ORTHO05D006109 2.3e-07 59.7 81 44.4


User provided reference genes

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