Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI25264 Sapria himalayana HOM05D000002 ORTHO05D000001 4.1e-50 201.1 99 100.0
SHI04167 Sapria himalayana HOM05D000006 ORTHO05D000001 1.3e-19 99.8 96 58.3
SHI05082 Sapria himalayana HOM05D000006 ORTHO05D000001 3.7e-19 98.2 101 56.4
SHI43247 Sapria himalayana HOM05D000002 ORTHO05D000001 9.5e-15 83.6 116 49.1
SHI11283 Sapria himalayana HOM05D000002 ORTHO05D000001 2.8e-14 82.0 146 41.8
SHI03363 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-13 79.7 204 32.8
SHI26299 Sapria himalayana HOM05D000002 ORTHO05D000001 5.2e-13 77.8 49 75.5
SHI05496 Sapria himalayana HOM05D000002 ORTHO05D000001 6.8e-13 77.4 53 71.7
SHI29360 Sapria himalayana HOM05D000002 ORTHO05D000001 8.9e-13 77.0 49 75.5
SHI45231 Sapria himalayana HOM05D000006 ORTHO05D000001 1.5e-12 76.3 53 69.8
SHI03433 Sapria himalayana HOM05D000002 ORTHO05D000001 2.0e-12 75.9 49 75.5
SHI07653 Sapria himalayana HOM05D000002 ORTHO05D000001 2.0e-12 75.9 53 67.9
SHI15917 Sapria himalayana HOM05D000002 ORTHO05D000001 2.0e-12 75.9 49 75.5
SHI18479 Sapria himalayana HOM05D000002 ORTHO05D000001 2.0e-12 75.9 49 75.5
SHI26117 Sapria himalayana HOM05D000002 ORTHO05D000001 2.6e-12 75.5 49 75.5
SHI04722 Sapria himalayana HOM05D000006 ORTHO05D000001 3.4e-12 75.1 98 50.0
SHI17312 Sapria himalayana HOM05D000002 ORTHO05D000001 3.4e-12 75.1 49 75.5
SHI19029 Sapria himalayana HOM05D000002 ORTHO05D000001 3.4e-12 75.1 49 73.5
SHI29906 Sapria himalayana HOM05D000002 ORTHO05D000001 5.8e-12 74.3 49 73.5
SHI02948 Sapria himalayana HOM05D000002 ORTHO05D000001 7.5e-12 73.9 49 73.5
SHI19081 Sapria himalayana HOM05D000002 ORTHO05D000001 7.5e-12 73.9 53 66.0
SHI27648 Sapria himalayana HOM05D000002 ORTHO05D000001 7.5e-12 73.9 48 72.9
SHI28425 Sapria himalayana HOM05D000002 ORTHO05D000001 7.5e-12 73.9 49 73.5
SHI38273 Sapria himalayana HOM05D000002 ORTHO05D000001 7.5e-12 73.9 49 73.5
SHI33540 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-11 73.2 49 71.4
SHI07164 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-11 72.8 49 71.4
SHI03309 Sapria himalayana HOM05D000002 ORTHO05D000001 2.9e-11 72.0 218 29.8
SHI25859 Sapria himalayana HOM05D000006 ORTHO05D000001 3.7e-11 71.6 49 71.4
SHI49905 Sapria himalayana HOM05D000002 ORTHO05D000001 4.9e-11 71.2 49 71.4
SHI09144 Sapria himalayana HOM05D000002 ORTHO05D000001 6.4e-11 70.9 52 63.5
SHI00044 Sapria himalayana HOM05D000002 ORTHO05D000001 8.3e-11 70.5 49 71.4
SHI29748 Sapria himalayana HOM05D000002 ORTHO05D000001 8.3e-11 70.5 53 64.2
Sopen07g019560 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-10 69.3 96 41.7
PSO017G1069 Papaver somniferum HOM05D000002 ORTHO05D000001 5.4e-10 67.8 56 55.4
AUR62037960 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.6e-09 66.2 53 54.7
SHI33796 Sapria himalayana HOM05D000006 ORTHO05D000001 1.6e-09 66.2 53 62.3
Ca_22938_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.1e-09 65.9 127 32.3
RcHm_v2.0_Chr2g0121901 Rosa chinensis HOM05D000006 ORTHO05D000001 2.1e-09 65.9 49 61.2
SHI14663 Sapria himalayana HOM05D000006 ORTHO05D000001 2.1e-09 65.9 41 75.6
PSO832G0354 Papaver somniferum HOM05D000924 ORTHO05D007614 4.6e-09 64.7 141 33.3
SHI01956 Sapria himalayana HOM05D000006 ORTHO05D000001 4.6e-09 64.7 48 68.8
SHI18217 Sapria himalayana HOM05D000006 ORTHO05D000001 4.6e-09 64.7 48 64.6
SHI30134 Sapria himalayana HOM05D000002 ORTHO05D000001 4.6e-09 64.7 53 62.3
SHI32858 Sapria himalayana HOM05D000006 ORTHO05D000001 6.0e-09 64.3 39 76.9
Rhsim10G0098100 Rhododendron simsii HOM05D000006 ORTHO05D010036 7.8e-09 63.9 55 56.4
SHI10453 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-08 63.5 49 63.3
SHI17760 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-08 63.2 49 65.3
SHI27928 Sapria himalayana HOM05D000006 ORTHO05D000001 1.3e-08 63.2 77 45.5
PSO541G5368 Papaver somniferum HOM05D000006 ORTHO05D000001 1.7e-08 62.8 98 37.8
SHI02823 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-08 62.8 48 64.6
SHI05324 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-08 62.8 55 56.4
CSS0015841 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.3e-08 62.4 49 59.2
CSS0046072 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.3e-08 62.4 49 59.2
CSS0050078 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.3e-08 62.4 49 59.2
SHI11265 Sapria himalayana HOM05D000006 ORTHO05D000001 2.3e-08 62.4 41 70.7
SHI51724 Sapria himalayana HOM05D000002 ORTHO05D000001 3.0e-08 62.0 93 44.1
Sopen12g023020 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-08 62.0 56 51.8
TPR.G184 Trifolium pratense HOM05D000006 ORTHO05D000001 3.0e-08 62.0 49 59.2
SHI09590 Sapria himalayana HOM05D000002 ORTHO05D000001 3.9e-08 61.6 49 59.2
Sopen01g013480 Solanum pennellii HOM05D000002 ORTHO05D000001 3.9e-08 61.6 176 29.0
VMungo1309G0780 Vigna mungo HOM05D000002 ORTHO05D000001 3.9e-08 61.6 53 50.9
RhsimUnG0203300 Rhododendron simsii HOM05D000002 ORTHO05D000001 5.1e-08 61.2 51 58.8
SHI00981 Sapria himalayana HOM05D000002 ORTHO05D000001 5.1e-08 61.2 41 70.7
SHI18341 Sapria himalayana HOM05D000002 ORTHO05D000001 8.6e-08 60.5 53 60.4
PSO210G4817 Papaver somniferum HOM05D000002 ORTHO05D000001 1.1e-07 60.1 149 28.9
Rhsim12G0031500 Rhododendron simsii HOM05D000101 ORTHO05D003282 1.1e-07 60.1 51 58.8
Atru.chr5.2717 Acer truncatum HOM05D000002 ORTHO05D000001 1.5e-07 59.7 48 58.3
ECA232G4093 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-07 59.7 142 31.7
PSO190G0010 Papaver somniferum HOM05D000006 ORTHO05D000001 1.5e-07 59.7 42 61.9
Rhsim10G0062100 Rhododendron simsii HOM05D000006 ORTHO05D000001 1.5e-07 59.7 51 58.8
Sopen01g018550 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-07 59.7 102 33.3
Sopen01g020940 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-07 59.7 94 37.2
MD01G1101100 Malus domestica HOM05D000002 ORTHO05D000001 1.9e-07 59.3 52 53.8
Rhsim09G0174500 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.9e-07 59.3 56 55.4
CSS0031781 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.5e-07 58.9 54 48.1
SHI07161 Sapria himalayana HOM05D000002 ORTHO05D000001 2.5e-07 58.9 65 43.1
Rhsim11G0139100 Rhododendron simsii HOM05D000006 ORTHO05D010267 3.3e-07 58.5 55 50.9
SHI47022 Sapria himalayana HOM05D000002 ORTHO05D000001 3.3e-07 58.5 41 68.3
Sopen10g019480 Solanum pennellii HOM05D000002 ORTHO05D000001 3.3e-07 58.5 64 40.6
Sopen01g014240 Solanum pennellii HOM05D000002 ORTHO05D000001 4.3e-07 58.2 99 33.3
arahy.Tifrunner.gnm1.ann1.2CQC5M Arachis hypogaea HOM05D000002 ORTHO05D000001 5.6e-07 57.8 48 56.2
CSS0007316 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.6e-07 57.8 48 56.2
CSS0008175 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.6e-07 57.8 49 57.1
CSS0045479 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.6e-07 57.8 53 49.1
Rhsim12G0120600 Rhododendron simsii HOM05D000002 ORTHO05D000001 5.6e-07 57.8 56 53.6
SHI01142 Sapria himalayana HOM05D000006 ORTHO05D000001 5.6e-07 57.8 41 63.4
SHI29315 Sapria himalayana HOM05D000006 ORTHO05D000001 5.6e-07 57.8 41 65.9
SHI45177 Sapria himalayana HOM05D000006 ORTHO05D000001 5.6e-07 57.8 41 65.9
SHI45230 Sapria himalayana HOM05D000002 ORTHO05D000001 5.6e-07 57.8 52 61.5
TPR.G7066 Trifolium pratense HOM05D000002 ORTHO05D000001 5.6e-07 57.8 48 52.1
CSS0029702 Camellia sinensis var. sinensis HOM05D000006 ORTHO05D000001 7.3e-07 57.4 48 52.1
Manes.13G070650 Manihot esculenta HOM05D000002 ORTHO05D000001 7.3e-07 57.4 48 54.2
SHI10556 Sapria himalayana HOM05D000002 ORTHO05D000001 7.3e-07 57.4 41 65.9
SHI27925 Sapria himalayana HOM05D000002 ORTHO05D000001 7.3e-07 57.4 53 60.4
Sopen07g013220 Solanum pennellii HOM05D000002 ORTHO05D000001 7.3e-07 57.4 55 45.5
PSO384G2111 Papaver somniferum HOM05D000006 ORTHO05D000001 9.5e-07 57.0 67 43.3
PSO478G3477 Papaver somniferum HOM05D000002 ORTHO05D000001 9.5e-07 57.0 129 33.3
Sopen01g017420 Solanum pennellii HOM05D000002 ORTHO05D000001 9.5e-07 57.0 57 52.6
Sopen05g007860 Solanum pennellii HOM05D000002 ORTHO05D000001 9.5e-07 57.0 57 52.6
Sopen05g010950 Solanum pennellii HOM05D000002 ORTHO05D000001 9.5e-07 57.0 57 52.6
Sopen05g018370 Solanum pennellii HOM05D000002 ORTHO05D000001 9.5e-07 57.0 57 52.6
Sopen09g026420 Solanum pennellii HOM05D000002 ORTHO05D000001 9.5e-07 57.0 64 39.1
HanXRQChr08g0228041 Helianthus annuus HOM05D000002 ORTHO05D000001 1.2e-06 56.6 93 34.4
SHI12814 Sapria himalayana HOM05D000006 ORTHO05D000001 1.2e-06 56.6 45 60.0
Sopen01g025590 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 56.6 64 39.1
Sopen01g025600 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 56.6 64 39.1
Sopen01g027290 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 56.6 64 39.1
Sopen02g015230 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 56.6 123 29.3
Sopen04g013470 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 56.6 78 35.9
Sopen05g007000 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 56.6 64 39.1
Sopen10g007390 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 56.6 64 39.1
Sopen10g020560 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 56.6 64 39.1
Sopen10g024570 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 56.6 64 39.1
Sopen12g009690 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 56.6 64 39.1
Sopen12g027910 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 56.6 64 39.1
CSS0038200 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-06 56.2 176 28.4
AUR62030420 Chenopodium quinoa HOM05D002321 ORTHO05D007292 1.6e-06 56.2 40 62.5
QL03p042293 Quercus lobata HOM05D000002 ORTHO05D000001 1.6e-06 56.2 48 47.9
QL04p083744 Quercus lobata HOM05D000002 ORTHO05D000001 1.6e-06 56.2 48 47.9
QL09p045312 Quercus lobata HOM05D000002 ORTHO05D000001 1.6e-06 56.2 48 47.9
QL12p033733 Quercus lobata HOM05D000002 ORTHO05D000001 1.6e-06 56.2 48 47.9
RcHm_v2.0_Chr1g0330721 Rosa chinensis HOM05D000002 ORTHO05D000001 1.6e-06 56.2 51 49.0
SHI11266 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-06 56.2 52 59.6
MD02G1295200 Malus domestica HOM05D000002 ORTHO05D000001 2.1e-06 55.8 52 55.8
Rhsim09G0033700 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.1e-06 55.8 55 49.1
SHI05421 Sapria himalayana HOM05D000002 ORTHO05D000001 2.1e-06 55.8 86 37.2
SHI13785 Sapria himalayana HOM05D000002 ORTHO05D000001 2.1e-06 55.8 86 38.4
SHI28872 Sapria himalayana HOM05D000002 ORTHO05D000001 2.1e-06 55.8 46 65.2
SHI44369 Sapria himalayana HOM05D000002 ORTHO05D000001 2.1e-06 55.8 52 59.6
Sopen05g010210 Solanum pennellii HOM05D000002 ORTHO05D000001 2.1e-06 55.8 55 49.1
Sopen05g015450 Solanum pennellii HOM05D000002 ORTHO05D000001 2.1e-06 55.8 64 39.1
Sopen06g019130 Solanum pennellii HOM05D000002 ORTHO05D000001 2.1e-06 55.8 55 49.1
Sopen10g016240 Solanum pennellii HOM05D000002 ORTHO05D000001 2.1e-06 55.8 55 49.1
Sopen10g031560 Solanum pennellii HOM05D000002 ORTHO05D000001 2.1e-06 55.8 55 49.1
Sopen11g010630 Solanum pennellii HOM05D000002 ORTHO05D000001 2.1e-06 55.8 55 49.1
TPR.G23045 Trifolium pratense HOM05D000002 ORTHO05D000001 2.1e-06 55.8 55 47.3
CSS0044837 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.8e-06 55.5 55 45.5
CSS0050085 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.8e-06 55.5 55 45.5
AUR62018848 Chenopodium quinoa HOM05D000006 ORTHO05D000001 2.8e-06 55.5 48 47.9
ECA236G2735 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.8e-06 55.5 53 49.1
Rhsim10G0139300 Rhododendron simsii HOM05D000006 ORTHO05D000001 2.8e-06 55.5 46 54.3
RcHm_v2.0_Chr2g0154461 Rosa chinensis HOM05D000002 ORTHO05D000001 2.8e-06 55.5 48 56.2
RcHm_v2.0_Chr3g0453691 Rosa chinensis HOM05D000002 ORTHO05D000001 2.8e-06 55.5 48 56.2
RcHm_v2.0_Chr7g0237911 Rosa chinensis HOM05D000002 ORTHO05D000001 2.8e-06 55.5 51 49.0
SHI02588 Sapria himalayana HOM05D000002 ORTHO05D000001 2.8e-06 55.5 54 46.3
SHI27159 Sapria himalayana HOM05D000002 ORTHO05D000001 2.8e-06 55.5 51 49.0
Sopen12g010580 Solanum pennellii HOM05D000014 ORTHO05D000093 2.8e-06 55.5 57 52.6
TPR.G1944 Trifolium pratense HOM05D000002 ORTHO05D000001 2.8e-06 55.5 48 52.1
CSS0030817 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.6e-06 55.1 55 45.5
CSS0045881 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.6e-06 55.1 45 64.4
ECA240G3412 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.6e-06 55.1 48 54.2
ECA246G0354 Erigeron canadensis HOM05D000230 ORTHO05D000176 3.6e-06 55.1 50 50.0
PSO478G1042 Papaver somniferum HOM05D000006 ORTHO05D000001 3.6e-06 55.1 50 52.0
Rhsim02G0113200 Rhododendron simsii HOM05D000002 ORTHO05D000001 3.6e-06 55.1 48 52.1
Solyc04g150114.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 3.6e-06 55.1 97 34.0
Sopen07g006000 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-06 55.1 54 48.1
Sopen07g022320 Solanum pennellii HOM05D000309 ORTHO05D000271 3.6e-06 55.1 54 48.1
Sopen08g007840 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-06 55.1 54 48.1
Sopen08g029210 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-06 55.1 54 48.1
TPR.G36326 Trifolium pratense HOM05D000002 ORTHO05D000001 3.6e-06 55.1 57 47.4
CSS0028252 Camellia sinensis var. sinensis HOM05D000006 ORTHO05D000001 4.7e-06 54.7 53 47.2
Ca_21025_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 4.7e-06 54.7 96 37.5
ECA246G5056 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.7e-06 54.7 103 33.0
SHI07149 Sapria himalayana HOM05D000002 ORTHO05D000001 4.7e-06 54.7 46 63.0
SHI27698 Sapria himalayana HOM05D000002 ORTHO05D000001 4.7e-06 54.7 42 66.7
SHI33568 Sapria himalayana HOM05D000006 ORTHO05D000001 4.7e-06 54.7 41 68.3
CSS0036146 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.2e-06 54.3 55 45.5
CSS0040477 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.2e-06 54.3 54 44.4
ECA232G1933 Erigeron canadensis HOM05D000153 ORTHO05D000118 6.2e-06 54.3 64 40.6
SHI09569 Sapria himalayana HOM05D000002 ORTHO05D000001 6.2e-06 54.3 52 50.0
SHI10010 Sapria himalayana HOM05D000002 ORTHO05D000001 6.2e-06 54.3 51 49.0
SHI11263 Sapria himalayana HOM05D000002 ORTHO05D000001 6.2e-06 54.3 89 34.8
SHI17135 Sapria himalayana HOM05D000002 ORTHO05D000001 6.2e-06 54.3 51 49.0
SHI19030 Sapria himalayana HOM05D000002 ORTHO05D000001 6.2e-06 54.3 47 59.6
SHI35072 Sapria himalayana HOM05D000002 ORTHO05D000001 6.2e-06 54.3 85 41.2
Sopen01g027030 Solanum pennellii HOM05D000002 ORTHO05D000001 6.2e-06 54.3 95 28.4
Sopen10g020080 Solanum pennellii HOM05D000002 ORTHO05D010949 6.2e-06 54.3 93 31.2
SHI02145 Sapria himalayana HOM05D000002 ORTHO05D000001 8.1e-06 53.9 51 47.1
SHI05652 Sapria himalayana HOM05D000002 ORTHO05D000001 8.1e-06 53.9 52 57.7
SHI21792 Sapria himalayana HOM05D000002 ORTHO05D000001 8.1e-06 53.9 73 41.1
SHI29413 Sapria himalayana HOM05D000532 ORTHO05D001528 8.1e-06 53.9 37 70.3
SHI44613 Sapria himalayana HOM05D000002 ORTHO05D000001 8.1e-06 53.9 52 57.7
Sopen02g024250 Solanum pennellii HOM05D000002 ORTHO05D000001 8.1e-06 53.9 57 50.9
TPR.G36222 Trifolium pratense HOM05D000006 ORTHO05D000001 8.1e-06 53.9 53 50.9


User provided reference genes

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