Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI24468 Sapria himalayana HOM05D000392 ORTHO05D002065 9.3e-90 333.6 174 100.0
Atru.chr10.1217 Acer truncatum HOM05D000002 ORTHO05D002065 2.0e-28 129.8 120 59.2
Rhsim03G0114900 Rhododendron simsii HOM05D000002 ORTHO05D002065 3.8e-27 125.6 130 54.6
Rhsim07G0041900 Rhododendron simsii HOM05D000002 ORTHO05D002065 1.9e-26 123.2 121 55.4
Rhsim01G0238600 Rhododendron simsii HOM05D000002 ORTHO05D002065 5.5e-26 121.7 121 54.5
ECA233G3654 Erigeron canadensis HOM05D000392 ORTHO05D002065 4.7e-25 118.6 133 48.9
RcHm_v2.0_Chr2g0150891 Rosa chinensis HOM05D000002 ORTHO05D002065 1.4e-24 117.1 134 50.0
Sopen04g029040 Solanum pennellii HOM05D000002 ORTHO05D002065 1.4e-24 117.1 121 53.7
Sopen06g028770 Solanum pennellii HOM05D000002 ORTHO05D002065 1.4e-24 117.1 121 53.7
Sopen10g028630 Solanum pennellii HOM05D000002 ORTHO05D002065 1.4e-24 117.1 121 53.7
Sopen12g020570 Solanum pennellii HOM05D000002 ORTHO05D002065 1.4e-24 117.1 121 53.7
Sopen12g028980 Solanum pennellii HOM05D000002 ORTHO05D002065 1.4e-24 117.1 121 53.7
PSO478G0776 Papaver somniferum HOM05D000002 ORTHO05D002065 2.3e-24 116.3 134 51.5
Sopen03g010500 Solanum pennellii HOM05D000002 ORTHO05D002065 3.0e-24 115.9 133 50.4
Sopen10g024560 Solanum pennellii HOM05D000002 ORTHO05D002065 3.0e-24 115.9 121 53.7
RcHm_v2.0_Chr2g0138291 Rosa chinensis HOM05D000002 ORTHO05D002065 5.2e-24 115.2 134 49.3
RcHm_v2.0_Chr7g0186831 Rosa chinensis HOM05D000002 ORTHO05D002065 5.2e-24 115.2 134 49.3
Sopen01g036580 Solanum pennellii HOM05D000002 ORTHO05D002065 5.2e-24 115.2 121 52.9
Sopen02g013820 Solanum pennellii HOM05D000002 ORTHO05D002065 5.2e-24 115.2 121 52.9
Sopen03g006780 Solanum pennellii HOM05D000002 ORTHO05D002065 5.2e-24 115.2 121 52.9
Sopen03g030560 Solanum pennellii HOM05D000002 ORTHO05D002065 5.2e-24 115.2 121 52.9
Sopen11g008810 Solanum pennellii HOM05D000002 ORTHO05D002065 5.2e-24 115.2 121 52.9
RcHm_v2.0_Chr1g0323091 Rosa chinensis HOM05D000002 ORTHO05D002065 6.8e-24 114.8 134 50.0
Sopen04g008860 Solanum pennellii HOM05D000002 ORTHO05D002065 8.9e-24 114.4 121 52.9
Sopen07g029130 Solanum pennellii HOM05D000002 ORTHO05D002065 1.2e-23 114.0 121 52.1
Sopen08g008670 Solanum pennellii HOM05D000002 ORTHO05D002065 2.0e-23 113.2 121 52.1
RcHm_v2.0_Chr2g0148911 Rosa chinensis HOM05D000002 ORTHO05D002065 2.6e-23 112.8 134 49.3
Sopen04g006270 Solanum pennellii HOM05D000392 ORTHO05D000610 2.6e-23 112.8 121 52.1
Sopen05g026210 Solanum pennellii HOM05D000002 ORTHO05D002065 3.4e-23 112.5 121 52.1
Sopen08g009910 Solanum pennellii HOM05D000002 ORTHO05D002065 3.4e-23 112.5 132 49.2
Sopen08g009950 Solanum pennellii HOM05D000002 ORTHO05D002065 3.4e-23 112.5 132 49.2
Sopen01g006130 Solanum pennellii HOM05D000002 ORTHO05D002065 4.4e-23 112.1 121 52.1
Sopen01g019060 Solanum pennellii HOM05D000002 ORTHO05D002065 4.4e-23 112.1 121 52.1
Sopen01g024170 Solanum pennellii HOM05D000002 ORTHO05D002065 4.4e-23 112.1 121 52.1
Sopen01g026840 Solanum pennellii HOM05D000002 ORTHO05D002065 4.4e-23 112.1 121 52.1
Sopen03g026840 Solanum pennellii HOM05D000002 ORTHO05D002065 4.4e-23 112.1 121 52.1
Sopen04g024530 Solanum pennellii HOM05D000002 ORTHO05D002065 4.4e-23 112.1 121 52.1
Sopen05g021470 Solanum pennellii HOM05D000002 ORTHO05D002065 4.4e-23 112.1 121 52.1
Sopen05g026510 Solanum pennellii HOM05D000002 ORTHO05D002065 4.4e-23 112.1 121 52.1
Sopen05g029240 Solanum pennellii HOM05D000392 ORTHO05D002065 4.4e-23 112.1 121 52.1
Sopen06g012160 Solanum pennellii HOM05D000002 ORTHO05D002065 4.4e-23 112.1 121 52.1
Sopen06g014830 Solanum pennellii HOM05D000002 ORTHO05D002065 4.4e-23 112.1 121 52.1
Sopen07g005570 Solanum pennellii HOM05D000002 ORTHO05D002065 4.4e-23 112.1 121 52.1
Sopen08g025440 Solanum pennellii HOM05D000002 ORTHO05D002065 4.4e-23 112.1 121 52.1
Sopen09g024720 Solanum pennellii HOM05D000392 ORTHO05D002065 4.4e-23 112.1 121 52.1
Sopen11g025130 Solanum pennellii HOM05D000002 ORTHO05D002065 4.4e-23 112.1 121 52.1
Sopen12g021410 Solanum pennellii HOM05D000002 ORTHO05D002065 4.4e-23 112.1 121 52.1
Sopen12g021690 Solanum pennellii HOM05D000002 ORTHO05D002065 4.4e-23 112.1 121 52.1
Sopen12g022710 Solanum pennellii HOM05D000002 ORTHO05D002065 4.4e-23 112.1 121 52.1
Sopen01g005920 Solanum pennellii HOM05D000392 ORTHO05D002065 5.7e-23 111.7 121 52.1
Sopen02g003080 Solanum pennellii HOM05D000002 ORTHO05D002065 5.7e-23 111.7 121 52.1
Sopen02g017660 Solanum pennellii HOM05D000392 ORTHO05D002065 5.7e-23 111.7 121 52.1
Sopen02g030500 Solanum pennellii HOM05D000392 ORTHO05D002065 5.7e-23 111.7 121 52.1
Sopen03g036760 Solanum pennellii HOM05D000392 ORTHO05D002065 5.7e-23 111.7 121 52.1
Sopen04g018150 Solanum pennellii HOM05D000006 ORTHO05D002065 5.7e-23 111.7 121 52.1
Sopen04g023800 Solanum pennellii HOM05D000392 ORTHO05D002065 5.7e-23 111.7 121 52.1
Sopen04g025720 Solanum pennellii HOM05D000002 ORTHO05D002065 5.7e-23 111.7 121 52.1
Sopen05g001590 Solanum pennellii HOM05D000392 ORTHO05D000001 5.7e-23 111.7 121 52.1
Sopen05g006720 Solanum pennellii HOM05D000392 ORTHO05D002065 5.7e-23 111.7 121 52.1
Sopen05g025330 Solanum pennellii HOM05D000002 ORTHO05D002065 5.7e-23 111.7 121 52.1
Sopen06g003740 Solanum pennellii HOM05D000392 ORTHO05D002065 5.7e-23 111.7 121 52.1
Sopen06g019790 Solanum pennellii HOM05D000002 ORTHO05D002065 5.7e-23 111.7 121 52.1
Sopen06g020490 Solanum pennellii HOM05D000392 ORTHO05D002065 5.7e-23 111.7 121 52.1
Sopen06g021220 Solanum pennellii HOM05D000392 ORTHO05D002065 5.7e-23 111.7 121 52.1
Sopen06g025370 Solanum pennellii HOM05D000392 ORTHO05D002065 5.7e-23 111.7 121 52.1
Sopen06g029030 Solanum pennellii HOM05D000392 ORTHO05D002065 5.7e-23 111.7 121 52.1
Sopen07g020050 Solanum pennellii HOM05D000002 ORTHO05D002065 5.7e-23 111.7 121 52.1
Sopen07g022000 Solanum pennellii HOM05D000392 ORTHO05D002065 5.7e-23 111.7 121 52.1
Sopen07g028380 Solanum pennellii HOM05D000392 ORTHO05D002065 5.7e-23 111.7 121 52.1
Sopen07g032760 Solanum pennellii HOM05D000392 ORTHO05D002065 5.7e-23 111.7 121 52.1
Sopen07g033180 Solanum pennellii HOM05D000392 ORTHO05D002065 5.7e-23 111.7 121 52.1
Sopen08g018170 Solanum pennellii HOM05D000002 ORTHO05D002065 5.7e-23 111.7 121 52.1
Sopen08g029640 Solanum pennellii HOM05D000392 ORTHO05D002065 5.7e-23 111.7 121 52.1
Sopen09g007350 Solanum pennellii HOM05D000392 ORTHO05D002065 5.7e-23 111.7 121 52.1
Sopen09g007940 Solanum pennellii HOM05D000392 ORTHO05D002065 5.7e-23 111.7 121 52.1
Sopen09g010790 Solanum pennellii HOM05D000392 ORTHO05D002065 5.7e-23 111.7 121 52.1
Sopen09g015720 Solanum pennellii HOM05D000392 ORTHO05D002065 5.7e-23 111.7 121 52.1
Sopen09g027600 Solanum pennellii HOM05D000392 ORTHO05D002065 5.7e-23 111.7 121 52.1
Sopen09g031920 Solanum pennellii HOM05D000002 ORTHO05D002065 5.7e-23 111.7 121 52.1
Sopen10g010780 Solanum pennellii HOM05D000002 ORTHO05D002065 5.7e-23 111.7 121 52.1
Sopen10g021220 Solanum pennellii HOM05D000392 ORTHO05D002065 5.7e-23 111.7 121 52.1
Sopen11g010530 Solanum pennellii HOM05D000002 ORTHO05D002065 5.7e-23 111.7 121 52.1
Sopen11g026270 Solanum pennellii HOM05D000392 ORTHO05D002065 5.7e-23 111.7 121 52.1
Sopen12g020430 Solanum pennellii HOM05D000392 ORTHO05D002065 5.7e-23 111.7 121 52.1
Sopen12g023100 Solanum pennellii HOM05D000392 ORTHO05D002065 5.7e-23 111.7 121 52.1
RcHm_v2.0_Chr5g0012171 Rosa chinensis HOM05D000002 ORTHO05D002065 7.5e-23 111.3 134 48.5
RcHm_v2.0_Chr7g0185711 Rosa chinensis HOM05D000002 ORTHO05D002065 7.5e-23 111.3 134 48.5
Sopen04g026730 Solanum pennellii HOM05D000392 ORTHO05D002065 7.5e-23 111.3 138 48.6
Sopen02g016360 Solanum pennellii HOM05D000002 ORTHO05D002065 9.8e-23 110.9 121 51.2
Sopen06g006170 Solanum pennellii HOM05D000002 ORTHO05D002065 1.7e-22 110.2 121 51.2
Sopen05g028270 Solanum pennellii HOM05D000002 ORTHO05D002065 2.2e-22 109.8 121 50.4
Sopen11g017220 Solanum pennellii HOM05D000002 ORTHO05D002065 2.2e-22 109.8 121 51.2
HanXRQChr15g0481031 Helianthus annuus HOM05D000002 ORTHO05D002065 2.8e-22 109.4 127 50.4
Sopen01g015900 Solanum pennellii HOM05D000002 ORTHO05D002065 3.7e-22 109.0 119 51.3
ECA247G0139 Erigeron canadensis HOM05D000002 ORTHO05D002065 4.9e-22 108.6 121 49.6
FvH4_6g44542 Fragaria vesca HOM05D000002 ORTHO05D002065 4.9e-22 108.6 134 48.5
PSO675G0833 Papaver somniferum HOM05D000003 ORTHO05D000004 4.9e-22 108.6 134 48.5
Sopen02g022980 Solanum pennellii HOM05D000002 ORTHO05D002065 4.9e-22 108.6 121 50.4
Sopen03g019930 Solanum pennellii HOM05D000002 ORTHO05D002065 4.9e-22 108.6 121 51.2
Sopen07g012530 Solanum pennellii HOM05D000002 ORTHO05D002065 4.9e-22 108.6 121 51.2
Sopen08g005170 Solanum pennellii HOM05D000002 ORTHO05D002065 4.9e-22 108.6 121 51.2
Sopen11g010460 Solanum pennellii HOM05D000002 ORTHO05D002065 4.9e-22 108.6 121 50.4
RcHm_v2.0_Chr1g0367381 Rosa chinensis HOM05D000002 ORTHO05D002065 8.3e-22 107.8 134 46.3
Sopen06g015990 Solanum pennellii HOM05D000002 ORTHO05D002065 1.1e-21 107.5 128 48.4
Sopen06g006920 Solanum pennellii HOM05D000002 ORTHO05D002065 1.4e-21 107.1 119 51.3
Sopen02g010090 Solanum pennellii HOM05D000002 ORTHO05D002065 1.8e-21 106.7 121 50.4
Sopen03g018110 Solanum pennellii HOM05D000002 ORTHO05D002065 1.8e-21 106.7 121 49.6
Sopen06g017280 Solanum pennellii HOM05D000002 ORTHO05D002065 1.8e-21 106.7 121 49.6
Sopen11g024270 Solanum pennellii HOM05D000002 ORTHO05D002065 1.8e-21 106.7 126 48.4
Sopen04g012860 Solanum pennellii HOM05D000002 ORTHO05D002065 2.4e-21 106.3 115 53.0
Sopen09g029440 Solanum pennellii HOM05D000002 ORTHO05D002065 2.4e-21 106.3 133 46.6
Sopen11g021220 Solanum pennellii HOM05D000392 ORTHO05D000610 2.4e-21 106.3 121 50.4
RcHm_v2.0_Chr3g0491271 Rosa chinensis HOM05D000002 ORTHO05D002065 3.1e-21 105.9 122 49.2
Sopen07g024680 Solanum pennellii HOM05D000002 ORTHO05D002065 3.1e-21 105.9 121 49.6
Sopen04g007580 Solanum pennellii HOM05D000395 ORTHO05D002065 2.7e-20 102.8 119 49.6
Sopen08g005930 Solanum pennellii HOM05D000002 ORTHO05D002065 3.5e-20 102.4 120 50.8
Sopen09g030360 Solanum pennellii HOM05D000002 ORTHO05D002065 3.5e-20 102.4 105 54.3
Sopen10g023800 Solanum pennellii HOM05D000002 ORTHO05D002065 4.5e-20 102.1 114 50.0
TPR.G40444 Trifolium pratense HOM05D000002 ORTHO05D002065 7.8e-20 101.3 127 44.1
CAN.G1398.6 Capsicum annuum HOM05D001300 ORTHO05D004991 3.3e-18 95.9 121 45.5
CAN.G1166.13 Capsicum annuum HOM05D003532 ORTHO05D003298 2.8e-17 92.8 127 44.9
Sopen11g025450 Solanum pennellii HOM05D000002 ORTHO05D002065 1.0e-16 90.9 101 49.5
Atru.chr6.2292 Acer truncatum HOM05D000002 ORTHO05D002065 1.4e-16 90.5 96 52.1
FvH4_4g13933 Fragaria vesca HOM05D000002 ORTHO05D002065 3.4e-15 85.9 124 42.7
SHI00385 Sapria himalayana HOM05D000392 ORTHO05D002065 5.8e-15 85.1 94 51.1
Sopen11g016080 Solanum pennellii HOM05D000002 ORTHO05D002065 5.8e-15 85.1 106 48.1
Sopen01g017650 Solanum pennellii HOM05D000002 ORTHO05D002065 7.5e-15 84.7 94 48.9
Sopen06g018660 Solanum pennellii HOM05D000392 ORTHO05D002065 4.9e-14 82.0 79 57.0
ECA240G3077 Erigeron canadensis HOM05D002958 ORTHO05D003558 8.3e-14 81.3 88 46.6
ECA232G1868 Erigeron canadensis HOM05D000002 ORTHO05D002065 1.1e-13 80.9 156 36.5
Atru.chr7.457 Acer truncatum HOM05D000392 ORTHO05D002065 1.8e-13 80.1 71 62.0
Sopen04g013080 Solanum pennellii HOM05D000002 ORTHO05D002065 1.8e-13 80.1 79 57.0
SHI32075 Sapria himalayana HOM05D000392 ORTHO05D002065 4.1e-13 79.0 100 42.0
SHI24009 Sapria himalayana HOM05D000392 ORTHO05D002065 9.2e-13 77.8 111 40.5
SHI13561 Sapria himalayana HOM05D000014 ORTHO05D002065 2.7e-12 76.3 102 45.1
Sopen10g006660 Solanum pennellii HOM05D000392 ORTHO05D002065 4.6e-12 75.5 79 51.9
SHI11732 Sapria himalayana HOM05D000392 ORTHO05D002065 1.3e-11 73.9 63 55.6
ECA236G3098 Erigeron canadensis HOM05D000006 ORTHO05D002065 1.7e-11 73.6 84 48.8
Thhalv10011182m.g Eutrema salsugineum HOM05D003502 ORTHO05D004250 1.1e-10 70.9 90 43.3
SHI10813 Sapria himalayana HOM05D000392 ORTHO05D002065 3.3e-10 69.3 75 50.7
Sopen12g008380 Solanum pennellii HOM05D000002 ORTHO05D002065 5.6e-10 68.6 77 50.6
SHI16422 Sapria himalayana HOM05D000392 ORTHO05D002065 9.5e-10 67.8 80 46.2
HanXRQChr17g0541591 Helianthus annuus HOM05D000002 ORTHO05D002065 1.2e-09 67.4 68 52.9
PSO832G0813 Papaver somniferum HOM05D000002 ORTHO05D002065 1.6e-09 67.0 95 44.2
SHI11937 Sapria himalayana HOM05D000392 ORTHO05D002065 1.6e-09 67.0 81 45.7
SHI27204 Sapria himalayana HOM05D000392 ORTHO05D002065 2.8e-09 66.2 49 71.4
PSO339G0063 Papaver somniferum HOM05D000392 ORTHO05D002065 3.6e-09 65.9 95 44.2
ClCG05G011950 Citrullus lanatus HOM05D000337 ORTHO05D000297 1.1e-08 64.3 88 38.6
FvH4_6g39331 Fragaria vesca HOM05D000002 ORTHO05D002065 2.3e-08 63.2 53 60.4
SHI17094 Sapria himalayana HOM05D000392 ORTHO05D002065 3.1e-08 62.8 117 37.6
RcHm_v2.0_Chr4g0388351 Rosa chinensis HOM05D000002 ORTHO05D002065 4.0e-08 62.4 130 36.9
FvH4_4g11951 Fragaria vesca HOM05D000392 ORTHO05D002065 1.5e-07 60.5 66 51.5
PGSC0003DMG400029043 Solanum tuberosum HOM05D000006 ORTHO05D000001 9.8e-07 57.8 119 34.5
SHI18174 Sapria himalayana HOM05D000002 ORTHO05D002065 1.3e-06 57.4 65 47.7
SHI27464 Sapria himalayana HOM05D000002 ORTHO05D002065 1.3e-06 57.4 53 54.7
SHI34819 Sapria himalayana HOM05D000105 ORTHO05D000023 2.2e-06 56.6 55 50.9
PGSC0003DMG400021935 Solanum tuberosum HOM05D000006 ORTHO05D000001 3.7e-06 55.8 119 33.6
CSS0006258 Camellia sinensis var. sinensis HOM05D000006 ORTHO05D000001 4.9e-06 55.5 119 32.8
CSS0040477 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.9e-06 55.5 119 32.8
Sopen07g021750 Solanum pennellii HOM05D000002 ORTHO05D002065 8.3e-06 54.7 65 47.7


User provided reference genes

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