Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI21482 Sapria himalayana HOM05D000070 ORTHO05D006683 7.6e-183 643.7 316 100.0
Potri.011G141400 Populus trichocarpa HOM05D000070 ORTHO05D006683 1.1e-77 294.3 287 55.7
Manes.15G090100 Manihot esculenta HOM05D000070 ORTHO05D006683 2.8e-76 289.7 287 53.7
Sabra11G0127000 Salix brachista HOM05D000070 ORTHO05D006683 6.2e-76 288.5 287 53.7
Cfa020618 Carpinus fangiana HOM05D000070 ORTHO05D006683 5.3e-75 285.4 288 51.4
Haze_09387 Corylus avellana HOM05D000070 ORTHO05D006683 6.9e-75 285.0 291 50.5
Atru.chr2.2387 Acer truncatum HOM05D000070 ORTHO05D006683 9.9e-74 281.2 287 53.0
Glyma.13G273300 Glycine max HOM05D000070 ORTHO05D006683 6.4e-73 278.5 284 50.7
Glyma.12G227000 Glycine max HOM05D000070 ORTHO05D006683 1.1e-72 277.7 284 50.0
Phvul.005G069600 Phaseolus vulgaris HOM05D000070 ORTHO05D006683 1.4e-72 277.3 284 48.6
Gohir.D01G047300 Gossypium hirsutum HOM05D000070 ORTHO05D006683 1.9e-72 276.9 289 50.2
Gorai.002G066800 Gossypium raimondii HOM05D000070 ORTHO05D006683 1.9e-72 276.9 289 50.2
Gohir.A01G060800 Gossypium hirsutum HOM05D000070 ORTHO05D006683 2.4e-72 276.6 289 49.8
CiPaw.11G166700 Carya illinoinensis HOM05D000070 ORTHO05D006683 7.1e-72 275.0 288 51.0
Lalb_Chr25g0286211 Lupinus albus HOM05D000070 ORTHO05D006683 7.1e-72 275.0 287 50.5
VMungo1080G0328 Vigna mungo HOM05D000070 ORTHO05D006683 9.3e-72 274.6 309 46.9
Thecc.07G098900 Theobroma cacao HOM05D000070 ORTHO05D006683 2.1e-71 273.5 289 49.8
Ciclev10007229m.g Citrus clementina HOM05D000070 ORTHO05D006683 1.3e-70 270.8 288 50.7
TPR.G7945 Trifolium pratense HOM05D000070 ORTHO05D006683 1.8e-70 270.4 285 50.5
Duzib170G1082 Durio zibethinus HOM05D000070 ORTHO05D006683 3.0e-70 269.6 286 50.0
MD11G1256000 Malus domestica HOM05D000070 ORTHO05D006683 3.0e-70 269.6 287 49.8
Dinv20211 Davidia involucrata HOM05D000070 ORTHO05D006683 6.7e-70 268.5 287 50.2
RcHm_v2.0_Chr5g0032311 Rosa chinensis HOM05D000070 ORTHO05D006683 6.7e-70 268.5 287 49.8
FAN21G0502 Fragaria x ananassa HOM05D000070 ORTHO05D006683 1.5e-69 267.3 287 48.8
Psat5g241520 Pisum sativum HOM05D000070 ORTHO05D006683 2.5e-69 266.5 286 49.3
Ca_03533_v3 Cicer arietinum L. HOM05D000070 ORTHO05D006683 5.6e-69 265.4 285 48.8
FvH4_3g19240 Fragaria vesca HOM05D000070 ORTHO05D006683 7.4e-69 265.0 287 48.8
FAN11G2237 Fragaria x ananassa HOM05D000070 ORTHO05D006683 9.6e-69 264.6 287 48.4
FAN25G1528 Fragaria x ananassa HOM05D000070 ORTHO05D006683 9.6e-69 264.6 287 48.1
TWI38G2035 Tripterygium wilfordii HOM05D000070 ORTHO05D006683 1.3e-68 264.2 287 48.1
Duzib213G1081 Durio zibethinus HOM05D000070 ORTHO05D006683 1.6e-68 263.8 289 49.5
QL08p023642 Quercus lobata HOM05D000070 ORTHO05D006683 2.1e-68 263.5 289 49.8
FAN16G3451 Fragaria x ananassa HOM05D000070 ORTHO05D006683 1.8e-67 260.4 287 47.4
THA.LOC104810458 Tarenaya hassleriana HOM05D000070 ORTHO05D006683 4.0e-67 259.2 291 49.8
Lalb_Chr20g0109491 Lupinus albus HOM05D000070 ORTHO05D006683 6.9e-67 258.5 286 47.6
Gohir.D08G032300 Gossypium hirsutum HOM05D000070 ORTHO05D006683 1.2e-66 257.7 287 47.4
Gorai.004G029700 Gossypium raimondii HOM05D000070 ORTHO05D006683 1.2e-66 257.7 287 47.7
CANSAT35G1857 Cannabis sativa HOM05D000070 ORTHO05D006683 2.6e-66 256.5 290 47.9
Medtr2g078630 Medicago truncatula HOM05D000070 ORTHO05D006683 4.5e-66 255.8 292 47.3
Actinidia35238 Actinidia chinensis HOM05D000070 ORTHO05D006683 7.6e-66 255.0 289 48.8
Lj3g0013945 Lotus japonicus HOM05D000070 ORTHO05D006683 1.0e-65 254.6 282 47.9
Hma1.2p1_0416F.1_g148460 Hydrangea macrophylla HOM05D000070 ORTHO05D006683 2.2e-65 253.4 272 48.9
PGR083G0044 Punica granatum HOM05D000070 ORTHO05D006683 3.8e-65 252.7 283 48.8
vmacro09518 Vaccinium macrocarpon HOM05D000070 ORTHO05D006683 8.4e-65 251.5 290 47.6
arahy.Tifrunner.gnm1.ann1.48N9B9 Arachis hypogaea HOM05D000070 ORTHO05D006683 1.1e-64 251.1 285 47.4
MELO3C019399.2 Cucumis melo HOM05D000070 ORTHO05D006683 2.7e-63 246.5 299 48.5
Nn1g06393 Nelumbo nucifera HOM05D000070 ORTHO05D006683 2.7e-63 246.5 324 44.1
Eucgr.F01177 Eucalyptus grandis HOM05D000070 ORTHO05D006683 7.9e-63 245.0 285 44.6
Aa31LG8G2340 Aethionema arabicum HOM05D000070 ORTHO05D006683 1.0e-62 244.6 287 47.4
CsaV3_3G019540 Cucumis sativus L. HOM05D000070 ORTHO05D006683 2.3e-62 243.4 300 48.7
Sed0024008 Sechium edule HOM05D000070 ORTHO05D006683 1.3e-60 237.7 287 48.4
ECA240G2408 Erigeron canadensis HOM05D000070 ORTHO05D006683 1.6e-60 237.3 287 43.9
EL10Ac4g08256 Beta vulgaris HOM05D000070 ORTHO05D006683 3.7e-60 236.1 287 45.3
Sp3g13330 Schrenkiella parvula HOM05D000070 ORTHO05D006683 3.7e-60 236.1 311 45.3
CSS0012964 Camellia sinensis var. sinensis HOM05D000070 ORTHO05D006683 4.8e-60 235.7 259 49.4
ClCG05G009240 Citrullus lanatus HOM05D000070 ORTHO05D006683 4.8e-60 235.7 299 47.2
PGSC0003DMG400012401 Solanum tuberosum HOM05D000070 ORTHO05D006683 6.2e-60 235.3 282 45.0
Sc07g0002540 Simmondsia chinensis HOM05D000070 ORTHO05D006683 2.4e-59 233.4 281 45.2
Solyc07g062770.2 Solanum lycopersicum HOM05D000070 ORTHO05D006683 3.1e-59 233.0 282 44.7
Aqoxy1G02305 Aquilegia oxysepala HOM05D000070 ORTHO05D006683 4.1e-59 232.6 329 41.9
MSTRG.14209 Avicennia marina HOM05D000070 ORTHO05D006683 5.3e-59 232.3 274 47.4
Carub.0003s1477 Capsella rubella HOM05D000070 ORTHO05D006683 5.3e-59 232.3 290 46.9
TAR624G0583 Trochodendron aralioides HOM05D000070 ORTHO05D006683 6.9e-59 231.9 330 41.8
Thhalv10019880m.g Eutrema salsugineum HOM05D000070 ORTHO05D006683 2.6e-58 229.9 291 45.0
Lj1A837G48 Lonicera japonica HOM05D000070 ORTHO05D006683 2.6e-58 229.9 270 46.3
CARHR090100 Cardamine hirsuta HOM05D000070 ORTHO05D006683 4.5e-58 229.2 311 43.7
CAN.G162.29 Capsicum annuum HOM05D000070 ORTHO05D006683 7.6e-58 228.4 282 44.0
AL3G27480 Arabidopsis lyrata HOM05D000070 ORTHO05D006683 1.0e-57 228.0 291 45.0
HanXRQChr13g0391161 Helianthus annuus HOM05D000070 ORTHO05D006683 1.3e-57 227.6 273 45.4
AUR62019488 Chenopodium quinoa HOM05D000070 ORTHO05D006683 1.7e-57 227.3 289 46.0
Sopen07g030990 Solanum pennellii HOM05D000070 ORTHO05D006683 2.9e-57 226.5 282 43.6
A03p39160 Brassica napus HOM05D000070 ORTHO05D006683 3.8e-57 226.1 291 46.0
BraA03t13065Z Brassica rapa HOM05D000070 ORTHO05D006683 3.8e-57 226.1 291 46.0
Migut.H01962 Erythranthe guttata HOM05D000070 ORTHO05D006683 8.4e-57 224.9 274 45.6
Nitab4.5_0002019g0010 Nicotiana tabacum HOM05D000070 ORTHO05D006683 8.4e-57 224.9 285 42.1
Peaxi162Scf00069g01833 Petunia axillaris HOM05D000070 ORTHO05D006683 1.9e-56 223.8 281 42.7
SGA_v2.0_scaffold70G23693 Striga asiatica HOM05D000070 ORTHO05D006683 1.9e-56 223.8 301 44.9
AT3G15120 Arabidopsis thaliana HOM05D000070 ORTHO05D006683 9.3e-56 221.5 291 44.0
C03p47510 Brassica napus HOM05D000070 ORTHO05D006683 1.6e-55 220.7 291 45.7
BolC3t17015H Brassica oleracea HOM05D000070 ORTHO05D006683 1.6e-55 220.7 291 45.7
AUR62036148 Chenopodium quinoa HOM05D000070 ORTHO05D006683 1.6e-55 220.7 289 44.6
Nitab4.5_0000246g0030 Nicotiana tabacum HOM05D000070 ORTHO05D006683 3.5e-55 219.5 285 42.5
SalBow7G0119 Salvia bowleyana HOM05D000070 ORTHO05D006683 3.5e-55 219.5 281 44.5
Cc05_g11650 Coffea canephora HOM05D000070 ORTHO05D006683 7.9e-55 218.4 285 42.1
Ah.06g184760 Amaranthus hybridus HOM05D000070 ORTHO05D006683 1.3e-54 217.6 290 43.8
BcaC01g03897 Brassica carinata HOM05D000070 ORTHO05D006683 1.3e-54 217.6 279 45.9
PSO541G4369 Papaver somniferum HOM05D000070 ORTHO05D006683 1.5e-53 214.2 322 40.1
Cpa.g.sc80.3 Carica papaya HOM05D006724 ORTHO05D006683 4.3e-53 212.6 178 60.1
Lsat_1_v5_gn_9_98220 Lactuca sativa HOM05D000070 ORTHO05D006683 6.3e-52 208.8 274 43.8
HPP92_024566 Vanilla planifolia HOM05D000070 ORTHO05D006683 5.3e-51 205.7 312 37.5
CDE10G0809 Ceratophyllum demersum HOM05D000070 ORTHO05D006683 1.3e-49 201.1 302 42.1
Os01g0668300 Oryza sativa ssp. japonica HOM05D000070 ORTHO05D006683 1.1e-48 198.0 327 37.0
unitig_899.g15571 Utricularia gibba HOM05D000070 ORTHO05D006683 1.2e-47 194.5 274 41.6
Zm00001eb157300 Zea mays HOM05D000070 ORTHO05D006683 2.3e-46 190.3 311 37.6
CDE10G0784 Ceratophyllum demersum HOM05D000070 ORTHO05D006683 3.8e-41 172.9 163 54.0
ClCG04G000030 Citrullus lanatus HOM05D000070 ORTHO05D006683 9.4e-40 168.3 271 37.3
ATR0602G265 Amborella trichopoda HOM05D000070 ORTHO05D006683 2.7e-39 166.8 325 32.3
Prupe.4G173800 Prunus persica HOM05D000070 ORTHO05D006683 8.2e-36 155.2 190 45.3
SEGI_00098 Sequoiadendron giganteum HOM05D000070 ORTHO05D006683 1.2e-34 151.4 155 48.4
Dinv14946 Davidia involucrata HOM05D000070 ORTHO05D006683 5.0e-33 146.0 186 43.0
Sed0002493 Sechium edule HOM05D000070 ORTHO05D006683 2.5e-32 143.7 272 34.2
GSVIVG01014274001 Vitis vinifera HOM05D000070 ORTHO05D006683 1.0e-30 138.3 269 36.4
arahy.Tifrunner.gnm1.ann1.T5288F Arachis hypogaea HOM05D000070 ORTHO05D006683 7.4e-29 132.1 108 58.3
CsaV3_4G021830 Cucumis sativus L. HOM05D000070 ORTHO05D045030 2.3e-22 110.5 231 32.5
DCAR_013128 Daucus carota HOM05D000070 ORTHO05D006683 2.2e-20 104.0 270 32.2
Sed0011266 Sechium edule HOM05D000070 ORTHO05D045030 2.9e-17 93.6 174 36.8
Dinv14947 Davidia involucrata HOM05D000070 ORTHO05D006683 3.0e-14 83.6 58 69.0
AagrBONN_evm.TU.Sc2ySwM_368.1632 Anthoceros agrestis HOM05D000070 ORTHO05D006683 1.5e-13 81.3 215 28.4
Hma1.2p1_0416F.1_g148470 Hydrangea macrophylla HOM05D000070 ORTHO05D006683 7.7e-10 68.9 76 44.7
Mapoly0043s0039 Marchantia polymorpha HOM05D036583 ORTHO05D006683 7.7e-10 68.9 154 27.3
Pp3c8_5410 Physcomitrium patens HOM05D000070 ORTHO05D006683 1.3e-09 68.2 198 28.3
Psat5g030400 Pisum sativum HOM05D001137 ORTHO05D006400 1.0e-06 58.5 55 50.9
CDE10G0445 Ceratophyllum demersum HOM05D000070 ORTHO05D006683 4.0e-06 56.6 85 35.3
Psat0s3269g0080 Pisum sativum HOM05D000070 ORTHO05D006683 6.8e-06 55.8 55 47.3


User provided reference genes

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