Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI18657 Sapria himalayana HOM05D005966 ORTHO05D007584 6.9e-99 364.0 186 100.0
CANSAT11G2564 Cannabis sativa HOM05D005966 ORTHO05D007584 4.1e-43 178.7 136 68.4
Hma1.2p1_0018F.1_g012590 Hydrangea macrophylla HOM05D005966 ORTHO05D007584 4.1e-43 178.7 136 66.9
GSVIVG01015509001 Vitis vinifera HOM05D005966 ORTHO05D007584 1.6e-42 176.8 136 66.2
CiPaw.04G170200 Carya illinoinensis HOM05D005966 ORTHO05D007584 7.7e-42 174.5 136 66.2
Actinidia26399 Actinidia chinensis HOM05D005966 ORTHO05D007584 1.3e-41 173.7 136 64.7
vmacro06121 Vaccinium macrocarpon HOM05D005966 ORTHO05D007584 1.3e-41 173.7 136 62.5
vmacro06181 Vaccinium macrocarpon HOM05D005966 ORTHO05D007584 1.3e-41 173.7 136 62.5
QL02p087915 Quercus lobata HOM05D005966 ORTHO05D007584 2.2e-41 172.9 135 64.4
HanXRQChr04g0104201 Helianthus annuus HOM05D005966 ORTHO05D007584 5.0e-41 171.8 141 61.7
PGR102G3358 Punica granatum HOM05D005966 ORTHO05D007584 5.0e-41 171.8 136 65.4
Potri.015G057100 Populus trichocarpa HOM05D005966 ORTHO05D007584 6.5e-41 171.4 140 65.0
TAR636G0633 Trochodendron aralioides HOM05D005966 ORTHO05D007584 6.5e-41 171.4 136 64.0
Haze_25609 Corylus avellana HOM05D005966 ORTHO05D007584 8.5e-41 171.0 136 65.4
MD15G1175600 Malus domestica HOM05D005966 ORTHO05D007584 1.1e-40 170.6 136 64.7
Cfa003353 Carpinus fangiana HOM05D005966 ORTHO05D007584 1.5e-40 170.2 136 66.2
ECA236G0249 Erigeron canadensis HOM05D005966 ORTHO05D007584 1.5e-40 170.2 142 62.7
Actinidia07431 Actinidia chinensis HOM05D005966 ORTHO05D007584 2.5e-40 169.5 137 62.8
Sabra15G0082400 Salix brachista HOM05D005966 ORTHO05D007584 3.2e-40 169.1 140 64.3
Lsat_1_v5_gn_8_59020 Lactuca sativa HOM05D005966 ORTHO05D007584 4.2e-40 168.7 141 60.3
Nn2g12002 Nelumbo nucifera HOM05D005966 ORTHO05D007584 5.5e-40 168.3 136 63.2
Prupe.7G240500 Prunus persica HOM05D005966 ORTHO05D007584 5.5e-40 168.3 136 64.7
MELO3C022187.2 Cucumis melo HOM05D005966 ORTHO05D007584 7.2e-40 167.9 136 64.0
Eucgr.C04186 Eucalyptus grandis HOM05D005966 ORTHO05D007584 7.2e-40 167.9 154 60.4
Aqoxy5G00491 Aquilegia oxysepala HOM05D005966 ORTHO05D007584 9.4e-40 167.5 136 62.5
CsaV3_5G040100 Cucumis sativus L. HOM05D005966 ORTHO05D007584 1.2e-39 167.2 136 62.5
Atru.chr7.1212 Acer truncatum HOM05D005966 ORTHO05D007584 1.6e-39 166.8 136 62.5
Ciclev10007689m.g Citrus clementina HOM05D005966 ORTHO05D007584 1.6e-39 166.8 137 62.8
Migut.E01544 Erythranthe guttata HOM05D005966 ORTHO05D007584 1.6e-39 166.8 140 64.3
arahy.Tifrunner.gnm1.ann1.QB31BF Arachis hypogaea HOM05D005966 ORTHO05D007584 2.7e-39 166.0 136 63.2
Gohir.A07G035000 Gossypium hirsutum HOM05D005966 ORTHO05D007584 2.7e-39 166.0 133 65.4
Sed0002176 Sechium edule HOM05D005966 ORTHO05D007584 2.7e-39 166.0 136 64.0
Dinv36541 Davidia involucrata HOM05D005966 ORTHO05D007584 3.6e-39 165.6 136 63.2
TPR.G10691 Trifolium pratense HOM05D005966 ORTHO05D007584 3.6e-39 165.6 136 64.0
ClCG08G000940 Citrullus lanatus HOM05D005966 ORTHO05D007584 6.1e-39 164.9 136 61.0
Phvul.003G161800 Phaseolus vulgaris HOM05D005966 ORTHO05D007584 6.1e-39 164.9 136 64.7
Ca_21691_v3 Cicer arietinum L. HOM05D005966 ORTHO05D007584 8.0e-39 164.5 137 63.5
Gorai.001G041100 Gossypium raimondii HOM05D005966 ORTHO05D007584 1.0e-38 164.1 133 63.9
DCAR_014873 Daucus carota HOM05D005966 ORTHO05D007584 1.8e-38 163.3 143 60.1
Duzib187G1826 Durio zibethinus HOM05D005966 ORTHO05D007584 1.8e-38 163.3 133 65.4
Aa31LG1G14440 Aethionema arabicum HOM05D005966 ORTHO05D007584 2.3e-38 162.9 136 62.5
Solyc12g006650.2 Solanum lycopersicum HOM05D005966 ORTHO05D007584 2.3e-38 162.9 140 62.9
Sopen12g002600 Solanum pennellii HOM05D005966 ORTHO05D007584 2.3e-38 162.9 140 62.9
Lj4g0014642 Lotus japonicus HOM05D005966 ORTHO05D007584 4.0e-38 162.2 136 63.2
VMungo1215G0752 Vigna mungo HOM05D005966 ORTHO05D007584 4.0e-38 162.2 136 64.0
Oeu018459.1 Olea europaea HOM05D005966 ORTHO05D007584 5.2e-38 161.8 141 61.0
MSTRG.14036 Avicennia marina HOM05D005966 ORTHO05D007584 6.7e-38 161.4 140 60.7
Psat4g039400 Pisum sativum HOM05D005966 ORTHO05D007584 6.7e-38 161.4 137 62.0
CAN.G377.10 Capsicum annuum HOM05D005966 ORTHO05D007584 8.8e-38 161.0 140 62.1
Hund26492 Selenicereus undatus HOM05D005966 ORTHO05D007584 8.8e-38 161.0 135 59.3
Glyma.17G117600 Glycine max HOM05D005966 ORTHO05D007584 1.2e-37 160.6 137 62.0
Medtr4g114100 Medicago truncatula HOM05D005966 ORTHO05D007584 1.2e-37 160.6 137 61.3
PGSC0003DMG400020667 Solanum tuberosum HOM05D005966 ORTHO05D007584 1.2e-37 160.6 140 62.1
Gohir.D07G039000 Gossypium hirsutum HOM05D005966 ORTHO05D007584 1.5e-37 160.2 133 63.2
CSS0033485 Camellia sinensis var. sinensis HOM05D005966 ORTHO05D007584 2.0e-37 159.8 143 58.7
FvH4_5g23630 Fragaria vesca HOM05D005966 ORTHO05D007584 2.0e-37 159.8 135 61.5
FAN08G0676 Fragaria x ananassa HOM05D005966 ORTHO05D007584 2.0e-37 159.8 135 61.5
FAN13G2896 Fragaria x ananassa HOM05D005966 ORTHO05D007584 2.0e-37 159.8 135 61.5
FAN18G1628 Fragaria x ananassa HOM05D005966 ORTHO05D007584 2.0e-37 159.8 135 61.5
FAN18G2691 Fragaria x ananassa HOM05D005966 ORTHO05D007584 2.0e-37 159.8 135 61.5
RcHm_v2.0_Chr7g0212931 Rosa chinensis HOM05D005966 ORTHO05D007584 2.6e-37 159.5 137 62.8
PSO170G3915 Papaver somniferum HOM05D005966 ORTHO05D007584 3.3e-37 159.1 136 58.1
PSO455G0207 Papaver somniferum HOM05D005966 ORTHO05D007584 3.3e-37 159.1 136 57.4
AL6G31730 Arabidopsis lyrata HOM05D005966 ORTHO05D007584 4.4e-37 158.7 136 62.5
Glyma.05G009700 Glycine max HOM05D005966 ORTHO05D007584 5.7e-37 158.3 136 61.8
Gorai.009G019100 Gossypium raimondii HOM05D005966 ORTHO05D007584 7.5e-37 157.9 134 64.2
Sp6g24230 Schrenkiella parvula HOM05D005966 ORTHO05D007584 7.5e-37 157.9 136 61.8
A03p09900 Brassica napus HOM05D005966 ORTHO05D007584 9.7e-37 157.5 136 58.8
BolC3t13620H Brassica oleracea HOM05D005966 ORTHO05D007584 9.7e-37 157.5 136 58.8
BraA03t10303Z Brassica rapa HOM05D005966 ORTHO05D007584 9.7e-37 157.5 136 58.8
arahy.Tifrunner.gnm1.ann1.Z0FLIL Arachis hypogaea HOM05D005966 ORTHO05D007584 1.3e-36 157.1 148 58.1
Carub.0006s1857 Capsella rubella HOM05D005966 ORTHO05D007584 1.3e-36 157.1 136 61.8
Nitab4.5_0007523g0010 Nicotiana tabacum HOM05D005966 ORTHO05D007584 1.3e-36 157.1 145 59.3
Oeu021589.1 Olea europaea HOM05D005966 ORTHO05D007584 2.2e-36 156.4 141 56.7
Thecc.09G123800 Theobroma cacao HOM05D005966 ORTHO05D007584 3.7e-36 155.6 136 63.2
AT5G20170 Arabidopsis thaliana HOM05D005966 ORTHO05D007584 4.8e-36 155.2 136 61.0
CARHR192650 Cardamine hirsuta HOM05D005966 ORTHO05D007584 4.8e-36 155.2 136 59.6
SGA_v2.0_scaffold163G38051 Striga asiatica HOM05D005966 ORTHO05D007584 8.3e-36 154.5 141 58.2
EL10Ac8g18623 Beta vulgaris HOM05D005966 ORTHO05D007584 1.1e-35 154.1 135 60.0
C03p11480 Brassica napus HOM05D005966 ORTHO05D007584 1.1e-35 154.1 136 58.1
Lalb_Chr07g0178861 Lupinus albus HOM05D005966 ORTHO05D007584 1.1e-35 154.1 133 62.4
Thhalv10012923m.g Eutrema salsugineum HOM05D005966 ORTHO05D007584 1.4e-35 153.7 136 59.6
Glyma.14G007400 Glycine max HOM05D005966 ORTHO05D007584 1.4e-35 153.7 136 59.6
Nitab4.5_0010819g0010 Nicotiana tabacum HOM05D005966 ORTHO05D007584 3.1e-35 152.5 148 56.8
Gohir.A05G017800 Gossypium hirsutum HOM05D005966 ORTHO05D007584 4.1e-35 152.1 134 62.7
Cc06_g08730 Coffea canephora HOM05D005966 ORTHO05D007584 5.3e-35 151.8 143 55.9
AUR62011094 Chenopodium quinoa HOM05D005966 ORTHO05D007584 2.0e-34 149.8 135 57.8
Peaxi162Scf00984g00027 Petunia axillaris HOM05D005966 ORTHO05D007584 2.7e-34 149.4 142 57.7
Ah.14g080180 Amaranthus hybridus HOM05D005966 ORTHO05D007584 3.5e-34 149.1 135 57.8
AUR62033484 Chenopodium quinoa HOM05D005966 ORTHO05D007584 4.5e-34 148.7 135 57.0
HPP92_009844 Vanilla planifolia HOM05D005966 ORTHO05D007584 1.0e-33 147.5 136 58.1
THA.LOC104799647 Tarenaya hassleriana HOM05D005966 ORTHO05D007584 1.1e-32 144.1 136 58.1
ATR1156G034 Amborella trichopoda HOM05D005966 ORTHO05D007584 2.5e-32 142.9 136 52.9
Lj7C631G5 Lonicera japonica HOM05D005966 ORTHO05D007584 3.4e-29 132.5 225 38.7
SalBow1G1471 Salvia bowleyana HOM05D005966 ORTHO05D007584 6.3e-28 128.3 219 38.8
Sc08g0006740 Simmondsia chinensis HOM05D005966 ORTHO05D007584 1.4e-27 127.1 110 59.1
Zm00001eb207940 Zea mays HOM05D005966 ORTHO05D007584 1.8e-27 126.7 132 47.0
Rhsim03G0247300 Rhododendron simsii HOM05D005966 ORTHO05D007584 7.0e-27 124.8 88 72.7
SEGI_37567 Sequoiadendron giganteum HOM05D005966 ORTHO05D007584 7.0e-27 124.8 135 49.6
Os12g0638600 Oryza sativa ssp. japonica HOM05D005966 ORTHO05D007584 2.7e-26 122.9 132 48.5
Pp3c3_25450 Physcomitrium patens HOM05D005966 ORTHO05D007584 7.2e-24 114.8 132 43.9
Aqoxy7G02129 Aquilegia oxysepala HOM05D005966 ORTHO05D007584 2.0e-21 106.7 158 44.3
Mapoly0010s0026 Marchantia polymorpha HOM05D005966 ORTHO05D007584 2.6e-21 106.3 134 44.8
Manes.06G049700 Manihot esculenta HOM05D005966 ORTHO05D007584 6.3e-20 101.7 136 46.3
Sabra15G0082900 Salix brachista HOM05D005966 ORTHO05D007584 6.3e-20 101.7 153 43.8
SMO200G0046 Selaginella moellendorffii HOM05D005966 ORTHO05D007584 1.4e-19 100.5 132 38.6
Gohir.D05G018700 Gossypium hirsutum HOM05D005966 ORTHO05D007584 2.1e-15 86.7 134 44.8
MD02G1034800 Malus domestica HOM05D005966 ORTHO05D007584 2.8e-15 86.3 117 46.2
Cpa.g.sc75.52 Carica papaya HOM05D005966 ORTHO05D007584 3.1e-14 82.8 70 60.0
CDE01G0041 Ceratophyllum demersum HOM05D005966 ORTHO05D007584 5.2e-14 82.0 56 69.6
COL.COLO4_05778 Corchorus olitorius HOM05D005966 ORTHO05D007584 2.0e-13 80.1 88 54.5
AagrBONN_evm.TU.Sc2ySwM_117.630 Anthoceros agrestis HOM05D005966 ORTHO05D007584 8.3e-12 74.7 132 34.8
CBR_g48370 Chara braunii HOM05D005966 ORTHO05D000048 2.4e-11 73.2 91 41.8
CDE11G0857 Ceratophyllum demersum HOM05D005966 ORTHO05D007584 1.5e-08 63.9 69 50.7


User provided reference genes

Program Settings