Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI18636 Sapria himalayana HOM05D003889 ORTHO05D004407 1.0e-207 726.5 368 100.0
Potri.018G036600 Populus trichocarpa HOM05D003889 ORTHO05D004407 9.2e-63 245.0 395 41.0
Manes.03G066340 Manihot esculenta HOM05D003889 ORTHO05D004407 1.9e-55 220.7 379 40.6
Ciclev10007228m.g Citrus clementina HOM05D003889 ORTHO05D004407 1.8e-50 204.1 398 36.7
Thecc.09G038600 Theobroma cacao HOM05D003889 ORTHO05D004407 2.2e-48 197.2 389 36.5
Atru.chr7.2295 Acer truncatum HOM05D003889 ORTHO05D004407 8.3e-48 195.3 397 35.8
CiPaw.07G208100 Carya illinoinensis HOM05D003889 ORTHO05D004407 3.2e-47 193.4 384 36.7
Haze_21830 Corylus avellana HOM05D003889 ORTHO05D004407 4.1e-47 193.0 390 35.1
QL12p026194 Quercus lobata HOM05D003889 ORTHO05D004407 5.4e-47 192.6 413 35.8
GSVIVG01035684001 Vitis vinifera HOM05D003889 ORTHO05D004407 1.7e-45 187.6 381 37.0
Prupe.1G453900 Prunus persica HOM05D003889 ORTHO05D004407 5.6e-44 182.6 382 34.3
Duzib150G0348 Durio zibethinus HOM05D003889 ORTHO05D004407 9.5e-44 181.8 389 34.7
Gohir.A13G185900 Gossypium hirsutum HOM05D003889 ORTHO05D004407 9.5e-44 181.8 387 34.9
Gorai.013G218600 Gossypium raimondii HOM05D003889 ORTHO05D004407 9.5e-44 181.8 389 33.9
TAR636G2332 Trochodendron aralioides HOM05D003889 ORTHO05D004407 9.5e-44 181.8 433 36.3
Lj7C708G10 Lonicera japonica HOM05D003889 ORTHO05D004407 1.2e-43 181.4 361 36.0
COL.COLO4_18706 Corchorus olitorius HOM05D003889 ORTHO05D004407 1.1e-42 178.3 386 33.7
Lalb_Chr24g0402621 Lupinus albus HOM05D003889 ORTHO05D004407 2.6e-41 173.7 376 34.0
FAN20G0810 Fragaria x ananassa HOM05D003889 ORTHO05D004407 9.9e-41 171.8 415 33.3
Dinv30246 Davidia involucrata HOM05D003889 ORTHO05D004407 1.3e-40 171.4 392 33.9
THA.LOC104818599 Tarenaya hassleriana HOM05D003889 ORTHO05D004407 1.3e-40 171.4 383 35.2
CSS0006872 Camellia sinensis var. sinensis HOM05D003889 ORTHO05D004407 4.9e-40 169.5 351 37.3
TWI34G0995 Tripterygium wilfordii HOM05D003889 ORTHO05D004407 1.4e-39 167.9 372 34.1
RcHm_v2.0_Chr6g0305641 Rosa chinensis HOM05D003889 ORTHO05D004407 3.2e-39 166.8 382 33.5
Cpa.g.sc78.93 Carica papaya HOM05D003889 ORTHO05D004407 5.4e-39 166.0 393 32.6
Nitab4.5_0008974g0010 Nicotiana tabacum HOM05D003889 ORTHO05D004407 7.1e-39 165.6 385 34.3
Lj1g0022555 Lotus japonicus HOM05D003889 ORTHO05D004407 2.7e-38 163.7 386 34.5
FvH4_2g36240 Fragaria vesca HOM05D003889 ORTHO05D004407 3.5e-38 163.3 388 33.5
Actinidia13307 Actinidia chinensis HOM05D003889 ORTHO05D004407 7.8e-38 162.2 396 32.8
Rhsim02G0183600 Rhododendron simsii HOM05D003889 ORTHO05D004407 7.8e-38 162.2 372 33.3
FAN15G2018 Fragaria x ananassa HOM05D003889 ORTHO05D004407 3.9e-37 159.8 386 33.4
Hund03446 Selenicereus undatus HOM05D003889 ORTHO05D004407 6.6e-37 159.1 388 33.2
ECA233G2562 Erigeron canadensis HOM05D003889 ORTHO05D004407 1.1e-36 158.3 369 34.4
FAN27G2633 Fragaria x ananassa HOM05D003889 ORTHO05D004407 1.9e-36 157.5 392 33.2
Glyma.14G140800 Glycine max HOM05D003889 ORTHO05D004407 2.5e-36 157.1 385 31.4
Nn8g39185 Nelumbo nucifera HOM05D003889 ORTHO05D004407 2.5e-36 157.1 422 32.0
MD08G1120000 Malus domestica HOM05D003889 ORTHO05D004407 3.3e-36 156.8 384 33.3
AL7G19040 Arabidopsis lyrata HOM05D003889 ORTHO05D004407 4.3e-36 156.4 381 33.6
Nitab4.5_0000250g0220 Nicotiana tabacum HOM05D003889 ORTHO05D004407 4.3e-36 156.4 388 32.2
A01p05650 Brassica napus HOM05D003889 ORTHO05D004407 1.2e-35 154.8 374 32.9
TPR.G12075 Trifolium pratense HOM05D003889 ORTHO05D004407 1.6e-35 154.5 368 29.9
Carub.0007s0783 Capsella rubella HOM05D003889 ORTHO05D004407 2.8e-35 153.7 362 33.1
Thhalv10024191m.g Eutrema salsugineum HOM05D003889 ORTHO05D004407 2.8e-35 153.7 286 37.4
PGR044G0516 Punica granatum HOM05D003889 ORTHO05D004407 2.8e-35 153.7 383 32.9
Sopen08g021990 Solanum pennellii HOM05D003889 ORTHO05D004407 2.8e-35 153.7 388 31.7
AT4G32700 Arabidopsis thaliana HOM05D003889 ORTHO05D004407 3.6e-35 153.3 382 33.0
A08p18050 Brassica napus HOM05D003889 ORTHO05D004407 6.2e-35 152.5 376 31.6
C01p06220 Brassica napus HOM05D003889 ORTHO05D004407 6.2e-35 152.5 374 32.6
Sp7g30460 Schrenkiella parvula HOM05D003889 ORTHO05D004407 8.1e-35 152.1 388 32.5
Solyc08g068110.1 Solanum lycopersicum HOM05D003889 ORTHO05D004407 8.1e-35 152.1 386 31.6
Aa31LG2G16920 Aethionema arabicum HOM05D003889 ORTHO05D004407 1.1e-34 151.8 412 29.9
Psat6g033880 Pisum sativum HOM05D003889 ORTHO05D004407 1.4e-34 151.4 364 29.7
BcaB03g12757 Brassica carinata HOM05D003889 ORTHO05D004407 2.4e-34 150.6 361 33.5
Ca_12818_v3 Cicer arietinum L. HOM05D003889 ORTHO05D004407 9.0e-34 148.7 369 30.6
HanXRQChr14g0435171 Helianthus annuus HOM05D003889 ORTHO05D004407 2.6e-33 147.1 258 38.8
MBI04_g19381_MAGBIO Magnolia biondii HOM05D003889 ORTHO05D004407 2.6e-33 147.1 405 31.9
BcaC09g52063 Brassica carinata HOM05D003889 ORTHO05D004407 3.4e-33 146.7 380 32.1
BraA08t33755Z Brassica rapa HOM05D003889 ORTHO05D004407 9.9e-33 145.2 387 31.8
CARHR240680 Cardamine hirsuta HOM05D003889 ORTHO05D004407 1.3e-32 144.8 384 33.1
Phvul.008G158500 Phaseolus vulgaris HOM05D003889 ORTHO05D004407 1.3e-32 144.8 379 30.3
BraA01t00535Z Brassica rapa HOM05D003889 ORTHO05D004407 1.7e-32 144.4 389 31.6
Oeu031571.1 Olea europaea HOM05D003889 ORTHO05D004407 2.2e-32 144.1 392 31.4
arahy.Tifrunner.gnm1.ann1.NKLE2F Arachis hypogaea HOM05D003889 ORTHO05D004407 1.1e-31 141.7 286 35.7
Medtr1g008600 Medicago truncatula HOM05D003889 ORTHO05D004407 5.4e-31 139.4 366 30.6
Oeu018088.1 Olea europaea HOM05D003889 ORTHO05D004407 5.4e-31 139.4 392 32.1
VMungo0647G0349 Vigna mungo HOM05D003889 ORTHO05D004407 5.4e-31 139.4 381 29.1
arahy.Tifrunner.gnm1.ann1.D2VLN9 Arachis hypogaea HOM05D003889 ORTHO05D004407 7.1e-31 139.0 289 34.3
CAN.G886.4 Capsicum annuum HOM05D003889 ORTHO05D004407 9.3e-31 138.7 412 29.1
Lsat_1_v5_gn_6_11181 Lactuca sativa HOM05D003889 ORTHO05D004407 2.1e-30 137.5 329 35.0
Peaxi162Scf00105g00416 Petunia axillaris HOM05D003889 ORTHO05D004407 2.1e-30 137.5 390 31.8
Cc08_g08480 Coffea canephora HOM05D003889 ORTHO05D004407 3.5e-30 136.7 393 28.8
EL10Ac2g04091 Beta vulgaris HOM05D003889 ORTHO05D004407 4.6e-30 136.3 317 33.4
AUR62009357 Chenopodium quinoa HOM05D003889 ORTHO05D004407 4.6e-30 136.3 305 34.4
Sed0021057 Sechium edule HOM05D003889 ORTHO05D004407 7.8e-30 135.6 387 30.7
PGSC0003DMG400014493 Solanum tuberosum HOM05D003889 ORTHO05D004407 7.8e-30 135.6 401 30.2
C03p87160 Brassica napus HOM05D003889 ORTHO05D004407 2.3e-29 134.0 374 30.5
SGA_v2.0_scaffold243G44298 Striga asiatica HOM05D003889 ORTHO05D004407 2.3e-29 134.0 370 28.6
AUR62023039 Chenopodium quinoa HOM05D003889 ORTHO05D004407 6.6e-29 132.5 400 31.2
PSO782G2669 Papaver somniferum HOM05D003889 ORTHO05D004407 2.5e-28 130.6 406 30.3
BolC3t21018H Brassica oleracea HOM05D003889 ORTHO05D004407 5.6e-28 129.4 383 30.5
DCAR_000737 Daucus carota HOM05D003889 ORTHO05D004407 5.6e-28 129.4 367 30.0
Sc23g0005860 Simmondsia chinensis HOM05D003889 ORTHO05D004407 5.6e-28 129.4 390 30.0
ClCG08G012400 Citrullus lanatus HOM05D003889 ORTHO05D004407 7.3e-28 129.0 391 29.4
PSO198G0085 Papaver somniferum HOM05D003889 ORTHO05D004407 9.6e-28 128.6 406 30.0
Migut.A00236 Erythranthe guttata HOM05D003889 ORTHO05D004407 1.3e-27 128.3 397 30.7
Aqoxy7G01675 Aquilegia oxysepala HOM05D003889 ORTHO05D004407 1.6e-27 127.9 438 29.5
CsaV3_2G031090 Cucumis sativus L. HOM05D003889 ORTHO05D004407 3.1e-26 123.6 388 30.2
MELO3C011159.2 Cucumis melo HOM05D003889 ORTHO05D004407 5.8e-25 119.4 387 29.2
Ah.10g035410 Amaranthus hybridus HOM05D003889 ORTHO05D004407 1.7e-24 117.9 393 29.8
Eucgr.C02886 Eucalyptus grandis HOM05D003889 ORTHO05D004407 5.1e-21 106.3 305 29.2
CSS0033742 Camellia sinensis var. sinensis HOM05D003889 ORTHO05D004407 1.6e-19 101.3 182 40.1
ATR0916G007 Amborella trichopoda HOM05D003889 ORTHO05D004407 2.1e-19 100.9 425 27.1
SalBow4G0524 Salvia bowleyana HOM05D003889 ORTHO05D004407 4.5e-17 93.2 360 30.3
Haze_13402 Corylus avellana HOM05D003889 ORTHO05D004407 1.7e-16 91.3 62 62.9
CDE05G0389 Ceratophyllum demersum HOM05D003889 ORTHO05D004407 3.5e-14 83.6 161 34.8
Os12g0291000 Oryza sativa ssp. japonica HOM05D003889 ORTHO05D004407 6.0e-14 82.8 289 27.3
Zm00001eb409880 Zea mays HOM05D003889 ORTHO05D004407 3.9e-13 80.1 158 32.9
HPP92_002909 Vanilla planifolia HOM05D003889 ORTHO05D004407 2.1e-11 74.3 65 53.8
Lsat_1_v5_gn_3_5760 Lactuca sativa HOM05D003889 ORTHO05D004407 1.2e-09 68.6 81 42.0
Pp3c5_12930 Physcomitrium patens HOM05D003889 ORTHO05D004407 4.9e-08 63.2 45 53.3
Mapoly0097s0045 Marchantia polymorpha HOM05D003889 ORTHO05D004407 1.4e-07 61.6 58 46.6
AagrBONN_evm.TU.Sc2ySwM_117.2429 Anthoceros agrestis HOM05D003889 ORTHO05D004407 4.6e-06 56.6 135 27.4


User provided reference genes

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