Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI18368 Sapria himalayana HOM05D003467 ORTHO05D004220 2.7e-61 238.4 115 100.0
SHI36997 Sapria himalayana HOM05D003467 ORTHO05D004220 1.1e-09 67.0 48 70.8
SHI53641 Sapria himalayana HOM05D003467 ORTHO05D004220 2.4e-09 65.9 52 65.4
CANSAT16G0031 Cannabis sativa HOM05D003467 ORTHO05D004220 5.3e-09 64.7 52 65.4
Nn1g10002 Nelumbo nucifera HOM05D003467 ORTHO05D004220 5.3e-09 64.7 52 65.4
SHI37866 Sapria himalayana HOM05D003467 ORTHO05D004220 9.1e-09 63.9 48 68.8
SHI38985 Sapria himalayana HOM05D003467 ORTHO05D004220 1.2e-08 63.5 53 64.2
Aa31csc239G20 Aethionema arabicum HOM05D003467 ORTHO05D004220 2.0e-08 62.8 57 63.2
AL3G44370 Arabidopsis lyrata HOM05D003467 ORTHO05D004220 2.0e-08 62.8 57 63.2
AT2G07715 Arabidopsis thaliana HOM05D003467 ORTHO05D004220 2.0e-08 62.8 57 63.2
ATMG00560 Arabidopsis thaliana HOM05D003467 ORTHO05D004220 2.0e-08 62.8 57 63.2
CARHR282930 Cardamine hirsuta HOM05D003467 ORTHO05D004220 2.6e-08 62.4 57 61.4
SHI37879 Sapria himalayana HOM05D003467 ORTHO05D004220 2.6e-08 62.4 48 66.7
SHI37961 Sapria himalayana HOM05D003467 ORTHO05D004220 2.6e-08 62.4 48 66.7
SHI38047 Sapria himalayana HOM05D003467 ORTHO05D004220 2.6e-08 62.4 48 66.7
SHI38192 Sapria himalayana HOM05D003467 ORTHO05D004220 2.6e-08 62.4 48 66.7
SHI40343 Sapria himalayana HOM05D003467 ORTHO05D004220 2.6e-08 62.4 48 66.7
SHI42055 Sapria himalayana HOM05D003467 ORTHO05D004220 2.6e-08 62.4 48 66.7
SHI51351 Sapria himalayana HOM05D003467 ORTHO05D004220 2.6e-08 62.4 48 66.7
SHI52074 Sapria himalayana HOM05D003467 ORTHO05D004220 2.6e-08 62.4 48 66.7
SHI52601 Sapria himalayana HOM05D003467 ORTHO05D004220 2.6e-08 62.4 48 66.7
SHI52974 Sapria himalayana HOM05D003467 ORTHO05D004220 2.6e-08 62.4 48 66.7
SHI53305 Sapria himalayana HOM05D003467 ORTHO05D004220 2.6e-08 62.4 48 66.7
SHI47986 Sapria himalayana HOM05D003467 ORTHO05D004220 3.4e-08 62.0 49 65.3
Lj2C1229G12 Lonicera japonica HOM05D003467 ORTHO05D004220 4.5e-08 61.6 49 65.3
SHI37886 Sapria himalayana HOM05D003467 ORTHO05D004220 5.9e-08 61.2 45 68.9
SHI52008 Sapria himalayana HOM05D003467 ORTHO05D004220 5.9e-08 61.2 53 62.3
ATR0661G353 Amborella trichopoda HOM05D003467 ORTHO05D004220 7.7e-08 60.8 49 63.3
SHI38317 Sapria himalayana HOM05D003467 ORTHO05D004220 7.7e-08 60.8 48 66.7
BcaC08g43711 Brassica carinata HOM05D003467 ORTHO05D004220 1.0e-07 60.5 57 61.4
BNapus_Darmor_BZH_scaffold_234p00200 Brassica napus HOM05D003467 ORTHO05D004220 1.0e-07 60.5 57 61.4
BolSC28t60347H Brassica oleracea HOM05D003467 ORTHO05D004220 1.0e-07 60.5 57 61.4
BraSC48t46273Z Brassica rapa HOM05D003467 ORTHO05D004220 1.0e-07 60.5 57 61.4
Thhalv10013769m.g Eutrema salsugineum HOM05D003467 ORTHO05D004220 1.0e-07 60.5 57 61.4
SHI37556 Sapria himalayana HOM05D003467 ORTHO05D004220 1.0e-07 60.5 48 64.6
SHI50250 Sapria himalayana HOM05D003467 ORTHO05D004220 1.0e-07 60.5 48 64.6
Sp3g25530 Schrenkiella parvula HOM05D003467 ORTHO05D004220 1.0e-07 60.5 57 61.4
Sed0002506 Sechium edule HOM05D003467 ORTHO05D004220 1.0e-07 60.5 57 59.6
Sed0025530 Sechium edule HOM05D003467 ORTHO05D004220 1.0e-07 60.5 57 59.6
Sed0026029 Sechium edule HOM05D003467 ORTHO05D004220 1.0e-07 60.5 57 59.6
MBI16_g09480_MAGBIO Magnolia biondii HOM05D003467 ORTHO05D004220 2.2e-07 59.3 52 61.5
SHI36699 Sapria himalayana HOM05D003467 ORTHO05D004220 2.2e-07 59.3 45 68.9
CDE02G2877 Ceratophyllum demersum HOM05D003467 ORTHO05D004220 2.9e-07 58.9 48 64.6
SHI44577 Sapria himalayana HOM05D003467 ORTHO05D004220 2.9e-07 58.9 48 62.5
ClCG11G007180 Citrullus lanatus HOM05D003467 ORTHO05D004220 5.0e-07 58.2 53 60.4
Dinv06674 Davidia involucrata HOM05D003467 ORTHO05D004220 5.0e-07 58.2 49 63.3
SHI34611 Sapria himalayana HOM05D003467 ORTHO05D004220 5.0e-07 58.2 45 66.7
SHI38786 Sapria himalayana HOM05D003467 ORTHO05D004220 5.0e-07 58.2 48 64.6
CARHR288290 Cardamine hirsuta HOM05D003467 ORTHO05D004220 6.5e-07 57.8 46 65.2
SHI23234 Sapria himalayana HOM05D276803 ORTHO05D370076 6.5e-07 57.8 50 56.0
SGA_v2.0_scaffold255G45505 Striga asiatica HOM05D003467 ORTHO05D004220 8.5e-07 57.4 57 56.1
Actinidia34926 Actinidia chinensis HOM05D003467 ORTHO05D004220 1.4e-06 56.6 45 64.4
Rhsim07G0055600 Rhododendron simsii HOM05D003467 ORTHO05D004220 1.4e-06 56.6 51 62.7
BolC4t23495H Brassica oleracea HOM05D003467 ORTHO05D004220 1.9e-06 56.2 57 57.9
SHI48358 Sapria himalayana HOM05D003467 ORTHO05D004220 1.9e-06 56.2 46 67.4
SHI52927 Sapria himalayana HOM05D003467 ORTHO05D004220 1.9e-06 56.2 49 61.2
SabraMtG0006300 Salix brachista HOM05D003467 ORTHO05D004220 2.5e-06 55.8 49 61.2
SHI37209 Sapria himalayana HOM05D003467 ORTHO05D004220 4.2e-06 55.1 48 62.5


User provided reference genes

Program Settings