Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI18137 Sapria himalayana HOM05D002009 ORTHO05D006831 0.0e+00 1357.4 680 100.0
Manes.09G167800 Manihot esculenta HOM05D002009 ORTHO05D006831 3.2e-93 347.1 598 39.3
Potri.013G022200 Populus trichocarpa HOM05D002009 ORTHO05D006831 2.7e-92 344.0 616 40.1
Sabra13G0024400 Salix brachista HOM05D002009 ORTHO05D006831 1.2e-87 328.6 622 37.5
TAR633G0909 Trochodendron aralioides HOM05D002009 ORTHO05D006831 1.3e-83 315.1 659 36.6
Gohir.A08G210100 Gossypium hirsutum HOM05D002009 ORTHO05D006831 1.7e-83 314.7 630 36.8
Thecc.05G301300 Theobroma cacao HOM05D002009 ORTHO05D006831 1.1e-82 312.0 638 37.6
Gorai.004G241000 Gossypium raimondii HOM05D002009 ORTHO05D006831 2.5e-82 310.8 637 36.9
QL03p007353 Quercus lobata HOM05D002009 ORTHO05D006831 4.3e-82 310.1 652 36.2
QL03p007751 Quercus lobata HOM05D002009 ORTHO05D006831 4.3e-82 310.1 652 36.2
Atru.chr2.372 Acer truncatum HOM05D002009 ORTHO05D006831 1.2e-79 302.0 605 36.5
Dinv40301 Davidia involucrata HOM05D002009 ORTHO05D006831 2.0e-79 301.2 663 37.0
CiPaw.07G018700 Carya illinoinensis HOM05D002009 ORTHO05D006831 4.2e-77 293.5 648 35.3
Lju1040C0G1 Lonicera japonica HOM05D002009 ORTHO05D006831 2.1e-76 291.2 620 36.5
Lj9C89G5 Lonicera japonica HOM05D002009 ORTHO05D006831 1.7e-75 288.1 620 37.3
TWI36G1702 Tripterygium wilfordii HOM05D002009 ORTHO05D006831 1.7e-75 288.1 625 35.7
CSS0012384 Camellia sinensis var. sinensis HOM05D002009 ORTHO05D006831 5.1e-75 286.6 639 34.9
MD12G1217900 Malus domestica HOM05D002009 ORTHO05D006831 5.6e-74 283.1 657 35.0
CSS0006817 Camellia sinensis var. sinensis HOM05D002009 ORTHO05D006831 9.6e-74 282.3 639 34.6
Prupe.6G324000 Prunus persica HOM05D002009 ORTHO05D006831 3.6e-73 280.4 623 36.4
GSVIVG01000087001 Vitis vinifera HOM05D002009 ORTHO05D006831 2.4e-72 277.7 582 35.4
Ciclev10003639m.g Citrus clementina HOM05D002009 ORTHO05D006831 3.1e-72 277.3 630 35.6
Thhalv10017996m.g Eutrema salsugineum HOM05D002009 ORTHO05D006831 9.0e-72 275.8 617 35.7
Haze_04184 Corylus avellana HOM05D002009 ORTHO05D006831 1.2e-71 275.4 663 35.7
Rhsim12G0060600 Rhododendron simsii HOM05D002009 ORTHO05D006831 2.6e-71 274.2 588 37.2
BolC6t38955H Brassica oleracea HOM05D002009 ORTHO05D006831 6.4e-70 269.6 594 36.5
Aa31LG2G11690 Aethionema arabicum HOM05D000208 ORTHO05D006831 1.1e-69 268.9 599 34.7
C06p38660 Brassica napus HOM05D002009 ORTHO05D006831 1.1e-69 268.9 597 36.2
A07p32520 Brassica napus HOM05D002009 ORTHO05D006831 2.4e-69 267.7 600 36.2
BraA07t30876Z Brassica rapa HOM05D002009 ORTHO05D006831 5.4e-69 266.5 607 35.6
Solyc01g099220.3 Solanum lycopersicum HOM05D002009 ORTHO05D006831 2.1e-68 264.6 627 35.6
Sopen01g042770 Solanum pennellii HOM05D002009 ORTHO05D006831 3.5e-68 263.8 627 35.7
THA.LOC104823729 Tarenaya hassleriana HOM05D002009 ORTHO05D006831 3.5e-68 263.8 617 34.5
Carub.0002s1383 Capsella rubella HOM05D002009 ORTHO05D006831 1.8e-67 261.5 613 34.7
Glyma.03G237200 Glycine max HOM05D002009 ORTHO05D006831 1.8e-67 261.5 650 34.0
BcaB03g15362 Brassica carinata HOM05D002009 ORTHO05D006831 3.9e-67 260.4 584 35.1
CARHR060080 Cardamine hirsuta HOM05D002009 ORTHO05D006831 1.5e-66 258.5 609 34.2
AL2G26100 Arabidopsis lyrata HOM05D002009 ORTHO05D006831 2.5e-66 257.7 614 33.9
FvH4_6g06120 Fragaria vesca HOM05D002009 ORTHO05D006831 2.5e-66 257.7 643 34.7
Sc09g0003130 Simmondsia chinensis HOM05D002009 ORTHO05D006831 7.4e-66 256.1 652 33.7
arahy.Tifrunner.gnm1.ann1.UY60S3 Arachis hypogaea HOM05D002009 ORTHO05D006831 1.3e-65 255.4 628 32.6
CAN.G1034.31 Capsicum annuum HOM05D002009 ORTHO05D006831 2.8e-65 254.2 643 34.7
AT1G67500 Arabidopsis thaliana HOM05D002009 ORTHO05D006831 3.7e-65 253.8 619 34.4
Sp5g22500 Schrenkiella parvula HOM05D002009 ORTHO05D006831 3.7e-65 253.8 603 33.3
TPR.G33207 Trifolium pratense HOM05D002009 ORTHO05D006831 6.2e-65 253.1 609 34.5
arahy.Tifrunner.gnm1.ann1.V7WSHY Arachis hypogaea HOM05D002009 ORTHO05D006831 1.4e-64 251.9 633 33.2
FAN14G2713 Fragaria x ananassa HOM05D002009 ORTHO05D006831 1.8e-64 251.5 643 34.1
RcHm_v2.0_Chr3g0455131 Rosa chinensis HOM05D002009 ORTHO05D006831 3.1e-64 250.8 645 34.0
Lalb_Chr18g0045671 Lupinus albus HOM05D002009 ORTHO05D006831 6.9e-64 249.6 612 33.3
Psat0s2197g0080 Pisum sativum HOM05D002009 ORTHO05D006831 1.2e-63 248.8 610 34.1
Sed0001711 Sechium edule HOM05D002009 ORTHO05D006831 4.9e-62 243.4 642 33.2
PSO210G3028 Papaver somniferum HOM05D002009 ORTHO05D006831 6.4e-62 243.0 646 31.3
Ca_05812_v3 Cicer arietinum L. HOM05D002009 ORTHO05D006831 1.1e-61 242.3 663 33.9
Peaxi162Scf00037g00637 Petunia axillaris HOM05D002009 ORTHO05D006831 4.2e-61 240.4 633 34.0
Cpa.g.sc48.67 Carica papaya HOM05D002009 ORTHO05D006831 5.5e-61 240.0 623 31.3
Phvul.006G091300 Phaseolus vulgaris HOM05D002009 ORTHO05D006831 9.3e-61 239.2 648 31.3
vmacro04986 Vaccinium macrocarpon HOM05D002009 ORTHO05D006831 1.2e-60 238.8 599 35.1
Cc02_g33310 Coffea canephora HOM05D002009 ORTHO05D006831 1.6e-60 238.4 636 33.5
HanXRQChr15g0469941 Helianthus annuus HOM05D002009 ORTHO05D006831 3.5e-60 237.3 588 33.8
FAN09G2733 Fragaria x ananassa HOM05D002009 ORTHO05D006831 1.3e-59 235.3 643 33.0
Migut.N02062 Erythranthe guttata HOM05D002009 ORTHO05D006831 3.0e-59 234.2 597 33.2
Aqoxy2G03070 Aquilegia oxysepala HOM05D002009 ORTHO05D006831 1.5e-58 231.9 624 31.6
ECA236G3568 Erigeron canadensis HOM05D002009 ORTHO05D006831 1.9e-58 231.5 646 32.5
CANSAT54G3017 Cannabis sativa HOM05D002009 ORTHO05D006831 5.6e-58 229.9 661 32.2
CsaV3_2G006490 Cucumis sativus L. HOM05D002009 ORTHO05D006831 3.7e-57 227.3 608 32.9
Actinidia23644 Actinidia chinensis HOM05D002009 ORTHO05D006831 4.8e-57 226.9 597 33.0
Nn3g21358 Nelumbo nucifera HOM05D002009 ORTHO05D006831 6.9e-56 223.0 613 31.5
MSTRG.27991 Avicennia marina HOM05D002009 ORTHO05D006831 5.8e-55 219.9 678 31.6
ATR0706G256 Amborella trichopoda HOM05D002009 ORTHO05D006831 1.3e-54 218.8 602 31.2
Hund07076 Selenicereus undatus HOM05D002009 ORTHO05D006831 1.3e-54 218.8 597 31.7
ClCG02G015610 Citrullus lanatus HOM05D002009 ORTHO05D006831 2.9e-54 217.6 658 31.2
AUR62005157 Chenopodium quinoa HOM05D002009 ORTHO05D006831 3.8e-54 217.2 447 36.2
AUR62000811 Chenopodium quinoa HOM05D002009 ORTHO05D006831 6.5e-54 216.5 447 36.9
Ah.04g160310 Amaranthus hybridus HOM05D002009 ORTHO05D006831 1.1e-53 215.7 641 32.6
Medtr7g113380 Medicago truncatula HOM05D002009 ORTHO05D006831 1.4e-53 215.3 605 30.9
SGA_v2.0_scaffold80G25788 Striga asiatica HOM05D002009 ORTHO05D006831 7.1e-53 213.0 598 31.9
EL10Ac4g09369 Beta vulgaris HOM05D002009 ORTHO05D006831 1.0e-51 209.1 610 31.3
Oeu002661.1 Olea europaea HOM05D002009 ORTHO05D006831 4.3e-50 203.8 502 33.3
DCAR_001814 Daucus carota HOM05D002009 ORTHO05D006831 1.3e-49 202.2 633 30.8
Lsat_1_v5_gn_9_86800 Lactuca sativa HOM05D002009 ORTHO05D006831 1.4e-48 198.7 586 29.9
Eucgr.B01945 Eucalyptus grandis HOM05D002009 ORTHO05D006831 2.4e-48 198.0 621 30.6
PSO170G1195 Papaver somniferum HOM05D002009 ORTHO05D006831 5.3e-48 196.8 644 29.3
unitig_0.g2310 Utricularia gibba HOM05D002009 ORTHO05D006831 4.5e-47 193.7 626 29.4
Lj1g0026508 Lotus japonicus HOM05D002009 ORTHO05D006831 6.3e-41 173.3 555 30.5
COL.COLO4_13444 Corchorus olitorius HOM05D002009 ORTHO05D006831 1.1e-40 172.6 487 32.0
HPP92_001324 Vanilla planifolia HOM05D002009 ORTHO05D006831 2.5e-37 161.4 620 28.1
Zm00001eb330170 Zea mays HOM05D002009 ORTHO05D006831 6.1e-36 156.8 606 28.4
QL03p054350 Quercus lobata HOM05D003219 ORTHO05D005190 7.4e-34 149.8 224 39.3
Gohir.D08G227001 Gossypium hirsutum HOM05D002009 ORTHO05D006831 4.5e-31 140.6 438 31.5
SEGI_14509 Sequoiadendron giganteum HOM05D002009 ORTHO05D006831 1.2e-28 132.5 732 25.7
Hma1.2p1_1077F.1_g254700 Hydrangea macrophylla HOM05D002009 ORTHO05D006831 2.3e-27 128.3 284 35.6
FAN05G0625 Fragaria x ananassa HOM05D002009 ORTHO05D006831 7.4e-26 123.2 178 40.4
MD05G1053400 Malus domestica HOM05D002009 ORTHO05D006831 2.8e-25 121.3 159 44.0
Rhsim07G0183800 Rhododendron simsii HOM05D002009 ORTHO05D006831 8.2e-25 119.8 225 35.6
MD05G1053500 Malus domestica HOM05D005153 ORTHO05D006817 2.6e-23 114.8 354 31.4
Migut.N02070 Erythranthe guttata HOM05D002009 ORTHO05D006831 1.5e-21 109.0 414 29.0
AagrBONN_evm.TU.Sc2ySwM_362.1967 Anthoceros agrestis HOM05D002009 ORTHO05D006831 2.8e-17 94.7 534 25.5
CBR_g26314 Chara braunii HOM05D002009 ORTHO05D006831 1.1e-16 92.8 231 32.0
SMO146G0384 Selaginella moellendorffii HOM05D002009 ORTHO05D006831 5.3e-16 90.5 301 28.6
Pp3c2_33440 Physcomitrium patens HOM05D002009 ORTHO05D006831 3.5e-15 87.8 468 24.4
MELO3C004237.2 Cucumis melo HOM05D002009 ORTHO05D006831 5.9e-15 87.0 257 32.3
Cfa024282 Carpinus fangiana HOM05D002009 ORTHO05D006831 7.5e-10 70.1 223 26.0
PRCOL_00003841 Prasinoderma coloniale HOM05D002009 ORTHO05D006831 3.7e-09 67.8 220 26.4
Mapoly0082s0049 Marchantia polymorpha HOM05D002009 ORTHO05D006831 5.9e-07 60.5 49 44.9
Rhsim06G0107500 Rhododendron simsii HOM05D002009 ORTHO05D006817 5.9e-07 60.5 39 76.9
Eucgr.B01951 Eucalyptus grandis HOM05D002009 ORTHO05D006831 2.3e-06 58.5 98 37.8
TPR.G36235 Trifolium pratense HOM05D002009 ORTHO05D036482 8.6e-06 56.6 79 39.2


User provided reference genes

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