Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI17503 Sapria himalayana HOM05D003395 ORTHO05D004087 3.8e-31 137.5 67 100.0
SHI37552 Sapria himalayana HOM05D003395 ORTHO05D004087 3.5e-13 77.8 63 71.4
SHI40122 Sapria himalayana HOM05D003395 ORTHO05D004087 1.0e-12 76.3 49 83.7
SHI34458 Sapria himalayana HOM05D003395 ORTHO05D004087 1.9e-11 72.0 62 66.1
SHI10456 Sapria himalayana HOM05D003395 ORTHO05D004087 1.1e-09 66.2 48 72.9
COL.COLO4_22300 Corchorus olitorius HOM05D003395 ORTHO05D004087 1.4e-09 65.9 48 68.8
Duzib128G1779 Durio zibethinus HOM05D003395 ORTHO05D004087 2.6e-08 61.6 48 64.6
RcHm_v2.0_Chr3g0483381 Rosa chinensis HOM05D003395 ORTHO05D004087 5.8e-08 60.5 48 62.5
Prupe.7G054800 Prunus persica HOM05D003395 ORTHO05D004087 7.6e-08 60.1 48 62.5
CiPaw.09G039800 Carya illinoinensis HOM05D003395 ORTHO05D004087 1.0e-07 59.7 48 60.4
Phvul.005G175500 Phaseolus vulgaris HOM05D003395 ORTHO05D004087 1.0e-07 59.7 48 60.4
FvH4_6g24390 Fragaria vesca HOM05D003395 ORTHO05D004087 1.3e-07 59.3 48 60.4
FAN14G3261 Fragaria x ananassa HOM05D003395 ORTHO05D004087 1.3e-07 59.3 48 60.4
MBI13_g36804_MAGBIO Magnolia biondii HOM05D003395 ORTHO05D004087 1.3e-07 59.3 48 58.3
Ciclev10004294m.g Citrus clementina HOM05D003395 ORTHO05D004087 1.7e-07 58.9 48 60.4
MD14G1076700 Malus domestica HOM05D003395 ORTHO05D004087 1.7e-07 58.9 48 60.4
Solyc04g016240.3 Solanum lycopersicum HOM05D003395 ORTHO05D004087 1.7e-07 58.9 45 62.2
Sopen04g008350 Solanum pennellii HOM05D003395 ORTHO05D004087 1.7e-07 58.9 45 62.2
PGSC0003DMG400012709 Solanum tuberosum HOM05D003395 ORTHO05D004087 1.7e-07 58.9 45 62.2
VMungo1080G0039 Vigna mungo HOM05D003395 ORTHO05D004087 1.7e-07 58.9 48 60.4
TWI74G0608 Tripterygium wilfordii HOM05D003395 ORTHO05D004087 2.2e-07 58.5 48 58.3
Dinv39652 Davidia involucrata HOM05D003395 ORTHO05D004087 2.9e-07 58.2 45 64.4
Eucgr.K01721 Eucalyptus grandis HOM05D003395 ORTHO05D004087 2.9e-07 58.2 48 60.4
Glyma.13G363900 Glycine max HOM05D003395 ORTHO05D004087 2.9e-07 58.2 48 58.3
Glyma.15G010000 Glycine max HOM05D003395 ORTHO05D004087 2.9e-07 58.2 48 58.3
MBI13_g36815_MAGBIO Magnolia biondii HOM05D003395 ORTHO05D004087 2.9e-07 58.2 48 56.2
Eucgr.K01765 Eucalyptus grandis HOM05D003395 ORTHO05D004087 3.8e-07 57.8 48 60.4
Nitab4.5_0000826g0280 Nicotiana tabacum HOM05D003395 ORTHO05D004087 3.8e-07 57.8 45 60.0
Nitab4.5_0006870g0040 Nicotiana tabacum HOM05D003395 ORTHO05D004087 3.8e-07 57.8 45 60.0
Sabra15G0021800 Salix brachista HOM05D003395 ORTHO05D004087 3.8e-07 57.8 48 56.2
FAN02G0096 Fragaria x ananassa HOM05D003395 ORTHO05D004087 4.9e-07 57.4 48 58.3
Haze_19811 Corylus avellana HOM05D003395 ORTHO05D004087 6.5e-07 57.0 48 56.2
Haze_19814 Corylus avellana HOM05D003395 ORTHO05D004087 6.5e-07 57.0 48 56.2
Eucgr.K01999 Eucalyptus grandis HOM05D003395 ORTHO05D004087 6.5e-07 57.0 47 59.6
Lj3g0013293 Lotus japonicus HOM05D003395 ORTHO05D004087 6.5e-07 57.0 48 56.2
TPR.G37242 Trifolium pratense HOM05D003395 ORTHO05D004087 6.5e-07 57.0 48 56.2
CAN.G676.13 Capsicum annuum HOM05D003395 ORTHO05D004087 8.4e-07 56.6 44 61.4
FAN05G3635 Fragaria x ananassa HOM05D003395 ORTHO05D004087 8.4e-07 56.6 48 58.3
FAN09G3838 Fragaria x ananassa HOM05D003395 ORTHO05D004087 8.4e-07 56.6 48 58.3
Medtr2g103370 Medicago truncatula HOM05D003395 ORTHO05D004087 8.4e-07 56.6 48 56.2
GSVIVG01033240001 Vitis vinifera HOM05D003395 ORTHO05D004087 8.4e-07 56.6 44 61.4
MD12G1080600 Malus domestica HOM05D003395 ORTHO05D004087 1.1e-06 56.2 48 58.3
Potri.012G034800 Populus trichocarpa HOM05D003395 ORTHO05D004087 1.1e-06 56.2 48 56.2
Ca_01074_v3 Cicer arietinum L. HOM05D003395 ORTHO05D004087 1.4e-06 55.8 48 54.2
Aqoxy2G00226 Aquilegia oxysepala HOM05D003395 ORTHO05D004087 1.9e-06 55.5 48 56.2
Sabra15G0019300 Salix brachista HOM05D003395 ORTHO05D004087 1.9e-06 55.5 48 54.2
A09p50250 Brassica napus HOM05D003395 ORTHO05D004087 2.5e-06 55.1 48 60.4
BraA09t40475Z Brassica rapa HOM05D003395 ORTHO05D004087 2.5e-06 55.1 48 60.4
Psat5g301400 Pisum sativum HOM05D003395 ORTHO05D004087 2.5e-06 55.1 48 52.1
Potri.015G026200 Populus trichocarpa HOM05D003395 ORTHO05D004087 2.5e-06 55.1 48 52.1
PGSC0003DMG402030272 Solanum tuberosum HOM05D003395 ORTHO05D004087 2.5e-06 55.1 44 61.4
AT3G57350 Arabidopsis thaliana HOM05D003395 ORTHO05D004087 3.2e-06 54.7 48 54.2
Peaxi162Scf00130g00723 Petunia axillaris HOM05D003395 ORTHO05D004087 3.2e-06 54.7 45 57.8
CANSAT80G2433 Cannabis sativa HOM05D003395 ORTHO05D004087 4.2e-06 54.3 48 58.3
Nn7g36372 Nelumbo nucifera HOM05D003395 ORTHO05D004087 4.2e-06 54.3 48 56.2
arahy.Tifrunner.gnm1.ann1.13YWQX Arachis hypogaea HOM05D003395 ORTHO05D004087 5.5e-06 53.9 48 52.1
arahy.Tifrunner.gnm1.ann1.C8DH2G Arachis hypogaea HOM05D003395 ORTHO05D004087 5.5e-06 53.9 48 52.1
Carub.0005s2420 Capsella rubella HOM05D003395 ORTHO05D004087 5.5e-06 53.9 48 58.3
Atru.chr1.1149 Acer truncatum HOM05D003395 ORTHO05D004087 7.1e-06 53.5 49 61.2
AL5G38890 Arabidopsis lyrata HOM05D003395 ORTHO05D004087 7.1e-06 53.5 48 54.2
CARHR167540 Cardamine hirsuta HOM05D003395 ORTHO05D004087 7.1e-06 53.5 48 56.2
Migut.K00101 Erythranthe guttata HOM05D003395 ORTHO05D004087 7.1e-06 53.5 45 57.8
Lalb_Chr24g0395581 Lupinus albus HOM05D003395 ORTHO05D004087 7.1e-06 53.5 48 52.1
PSO210G1603 Papaver somniferum HOM05D003395 ORTHO05D004087 7.1e-06 53.5 48 58.3
PSO210G2967 Papaver somniferum HOM05D003395 ORTHO05D004087 7.1e-06 53.5 48 58.3
Thecc.05G151200 Theobroma cacao HOM05D003395 ORTHO05D004087 7.1e-06 53.5 50 60.0
MSTRG.26130 Avicennia marina HOM05D003395 ORTHO05D004087 9.3e-06 53.1 45 55.6
Sabra12G0023800 Salix brachista HOM05D003395 ORTHO05D004087 9.3e-06 53.1 48 52.1
SalBow1G6094 Salvia bowleyana HOM05D003395 ORTHO05D004087 9.3e-06 53.1 45 57.8
Sp5g05250 Schrenkiella parvula HOM05D003395 ORTHO05D004087 9.3e-06 53.1 48 58.3


User provided reference genes

Program Settings