Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI16635 Sapria himalayana HOM05D000246 ORTHO05D005396 2.8e-88 328.6 162 100.0
VMungo0540G2260 Vigna mungo HOM05D000246 ORTHO05D005396 1.8e-10 70.1 129 38.0
TAR624G1231 Trochodendron aralioides HOM05D000246 ORTHO05D005396 8.8e-10 67.8 131 38.2
GSVIVG01023325001 Vitis vinifera HOM05D000246 ORTHO05D005396 8.8e-10 67.8 129 35.7
Cc02_g22770 Coffea canephora HOM05D000246 ORTHO05D005396 1.5e-09 67.0 132 38.6
Lj6g0022943 Lotus japonicus HOM05D000246 ORTHO05D005396 1.5e-09 67.0 130 36.2
Phvul.006G216200 Phaseolus vulgaris HOM05D000246 ORTHO05D005396 5.7e-09 65.1 125 38.4
Ah.01g020570 Amaranthus hybridus HOM05D000246 ORTHO05D005396 7.5e-09 64.7 137 35.8
Medtr2g006440 Medicago truncatula HOM05D000246 ORTHO05D005396 9.8e-09 64.3 126 34.9
TPR.G2105 Trifolium pratense HOM05D000246 ORTHO05D005396 9.8e-09 64.3 128 33.6
EL10Ac9g21897 Beta vulgaris HOM05D000246 ORTHO05D005396 1.3e-08 63.9 129 40.3
Ca_00062_v3 Cicer arietinum L. HOM05D000246 ORTHO05D005396 1.3e-08 63.9 126 34.1
Atru.chr6.555 Acer truncatum HOM05D000246 ORTHO05D005396 2.2e-08 63.2 129 35.7
FAN13G0468 Fragaria x ananassa HOM05D000246 ORTHO05D005396 2.2e-08 63.2 125 33.6
Manes.10G122800 Manihot esculenta HOM05D000246 ORTHO05D005396 4.9e-08 62.0 133 36.8
Actinidia39024 Actinidia chinensis HOM05D000246 ORTHO05D005396 6.3e-08 61.6 133 33.8
TWI59G0870 Tripterygium wilfordii HOM05D000246 ORTHO05D005396 6.3e-08 61.6 123 36.6
arahy.Tifrunner.gnm1.ann1.P64QHW Arachis hypogaea HOM05D000246 ORTHO05D005396 1.1e-07 60.8 126 36.5
Eucgr.G00562 Eucalyptus grandis HOM05D000246 ORTHO05D005396 1.1e-07 60.8 126 38.1
Potri.003G015800 Populus trichocarpa HOM05D000246 ORTHO05D005396 1.1e-07 60.8 52 57.7
vmacro01744 Vaccinium macrocarpon HOM05D000246 ORTHO05D005396 1.1e-07 60.8 138 33.3
Glyma.08G188100 Glycine max HOM05D000246 ORTHO05D005396 1.4e-07 60.5 132 34.1
PGSC0003DMG400023802 Solanum tuberosum HOM05D000246 ORTHO05D005396 1.4e-07 60.5 53 50.9
FvH4_5g28920 Fragaria vesca HOM05D000246 ORTHO05D005396 1.8e-07 60.1 124 36.3
FAN18G0190 Fragaria x ananassa HOM05D000246 ORTHO05D005396 1.8e-07 60.1 124 36.3
Lalb_Chr20g0123591 Lupinus albus HOM05D000246 ORTHO05D005396 1.8e-07 60.1 47 61.7
Sopen01g046350 Solanum pennellii HOM05D000246 ORTHO05D005396 1.8e-07 60.1 53 49.1
arahy.Tifrunner.gnm1.ann1.V2A8TE Arachis hypogaea HOM05D000246 ORTHO05D005396 2.4e-07 59.7 126 35.7
Aqoxy5G02652 Aquilegia oxysepala HOM05D000246 ORTHO05D005396 3.1e-07 59.3 122 34.4
Solyc01g103960.3 Solanum lycopersicum HOM05D000246 ORTHO05D005396 3.1e-07 59.3 53 49.1
CSS0032566 Camellia sinensis var. sinensis HOM05D000246 ORTHO05D005396 5.4e-07 58.5 130 33.1
CSS0044641 Camellia sinensis var. sinensis HOM05D000246 ORTHO05D005396 5.4e-07 58.5 130 33.1
Haze_01763 Corylus avellana HOM05D000246 ORTHO05D005396 7.0e-07 58.2 42 61.9
Glyma.12G170000 Glycine max HOM05D000246 ORTHO05D005396 9.2e-07 57.8 42 61.9
Gohir.D13G034100 Gossypium hirsutum HOM05D000246 ORTHO05D005396 9.2e-07 57.8 122 33.6
Hma1.2p1_3213F.1_g334020 Hydrangea macrophylla HOM05D000246 ORTHO05D005396 9.2e-07 57.8 107 37.4
Duzib132G0704 Durio zibethinus HOM05D000246 ORTHO05D005396 1.2e-06 57.4 133 33.8
Sabra03G0008800 Salix brachista HOM05D000246 ORTHO05D005396 1.2e-06 57.4 42 66.7
Sed0017184 Sechium edule HOM05D000246 ORTHO05D005396 1.2e-06 57.4 124 35.5
Sabra03G0009100 Salix brachista HOM05D000246 ORTHO05D005396 1.6e-06 57.0 42 64.3
Sabra03G0009400 Salix brachista HOM05D000246 ORTHO05D005396 1.6e-06 57.0 42 64.3
Sabra03G0009700 Salix brachista HOM05D000246 ORTHO05D005396 1.6e-06 57.0 42 64.3
CiPaw.05G049800 Carya illinoinensis HOM05D000246 ORTHO05D005396 2.0e-06 56.6 42 57.1
arahy.Tifrunner.gnm1.ann1.9F5B0U Arachis hypogaea HOM05D000246 ORTHO05D005396 2.7e-06 56.2 42 66.7
arahy.Tifrunner.gnm1.ann1.J1FRWC Arachis hypogaea HOM05D000246 ORTHO05D005396 2.7e-06 56.2 42 66.7
QL02p099436 Quercus lobata HOM05D000246 ORTHO05D005396 2.7e-06 56.2 126 32.5
AUR62011515 Chenopodium quinoa HOM05D000246 ORTHO05D005396 7.7e-06 54.7 127 32.3
Ciclev10000077m.g Citrus clementina HOM05D000246 ORTHO05D005396 7.7e-06 54.7 126 34.1
Hma1.2p1_2221F.1_g317340 Hydrangea macrophylla HOM05D000246 ORTHO05D005396 7.7e-06 54.7 99 35.4
PGR042G0910 Punica granatum HOM05D000246 ORTHO05D005396 7.7e-06 54.7 117 37.6
RcHm_v2.0_Chr7g0221231 Rosa chinensis HOM05D000246 ORTHO05D005396 7.7e-06 54.7 47 57.4


User provided reference genes

Program Settings