Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI15006 Sapria himalayana HOM05D005820 ORTHO05D007116 1.3e-134 483.0 234 100.0
Atru.chr13.1435 Acer truncatum HOM05D005820 ORTHO05D007116 4.2e-21 105.9 180 36.7
Atru.chr12.1871 Acer truncatum HOM05D005820 ORTHO05D007116 1.0e-19 101.3 182 35.7
Cpa.g.sc43.140 Carica papaya HOM05D005820 ORTHO05D007116 6.8e-19 98.6 181 35.4
Ciclev10033588m.g Citrus clementina HOM05D005820 ORTHO05D007116 1.2e-18 97.8 177 36.2
Haze_00369 Corylus avellana HOM05D005820 ORTHO05D007116 1.5e-18 97.4 179 36.3
Manes.08G160700 Manihot esculenta HOM05D005820 ORTHO05D007116 1.7e-17 94.0 178 34.8
Cfa016076 Carpinus fangiana HOM05D005820 ORTHO05D007116 6.3e-17 92.0 178 32.6
Sabra13G0066100 Salix brachista HOM05D005820 ORTHO05D007116 7.0e-16 88.6 177 34.5
Potri.013G077200 Populus trichocarpa HOM05D005820 ORTHO05D007116 9.1e-16 88.2 179 34.6
TAR633G0012 Trochodendron aralioides HOM05D005820 ORTHO05D007116 4.5e-15 85.9 179 33.5
CiPaw.05G212600 Carya illinoinensis HOM05D005820 ORTHO05D007116 1.0e-14 84.7 180 33.9
QL09p020654 Quercus lobata HOM05D005820 ORTHO05D007116 1.3e-14 84.3 183 32.8
COL.COLO4_15131 Corchorus olitorius HOM05D005820 ORTHO05D007116 2.9e-14 83.2 180 31.7
Gohir.D03G055100 Gossypium hirsutum HOM05D005820 ORTHO05D007116 3.8e-14 82.8 183 31.7
Gorai.003G057900 Gossypium raimondii HOM05D005820 ORTHO05D007116 3.8e-14 82.8 183 31.7
Thecc.05G222900 Theobroma cacao HOM05D005820 ORTHO05D007116 3.8e-14 82.8 178 32.0
Duzib106G1003 Durio zibethinus HOM05D005820 ORTHO05D007116 2.5e-13 80.1 179 33.0
COL.COLO4_22345 Corchorus olitorius HOM05D005820 ORTHO05D007116 4.2e-13 79.3 178 31.5
Thhalv10012783m.g Eutrema salsugineum HOM05D005820 ORTHO05D007116 5.5e-13 79.0 175 32.0
TWI53G1480 Tripterygium wilfordii HOM05D005820 ORTHO05D007116 5.5e-13 79.0 178 30.3
EL10Ac4g08387 Beta vulgaris HOM05D005820 ORTHO05D007116 1.6e-12 77.4 178 29.2
arahy.Tifrunner.gnm1.ann1.9S7XN2 Arachis hypogaea HOM05D005820 ORTHO05D007116 2.8e-12 76.6 182 30.2
Sp6g27470 Schrenkiella parvula HOM05D005820 ORTHO05D007116 2.8e-12 76.6 175 32.6
EL10Ac2g03131 Beta vulgaris HOM05D005820 ORTHO05D007116 3.6e-12 76.3 178 29.2
Medtr5g082610 Medicago truncatula HOM05D005820 ORTHO05D007116 1.0e-11 74.7 177 29.9
THA.LOC104821161 Tarenaya hassleriana HOM05D005820 ORTHO05D007116 1.0e-11 74.7 177 32.2
Actinidia08766 Actinidia chinensis HOM05D005820 ORTHO05D007116 2.3e-11 73.6 182 33.0
BcaB08g36827 Brassica carinata HOM05D005820 ORTHO05D007116 3.0e-11 73.2 176 30.7
Lalb_Chr01g0000781 Lupinus albus HOM05D005820 ORTHO05D007116 4.0e-11 72.8 185 28.6
Aa31LG11G12940 Aethionema arabicum HOM05D005820 ORTHO05D007116 6.8e-11 72.0 174 29.3
Aqoxy2G01900 Aquilegia oxysepala HOM05D005820 ORTHO05D007116 6.8e-11 72.0 180 28.9
BraA10t44315Z Brassica rapa HOM05D005820 ORTHO05D007116 6.8e-11 72.0 174 30.5
TAR365G1123 Trochodendron aralioides HOM05D005820 ORTHO05D007116 6.8e-11 72.0 181 28.7
A10p22530 Brassica napus HOM05D005820 ORTHO05D007116 8.8e-11 71.6 174 30.5
DCAR_020431 Daucus carota HOM05D005820 ORTHO05D007116 8.8e-11 71.6 181 29.3
Glyma.12G014600 Glycine max HOM05D005820 ORTHO05D007116 8.8e-11 71.6 178 30.3
AT5G16690 Arabidopsis thaliana HOM05D005820 ORTHO05D007116 1.2e-10 71.2 175 32.6
CARHR196510 Cardamine hirsuta HOM05D005820 ORTHO05D007116 1.2e-10 71.2 176 30.7
AUR62033087 Chenopodium quinoa HOM05D005820 ORTHO05D007116 1.2e-10 71.2 175 28.6
Gohir.A02G125300 Gossypium hirsutum HOM05D005820 ORTHO05D007116 1.2e-10 71.2 121 34.7
TAR365G1018 Trochodendron aralioides HOM05D005820 ORTHO05D007116 1.2e-10 71.2 179 29.1
AL6G27690 Arabidopsis lyrata HOM05D005820 ORTHO05D007116 2.6e-10 70.1 177 31.6
Lj3A884T58 Lonicera japonica HOM05D005820 ORTHO05D007116 2.6e-10 70.1 179 27.9
Lj3g0016493 Lotus japonicus HOM05D005820 ORTHO05D007116 2.6e-10 70.1 217 30.4
C09p60450 Brassica napus HOM05D005820 ORTHO05D007116 3.4e-10 69.7 174 29.9
CDE02G0417 Ceratophyllum demersum HOM05D005820 ORTHO05D007116 3.4e-10 69.7 174 27.6
vmacro06371 Vaccinium macrocarpon HOM05D005820 ORTHO05D007116 4.4e-10 69.3 190 30.5
Nn3g21157 Nelumbo nucifera HOM05D005820 ORTHO05D007116 5.7e-10 68.9 179 31.3
PSO384G2364 Papaver somniferum HOM05D005820 ORTHO05D007116 7.5e-10 68.6 181 30.9
BolC9t58877H Brassica oleracea HOM05D005820 ORTHO05D007116 9.8e-10 68.2 175 30.3
CSS0036845 Camellia sinensis var. sinensis HOM05D005820 ORTHO05D007116 9.8e-10 68.2 178 28.7
Carub.0006s1489 Capsella rubella HOM05D005820 ORTHO05D007116 9.8e-10 68.2 176 31.2
Psat5g135040 Pisum sativum HOM05D005820 ORTHO05D007116 9.8e-10 68.2 177 28.2
Phvul.011G017500 Phaseolus vulgaris HOM05D005820 ORTHO05D007116 1.3e-09 67.8 175 29.1
Sc13g0011020 Simmondsia chinensis HOM05D005820 ORTHO05D007116 1.3e-09 67.8 176 27.3
CsaV3_5G005010 Cucumis sativus L. HOM05D005820 ORTHO05D007116 1.7e-09 67.4 183 30.1
ClCG01G004810 Citrullus lanatus HOM05D005820 ORTHO05D007116 2.2e-09 67.0 183 29.5
VMungo1127G1342 Vigna mungo HOM05D005820 ORTHO05D007116 2.2e-09 67.0 179 29.6
MELO3C005455.2 Cucumis melo HOM05D005820 ORTHO05D007116 2.8e-09 66.6 183 29.5
ECA232G1869 Erigeron canadensis HOM05D005820 ORTHO05D007116 4.9e-09 65.9 183 30.1
PSO339G0775 Papaver somniferum HOM05D005820 ORTHO05D007116 1.4e-08 64.3 181 29.8
PGR042G2204 Punica granatum HOM05D005820 ORTHO05D007116 1.4e-08 64.3 180 27.8
PSO210G4891 Papaver somniferum HOM05D005820 ORTHO05D007116 3.1e-08 63.2 181 29.8
PSO170G6050 Papaver somniferum HOM05D005820 ORTHO05D007116 7.0e-08 62.0 181 30.4
Cc10_g10830 Coffea canephora HOM05D005820 ORTHO05D007116 2.0e-07 60.5 180 29.4
CANSAT54G2180 Cannabis sativa HOM05D005820 ORTHO05D007116 2.7e-07 60.1 55 52.7
ECA233G1554 Erigeron canadensis HOM05D005820 ORTHO05D007116 3.5e-07 59.7 181 28.2
HanXRQChr15g0492741 Helianthus annuus HOM05D005820 ORTHO05D007116 1.0e-06 58.2 180 27.8
Sed0005542 Sechium edule HOM05D005820 ORTHO05D007116 1.3e-06 57.8 185 27.6
unitig_749.g14271 Utricularia gibba HOM05D005820 ORTHO05D007116 1.3e-06 57.8 180 28.3
Hma1.2p1_0419F.1_g149510 Hydrangea macrophylla HOM05D005820 ORTHO05D007116 1.7e-06 57.4 176 28.4
MD07G1032700 Malus domestica HOM05D005820 ORTHO05D007116 1.7e-06 57.4 179 30.7
Solyc12g013880.2 Solanum lycopersicum HOM05D005820 ORTHO05D007116 2.9e-06 56.6 180 28.9
Zm00001eb031810 Zea mays HOM05D005820 ORTHO05D007116 2.9e-06 56.6 182 24.2
Nitab4.5_0012358g0010 Nicotiana tabacum HOM05D005820 ORTHO05D007116 5.0e-06 55.8 185 28.1
Nitab4.5_0010710g0030 Nicotiana tabacum HOM05D005820 ORTHO05D007116 6.6e-06 55.5 185 29.2
Sopen12g007200 Solanum pennellii HOM05D005820 ORTHO05D007116 6.6e-06 55.5 181 29.3


User provided reference genes

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