Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI14828 Sapria himalayana HOM05D000035 ORTHO05D000047 8.7e-135 483.8 271 100.0
SHI10964 Sapria himalayana HOM05D000002 ORTHO05D000047 2.8e-16 90.1 58 82.8
SHI30675 Sapria himalayana HOM05D000002 ORTHO05D000047 2.8e-16 90.1 54 85.2
SHI04532 Sapria himalayana HOM05D000002 ORTHO05D000047 4.7e-16 89.4 59 83.1
SHI00431 Sapria himalayana HOM05D000002 ORTHO05D000047 6.2e-16 89.0 58 79.3
SHI33544 Sapria himalayana HOM05D000002 ORTHO05D000047 1.1e-15 88.2 57 78.9
SHI03848 Sapria himalayana HOM05D000002 ORTHO05D000047 1.8e-15 87.4 81 63.0
SHI13376 Sapria himalayana HOM05D000002 ORTHO05D000047 2.4e-15 87.0 50 90.0
Migut.F00764 Erythranthe guttata HOM05D000002 ORTHO05D000047 3.1e-15 86.7 58 75.9
Migut.G01342 Erythranthe guttata HOM05D000002 ORTHO05D000047 3.1e-15 86.7 58 75.9
SHI14888 Sapria himalayana HOM05D000002 ORTHO05D000047 3.1e-15 86.7 50 88.0
Hma1.2p1_1936F.1_g308230 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.3e-15 85.9 58 74.1
SHI14623 Sapria himalayana HOM05D000002 ORTHO05D000047 9.0e-15 85.1 59 76.3
Hma1.2p1_1251F.1_g270340 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.2e-14 84.7 55 80.0
SHI01905 Sapria himalayana HOM05D000002 ORTHO05D000047 3.4e-14 83.2 59 76.3
SHI12088 Sapria himalayana HOM05D000002 ORTHO05D000047 4.4e-14 82.8 58 77.6
SHI23543 Sapria himalayana HOM05D000002 ORTHO05D000047 4.4e-14 82.8 59 74.6
Migut.G00569 Erythranthe guttata HOM05D000002 ORTHO05D000047 5.8e-14 82.4 61 70.5
SHI34106 Sapria himalayana HOM05D000002 ORTHO05D000047 5.8e-14 82.4 59 78.0
TPR.G33357 Trifolium pratense HOM05D000002 ORTHO05D000047 7.6e-14 82.0 58 72.4
SHI19772 Sapria himalayana HOM05D000002 ORTHO05D000047 9.9e-14 81.6 50 88.0
SHI24099 Sapria himalayana HOM05D000002 ORTHO05D000047 1.7e-13 80.9 59 76.3
SHI34389 Sapria himalayana HOM05D000002 ORTHO05D000047 3.8e-13 79.7 58 75.9
Cpa.g.sc1.53 Carica papaya HOM05D000002 ORTHO05D000047 1.4e-12 77.8 43 86.0
SHI11798 Sapria himalayana HOM05D000002 ORTHO05D000047 1.9e-12 77.4 47 83.0
SHI06273 Sapria himalayana HOM05D000002 ORTHO05D000047 3.2e-12 76.6 56 75.0
SHI09922 Sapria himalayana HOM05D000002 ORTHO05D000047 3.2e-12 76.6 58 69.0
SHI22350 Sapria himalayana HOM05D000035 ORTHO05D366603 3.2e-12 76.6 82 51.2
SHI10794 Sapria himalayana HOM05D000035 ORTHO05D368930 9.3e-12 75.1 54 70.4
SHI01063 Sapria himalayana HOM05D000002 ORTHO05D000047 1.2e-11 74.7 70 64.3
SHI05320 Sapria himalayana HOM05D000105 ORTHO05D000023 1.2e-11 74.7 76 55.3
SHI07537 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-11 74.7 59 66.1
SHI39401 Sapria himalayana HOM05D000035 ORTHO05D000031 1.6e-11 74.3 46 78.3
HPP92_018323 Vanilla planifolia HOM05D000002 ORTHO05D000047 6.0e-11 72.4 50 72.0
SHI07485 Sapria himalayana HOM05D000002 ORTHO05D000047 7.8e-11 72.0 52 73.1
SHI11030 Sapria himalayana HOM05D000002 ORTHO05D000047 2.3e-10 70.5 50 74.0
Rhsim05G0070200 Rhododendron simsii HOM05D000002 ORTHO05D000047 3.9e-10 69.7 58 62.1
SHI41117 Sapria himalayana HOM05D000035 ORTHO05D000031 3.9e-10 69.7 64 57.8
SHI04337 Sapria himalayana HOM05D000002 ORTHO05D000001 5.1e-10 69.3 40 85.0
SHI10108 Sapria himalayana HOM05D000002 ORTHO05D000047 1.1e-09 68.2 49 75.5
SHI22247 Sapria himalayana HOM05D000002 ORTHO05D009932 4.3e-09 66.2 44 77.3
Rhsim07G0134800 Rhododendron simsii HOM05D000002 ORTHO05D000047 5.6e-09 65.9 58 58.6
Hma1.2p1_0088F.1_g044990 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 9.6e-09 65.1 44 72.7
SHI24210 Sapria himalayana HOM05D023549 ORTHO05D368821 2.1e-08 63.9 36 77.8
SHI36327 Sapria himalayana HOM05D000030 ORTHO05D000009 2.1e-08 63.9 33 87.9
SHI23066 Sapria himalayana HOM05D000002 ORTHO05D000047 2.8e-08 63.5 46 73.9
SHI04419 Sapria himalayana HOM05D000105 ORTHO05D000001 3.6e-08 63.2 44 75.0
Rhsim02G0004200 Rhododendron simsii HOM05D000002 ORTHO05D000047 6.2e-08 62.4 58 58.6
SHI20116 Sapria himalayana HOM05D000002 ORTHO05D000047 6.2e-08 62.4 38 81.6
Hma1.2p1_2308F.1_g319490 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.1e-07 61.6 58 55.2
SHI22972 Sapria himalayana HOM05D000002 ORTHO05D000047 1.1e-07 61.6 37 81.1
SHI38825 Sapria himalayana HOM05D000002 ORTHO05D000047 1.8e-07 60.8 41 78.0
MD09G1165800 Malus domestica HOM05D000002 ORTHO05D000047 2.4e-07 60.5 59 52.5
HPP92_023007 Vanilla planifolia HOM05D000002 ORTHO05D000047 2.4e-07 60.5 50 60.0
Hma1.2p1_0222F.1_g093830 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.1e-07 60.1 70 50.0
FvH4_3g30981 Fragaria vesca HOM05D000002 ORTHO05D000047 6.9e-07 58.9 50 56.0
TWI75G1635 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 6.9e-07 58.9 82 42.7
FvH4_4g14844 Fragaria vesca HOM05D000002 ORTHO05D000047 1.2e-06 58.2 78 38.5
TPR.G16838 Trifolium pratense HOM05D001340 ORTHO05D002318 1.2e-06 58.2 48 56.2
MD05G1048700 Malus domestica HOM05D000002 ORTHO05D000047 1.5e-06 57.8 82 37.8
CANSAT11G2223 Cannabis sativa HOM05D000002 ORTHO05D000047 2.0e-06 57.4 48 54.2
SHI25176 Sapria himalayana HOM05D000002 ORTHO05D000047 2.0e-06 57.4 36 77.8
SHI08769 Sapria himalayana HOM05D000319 ORTHO05D017448 2.6e-06 57.0 31 83.9
Sopen03g004910 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-06 57.0 45 60.0
Sopen03g011620 Solanum pennellii HOM05D000002 ORTHO05D000001 2.6e-06 57.0 74 45.9
Atru.chr3.2976 Acer truncatum HOM05D000002 ORTHO05D000047 3.4e-06 56.6 50 52.0
SHI27749 Sapria himalayana HOM05D000105 ORTHO05D010518 3.4e-06 56.6 31 80.6
SHI28245 Sapria himalayana HOM05D000002 ORTHO05D025741 3.4e-06 56.6 37 75.7
Sopen11g023580 Solanum pennellii HOM05D000002 ORTHO05D000047 3.4e-06 56.6 59 47.5
FvH4_6g40340 Fragaria vesca HOM05D000258 ORTHO05D000153 4.5e-06 56.2 50 54.0
Hma1.2p1_0384F.1_g140880 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.5e-06 56.2 70 41.4
SHI15215 Sapria himalayana HOM05D000002 ORTHO05D000047 4.5e-06 56.2 41 73.2
Rhsim06G0010400 Rhododendron simsii HOM05D000002 ORTHO05D000047 5.8e-06 55.8 58 50.0
Rhsim12G0120200 Rhododendron simsii HOM05D000002 ORTHO05D000047 5.8e-06 55.8 58 50.0
SHI26113 Sapria himalayana HOM05D000002 ORTHO05D000001 5.8e-06 55.8 36 80.6
SHI36210 Sapria himalayana HOM05D008593 ORTHO05D010518 5.8e-06 55.8 59 49.2
Sopen00g009270 Solanum pennellii HOM05D000002 ORTHO05D000001 5.8e-06 55.8 49 51.0
Sopen12g032940 Solanum pennellii HOM05D000002 ORTHO05D000001 5.8e-06 55.8 49 51.0
CANSAT01G0665 Cannabis sativa HOM05D000002 ORTHO05D000047 7.6e-06 55.5 59 45.8
CANSAT50G0003 Cannabis sativa HOM05D000002 ORTHO05D000047 7.6e-06 55.5 58 48.3
CANSAT54G0982 Cannabis sativa HOM05D000002 ORTHO05D000047 7.6e-06 55.5 58 48.3
SHI23084 Sapria himalayana HOM05D016427 ORTHO05D010518 7.6e-06 55.5 45 55.6
Sopen04g024650 Solanum pennellii HOM05D000002 ORTHO05D000001 7.6e-06 55.5 74 45.9
Sopen07g018350 Solanum pennellii HOM05D000002 ORTHO05D000001 7.6e-06 55.5 48 50.0
Sopen08g009030 Solanum pennellii HOM05D000002 ORTHO05D000001 7.6e-06 55.5 74 45.9
Sopen10g022800 Solanum pennellii HOM05D000002 ORTHO05D000001 7.6e-06 55.5 74 45.9
Sopen11g020720 Solanum pennellii HOM05D000002 ORTHO05D000001 7.6e-06 55.5 48 50.0
Medtr7g039280 Medicago truncatula HOM05D000002 ORTHO05D000047 9.9e-06 55.1 44 52.3
SHI11903 Sapria himalayana HOM05D000002 ORTHO05D000047 9.9e-06 55.1 34 79.4
Sopen12g020640 Solanum pennellii HOM05D000887 ORTHO05D000047 9.9e-06 55.1 46 52.2


User provided reference genes

Program Settings