Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI13620 Sapria himalayana HOM05D004227 ORTHO05D005027 2.2e-102 375.6 181 100.0
SGA_v2.0_scaffold60G20835 Striga asiatica HOM05D004227 ORTHO05D005027 5.0e-54 214.9 144 72.2
ClCG05G000140 Citrullus lanatus HOM05D004227 ORTHO05D005027 2.5e-53 212.6 159 66.7
Duzib133G0083 Durio zibethinus HOM05D004227 ORTHO05D005027 3.2e-53 212.2 126 79.4
TWI23G1276 Tripterygium wilfordii HOM05D004227 ORTHO05D005027 5.5e-53 211.5 126 79.4
Sp1g00120 Schrenkiella parvula HOM05D004227 ORTHO05D005027 7.2e-53 211.1 152 69.7
TWI59G0764 Tripterygium wilfordii HOM05D004227 ORTHO05D005027 7.2e-53 211.1 126 79.4
Manes.05G055700 Manihot esculenta HOM05D004227 ORTHO05D005027 9.4e-53 210.7 126 80.2
Duzib138G0704 Durio zibethinus HOM05D004227 ORTHO05D005027 1.2e-52 210.3 126 78.6
Gohir.A08G057900 Gossypium hirsutum HOM05D004227 ORTHO05D005027 1.2e-52 210.3 126 78.6
Gohir.D08G067200 Gossypium hirsutum HOM05D004227 ORTHO05D005027 1.2e-52 210.3 126 78.6
Gohir.D11G079800 Gossypium hirsutum HOM05D004227 ORTHO05D005027 1.2e-52 210.3 126 78.6
Gorai.004G069800 Gossypium raimondii HOM05D004227 ORTHO05D005027 1.2e-52 210.3 126 78.6
Cpa.g.sc22.26 Carica papaya HOM05D004227 ORTHO05D005027 1.6e-52 209.9 126 78.6
Gohir.A11G075100 Gossypium hirsutum HOM05D004227 ORTHO05D005027 1.6e-52 209.9 126 78.6
Gorai.007G085400 Gossypium raimondii HOM05D004227 ORTHO05D005027 1.6e-52 209.9 126 78.6
Thecc.01G396100 Theobroma cacao HOM05D004227 ORTHO05D005027 1.6e-52 209.9 126 78.6
TAR629G1537 Trochodendron aralioides HOM05D004227 ORTHO05D005027 2.1e-52 209.5 146 71.2
THA.LOC104801496 Tarenaya hassleriana HOM05D004227 ORTHO05D005027 3.6e-52 208.8 126 78.6
TAR636G2330 Trochodendron aralioides HOM05D004227 ORTHO05D005027 4.7e-52 208.4 126 79.4
CSS0010737 Camellia sinensis var. sinensis HOM05D004227 ORTHO05D005027 8.0e-52 207.6 125 78.4
Oeu030870.1 Olea europaea HOM05D004227 ORTHO05D005027 8.0e-52 207.6 126 77.8
CDE06G1820 Ceratophyllum demersum HOM05D004227 ORTHO05D005027 1.4e-51 206.8 125 78.4
CDE06G1835 Ceratophyllum demersum HOM05D004227 ORTHO05D005027 1.4e-51 206.8 125 78.4
Dinv44054 Davidia involucrata HOM05D004227 ORTHO05D005027 1.4e-51 206.8 126 77.8
FvH4_7g10360 Fragaria vesca HOM05D004227 ORTHO05D005027 1.4e-51 206.8 156 65.4
MD07G1109700 Malus domestica HOM05D004227 ORTHO05D005027 1.4e-51 206.8 126 76.2
SGA_v2.0_scaffold44G16581 Striga asiatica HOM05D004227 ORTHO05D005027 1.4e-51 206.8 126 77.8
Hma1.2p1_1508F.1_g287710 Hydrangea macrophylla HOM05D004227 ORTHO05D005027 1.8e-51 206.5 126 78.6
Nn1g00815 Nelumbo nucifera HOM05D004227 ORTHO05D005027 1.8e-51 206.5 126 79.4
Ciclev10022690m.g Citrus clementina HOM05D004227 ORTHO05D005027 2.3e-51 206.1 126 78.6
FAN01G2506 Fragaria x ananassa HOM05D004227 ORTHO05D005027 2.3e-51 206.1 126 77.0
FAN03G2167 Fragaria x ananassa HOM05D004227 ORTHO05D005027 2.3e-51 206.1 126 77.0
FAN06G3355 Fragaria x ananassa HOM05D004227 ORTHO05D005027 2.3e-51 206.1 126 77.0
FAN10G0507 Fragaria x ananassa HOM05D004227 ORTHO05D005027 2.3e-51 206.1 126 77.0
FAN10G0749 Fragaria x ananassa HOM05D004227 ORTHO05D005027 2.3e-51 206.1 126 77.0
MBI19_g27175_MAGBIO Magnolia biondii HOM05D004227 ORTHO05D005027 2.3e-51 206.1 123 80.5
RcHm_v2.0_Chr1g0348061 Rosa chinensis HOM05D004227 ORTHO05D005027 2.3e-51 206.1 126 77.0
BcaC07g42439 Brassica carinata HOM05D004227 ORTHO05D005027 3.0e-51 205.7 126 78.6
A09p69360 Brassica napus HOM05D004227 ORTHO05D005027 3.0e-51 205.7 126 78.6
BolC8t52927H Brassica oleracea HOM05D004227 ORTHO05D005027 3.0e-51 205.7 126 78.6
Dinv43609 Davidia involucrata HOM05D004227 ORTHO05D005027 3.0e-51 205.7 126 78.6
Nitab4.5_0003321g0070 Nicotiana tabacum HOM05D004227 ORTHO05D005027 3.0e-51 205.7 124 79.8
Nitab4.5_0004457g0020 Nicotiana tabacum HOM05D004227 ORTHO05D005027 3.0e-51 205.7 129 77.5
Prupe.2G133100 Prunus persica HOM05D004227 ORTHO05D005027 3.0e-51 205.7 126 75.4
Rhsim03G0159900 Rhododendron simsii HOM05D004227 ORTHO05D005027 3.0e-51 205.7 126 76.2
unitig_46.g18760 Utricularia gibba HOM05D004227 ORTHO05D005027 3.0e-51 205.7 143 69.9
AUR62014174 Chenopodium quinoa HOM05D004227 ORTHO05D005027 4.0e-51 205.3 126 79.4
AUR62039531 Chenopodium quinoa HOM05D004227 ORTHO05D005027 4.0e-51 205.3 126 79.4
COL.COLO4_14773 Corchorus olitorius HOM05D004227 ORTHO05D005027 4.0e-51 205.3 126 77.0
Migut.F00534 Erythranthe guttata HOM05D004227 ORTHO05D005027 4.0e-51 205.3 126 77.8
Lj9A555T36 Lonicera japonica HOM05D004227 ORTHO05D005027 4.0e-51 205.3 123 78.9
THA.LOC104816996 Tarenaya hassleriana HOM05D004227 ORTHO05D005027 4.0e-51 205.3 121 80.2
COL.COLO4_12397 Corchorus olitorius HOM05D004227 ORTHO05D005027 5.2e-51 204.9 126 77.0
CsaV3_3G007250 Cucumis sativus L. HOM05D004227 ORTHO05D005027 5.2e-51 204.9 127 77.2
FAN06G2246 Fragaria x ananassa HOM05D004227 ORTHO05D005027 5.2e-51 204.9 126 76.2
Lsat_1_v5_gn_0_10121 Lactuca sativa HOM05D004227 ORTHO05D005027 5.2e-51 204.9 120 80.8
Lj3g0012613 Lotus japonicus HOM05D004227 ORTHO05D005027 5.2e-51 204.9 126 75.4
Aa31LG1G11540 Aethionema arabicum HOM05D004227 ORTHO05D005027 6.8e-51 204.5 126 77.8
ECA232G0872 Erigeron canadensis HOM05D004227 ORTHO05D005027 6.8e-51 204.5 121 80.2
HanXRQChr09g0252831 Helianthus annuus HOM05D004227 ORTHO05D005027 6.8e-51 204.5 121 80.2
Lj3g0003497 Lotus japonicus HOM05D004227 ORTHO05D005027 6.8e-51 204.5 126 75.4
Psat5g001800 Pisum sativum HOM05D004227 ORTHO05D005027 6.8e-51 204.5 126 75.4
Potri.014G049700 Populus trichocarpa HOM05D004227 ORTHO05D005027 6.8e-51 204.5 125 76.8
EL10Ac6g14165 Beta vulgaris HOM05D004227 ORTHO05D005027 8.8e-51 204.1 126 77.8
Lj7A548G44 Lonicera japonica HOM05D004227 ORTHO05D005027 8.8e-51 204.1 119 80.7
PSO063G7112 Papaver somniferum HOM05D004227 ORTHO05D005027 8.8e-51 204.1 126 77.8
PSO782G5116 Papaver somniferum HOM05D004227 ORTHO05D005027 8.8e-51 204.1 126 77.8
Actinidia13618 Actinidia chinensis HOM05D004227 ORTHO05D005027 1.2e-50 203.8 125 76.0
Ah.01g017970 Amaranthus hybridus HOM05D004227 ORTHO05D005027 1.2e-50 203.8 125 79.2
Aqoxy109s003 Aquilegia oxysepala HOM05D004227 ORTHO05D005027 1.2e-50 203.8 125 78.4
Aqoxy3G01907 Aquilegia oxysepala HOM05D004227 ORTHO05D005027 1.2e-50 203.8 125 78.4
Aqoxy3G01910 Aquilegia oxysepala HOM05D004227 ORTHO05D005027 1.2e-50 203.8 125 78.4
BcaC07g42337 Brassica carinata HOM05D004227 ORTHO05D005027 1.2e-50 203.8 126 76.2
MELO3C005946.2 Cucumis melo HOM05D004227 ORTHO05D005027 1.2e-50 203.8 127 76.4
Nitab4.5_0002153g0060 Nicotiana tabacum HOM05D004227 ORTHO05D005027 1.2e-50 203.8 119 80.7
Oeu046442.1 Olea europaea HOM05D004227 ORTHO05D005027 1.2e-50 203.8 126 76.2
HPP92_014889 Vanilla planifolia HOM05D004227 ORTHO05D005027 1.2e-50 203.8 119 80.7
HPP92_014893 Vanilla planifolia HOM05D004227 ORTHO05D005027 1.2e-50 203.8 119 80.7
BraA09t42281Z Brassica rapa HOM05D004227 ORTHO05D005027 1.5e-50 203.4 126 77.8
CANSAT25G0195 Cannabis sativa HOM05D004227 ORTHO05D005027 1.5e-50 203.4 126 74.6
Nitab4.5_0002359g0040 Nicotiana tabacum HOM05D004227 ORTHO05D005027 1.5e-50 203.4 124 79.0
unitig_37.g12485 Utricularia gibba HOM05D004227 ORTHO05D005027 1.5e-50 203.4 128 75.8
MSTRG.27225 Avicennia marina HOM05D004227 ORTHO05D005027 2.0e-50 203.0 123 79.7
CARHR000190 Cardamine hirsuta HOM05D004227 ORTHO05D005027 2.0e-50 203.0 126 77.0
Hund24961 Selenicereus undatus HOM05D004227 ORTHO05D005027 2.0e-50 203.0 126 77.0
Aqoxy91s003 Aquilegia oxysepala HOM05D004227 ORTHO05D005027 2.6e-50 202.6 125 78.4
Phvul.010G046900 Phaseolus vulgaris HOM05D004227 ORTHO05D005027 2.6e-50 202.6 126 74.6
SEGI_06195 Sequoiadendron giganteum HOM05D004227 ORTHO05D005027 2.6e-50 202.6 123 78.9
SEGI_27062 Sequoiadendron giganteum HOM05D004227 ORTHO05D005027 2.6e-50 202.6 123 78.9
vmacro05443 Vaccinium macrocarpon HOM05D004227 ORTHO05D005027 2.6e-50 202.6 120 79.2
VMungo0331G1366 Vigna mungo HOM05D004227 ORTHO05D005027 2.6e-50 202.6 126 74.6
Actinidia31661 Actinidia chinensis HOM05D004227 ORTHO05D005027 3.4e-50 202.2 124 75.8
Ca_15636_v3 Cicer arietinum L. HOM05D004227 ORTHO05D005027 3.4e-50 202.2 126 74.6
Medtr3g118110 Medicago truncatula HOM05D004227 ORTHO05D005027 3.4e-50 202.2 126 74.6
Sed0011885 Sechium edule HOM05D004227 ORTHO05D005027 3.4e-50 202.2 118 79.7
Solyc03g093680.4 Solanum lycopersicum HOM05D004227 ORTHO05D005027 3.4e-50 202.2 119 79.8
Sopen03g024580 Solanum pennellii HOM05D004227 ORTHO05D005027 3.4e-50 202.2 119 79.8
PGSC0003DMG400021002 Solanum tuberosum HOM05D004227 ORTHO05D005027 3.4e-50 202.2 119 79.8
TPR.G38529 Trifolium pratense HOM05D004227 ORTHO05D005027 3.4e-50 202.2 126 74.6
arahy.Tifrunner.gnm1.ann1.CPA9TZ Arachis hypogaea HOM05D004227 ORTHO05D005027 4.4e-50 201.8 126 74.6
arahy.Tifrunner.gnm1.ann1.RC63K2 Arachis hypogaea HOM05D004227 ORTHO05D005027 4.4e-50 201.8 126 74.6
BcaB03g13634 Brassica carinata HOM05D004227 ORTHO05D005027 4.4e-50 201.8 122 77.9
C05p00070 Brassica napus HOM05D004227 ORTHO05D005027 4.4e-50 201.8 122 77.9
CAN.G460.2 Capsicum annuum HOM05D004227 ORTHO05D005027 4.4e-50 201.8 119 80.7
Glyma.03G109200 Glycine max HOM05D004227 ORTHO05D005027 4.4e-50 201.8 126 74.6
Glyma.07G115700 Glycine max HOM05D004227 ORTHO05D005027 4.4e-50 201.8 126 74.6
HanXRQChr15g0493591 Helianthus annuus HOM05D004227 ORTHO05D005027 4.4e-50 201.8 118 80.5
Peaxi162Scf01305g00032 Petunia axillaris HOM05D004227 ORTHO05D005027 4.4e-50 201.8 119 79.8
Potri.002G138500 Populus trichocarpa HOM05D004227 ORTHO05D005027 4.4e-50 201.8 125 76.0
Sabra02G0107500 Salix brachista HOM05D004227 ORTHO05D005027 4.4e-50 201.8 125 76.0
A10p00100 Brassica napus HOM05D004227 ORTHO05D005027 5.7e-50 201.4 118 80.5
BraA10t42288Z Brassica rapa HOM05D004227 ORTHO05D005027 5.7e-50 201.4 118 80.5
SalBow3G0312 Salvia bowleyana HOM05D004227 ORTHO05D005027 7.5e-50 201.1 118 79.7
SalBow3G4020 Salvia bowleyana HOM05D004227 ORTHO05D005027 7.5e-50 201.1 118 79.7
Zm00001eb174310 Zea mays HOM05D004227 ORTHO05D005027 7.5e-50 201.1 124 78.2
AL1G10090 Arabidopsis lyrata HOM05D004227 ORTHO05D005027 1.7e-49 199.9 126 75.4
Os12g0287200 Oryza sativa ssp. japonica HOM05D004227 ORTHO05D005027 1.7e-49 199.9 120 78.3
Sc24g0004090 Simmondsia chinensis HOM05D004227 ORTHO05D005027 1.7e-49 199.9 137 70.8
Thhalv10009013m.g Eutrema salsugineum HOM05D004227 ORTHO05D005027 2.2e-49 199.5 126 75.4
PGR004G2481 Punica granatum HOM05D004227 ORTHO05D005027 2.2e-49 199.5 123 74.8
AagrBONN_evm.TU.Sc2ySwM_344.2698 Anthoceros agrestis HOM05D004227 ORTHO05D005027 2.8e-49 199.1 125 76.0
Eucgr.D01223 Eucalyptus grandis HOM05D004227 ORTHO05D005027 2.8e-49 199.1 123 74.8
Os08g0107900 Oryza sativa ssp. japonica HOM05D004227 ORTHO05D005027 2.8e-49 199.1 120 77.5
BolC5t28794H Brassica oleracea HOM05D004227 ORTHO05D005027 3.7e-49 198.7 130 73.1
Phvul.006G161800 Phaseolus vulgaris HOM05D004227 ORTHO05D005027 3.7e-49 198.7 126 73.8
Pp3c2_21720 Physcomitrium patens HOM05D004227 ORTHO05D005027 3.7e-49 198.7 128 75.8
PGR004G2111 Punica granatum HOM05D004227 ORTHO05D005027 3.7e-49 198.7 123 74.8
Zm00001eb260270 Zea mays HOM05D004227 ORTHO05D005027 4.8e-49 198.4 115 80.0
Glyma.15G097500 Glycine max HOM05D004227 ORTHO05D005027 6.3e-49 198.0 126 73.0
AT1G02140 Arabidopsis thaliana HOM05D004227 ORTHO05D005027 8.3e-49 197.6 126 74.6
Pp3c1_16440 Physcomitrium patens HOM05D004227 ORTHO05D005027 8.3e-49 197.6 118 78.8
ATR0090G010 Amborella trichopoda HOM05D004227 ORTHO05D005027 1.1e-48 197.2 121 76.9
Carub.0001s0001 Capsella rubella HOM05D004227 ORTHO05D005027 1.1e-48 197.2 124 77.4
Lalb_Chr06g0171081 Lupinus albus HOM05D004227 ORTHO05D005027 2.4e-48 196.1 123 74.8
Rhsim13G0168500 Rhododendron simsii HOM05D004227 ORTHO05D005027 4.1e-48 195.3 127 73.2
Lalb_Chr01g0012541 Lupinus albus HOM05D004227 ORTHO05D005027 7.0e-48 194.5 140 67.1
Mapoly0032s0045 Marchantia polymorpha HOM05D004227 ORTHO05D005027 2.0e-47 193.0 123 74.0
QL04p029953 Quercus lobata HOM05D004227 ORTHO05D005027 2.7e-47 192.6 123 73.2
QL07p006029 Quercus lobata HOM05D004227 ORTHO05D005027 2.7e-47 192.6 123 73.2
Cfa009863 Carpinus fangiana HOM05D004227 ORTHO05D005027 5.9e-47 191.4 119 74.8
CiPaw.14G019900 Carya illinoinensis HOM05D004227 ORTHO05D005027 2.3e-46 189.5 119 73.9
Peaxi162Scf00304g01023 Petunia axillaris HOM05D004227 ORTHO05D005027 8.0e-44 181.0 119 73.9
Atru.chr2.217 Acer truncatum HOM05D004227 ORTHO05D005027 1.1e-40 170.6 106 75.5
Haze_23235 Corylus avellana HOM05D004227 ORTHO05D005027 1.8e-40 169.9 175 50.9
MCO04G284 Micromonas commoda HOM05D004227 ORTHO05D005027 2.4e-40 169.5 118 64.4
Haze_27249 Corylus avellana HOM05D004227 ORTHO05D005027 3.1e-40 169.1 115 68.7
Cre09.g392692 Chlamydomonas reinhardtii HOM05D004227 ORTHO05D005027 2.3e-38 162.9 131 58.0
Medtr3g109260 Medicago truncatula HOM05D004227 ORTHO05D005027 5.0e-38 161.8 125 63.2
Pp3c1_16390 Physcomitrium patens HOM05D004227 ORTHO05D005027 4.0e-35 152.1 115 65.2
CDE06G1723 Ceratophyllum demersum HOM05D004227 ORTHO05D005027 5.2e-35 151.8 87 81.6
VMungo0540G1169 Vigna mungo HOM05D004227 ORTHO05D005027 2.7e-31 139.4 86 75.6
Atru.chr5.117 Acer truncatum HOM05D004227 ORTHO05D005027 3.5e-31 139.0 83 81.9
HPP92_020677 Vanilla planifolia HOM05D004227 ORTHO05D005027 9.5e-29 131.0 74 83.8
CiPaw.13G025400 Carya illinoinensis HOM05D004227 ORTHO05D005027 3.1e-27 125.9 118 55.1
MD00G1129300 Malus domestica HOM05D004227 ORTHO05D005027 4.0e-27 125.6 73 78.1
Cc02_g04830 Coffea canephora HOM05D004227 ORTHO05D005027 1.4e-24 117.1 77 72.7
GSVIVG01013876001 Vitis vinifera HOM05D004227 ORTHO05D005027 7.0e-24 114.8 77 70.1
Lsat_1_v5_gn_2_127120 Lactuca sativa HOM05D004227 ORTHO05D005027 1.2e-23 114.0 77 70.1
C08p54180 Brassica napus HOM05D004227 ORTHO05D005027 3.9e-22 109.0 89 60.7
Actinidia01038 Actinidia chinensis HOM05D004227 ORTHO05D005027 3.3e-21 105.9 81 67.9
Aqoxy3G01908 Aquilegia oxysepala HOM05D004227 ORTHO05D005027 3.3e-21 105.9 96 59.4
Aqoxy91s002 Aquilegia oxysepala HOM05D004227 ORTHO05D005027 2.8e-20 102.8 96 58.3
Aqoxy3G01911 Aquilegia oxysepala HOM05D002706 ORTHO05D003253 4.7e-20 102.1 96 58.3
CBR_g19771 Chara braunii HOM05D004227 ORTHO05D005027 4.9e-17 92.0 56 71.4
Rhsim13G0168700 Rhododendron simsii HOM05D004227 ORTHO05D005027 6.6e-14 81.6 46 73.9
Aqoxy109s002 Aquilegia oxysepala HOM05D002706 ORTHO05D003253 4.3e-13 79.0 71 56.3
Haze_23858 Corylus avellana HOM05D004227 ORTHO05D034883 2.2e-09 66.6 38 73.7


User provided reference genes

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