Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI13305 Sapria himalayana HOM05D000392 ORTHO05D002065 1.3e-41 172.6 81 100.0
Sopen01g017650 Solanum pennellii HOM05D000002 ORTHO05D002065 4.4e-18 94.4 107 47.7
Sopen01g036580 Solanum pennellii HOM05D000002 ORTHO05D002065 4.4e-18 94.4 107 47.7
Sopen02g013820 Solanum pennellii HOM05D000002 ORTHO05D002065 4.4e-18 94.4 107 47.7
Sopen03g006780 Solanum pennellii HOM05D000002 ORTHO05D002065 4.4e-18 94.4 107 47.7
Sopen03g030560 Solanum pennellii HOM05D000002 ORTHO05D002065 4.4e-18 94.4 107 47.7
Sopen04g029040 Solanum pennellii HOM05D000002 ORTHO05D002065 4.4e-18 94.4 107 47.7
Sopen06g006170 Solanum pennellii HOM05D000002 ORTHO05D002065 4.4e-18 94.4 107 47.7
Sopen07g029130 Solanum pennellii HOM05D000002 ORTHO05D002065 4.4e-18 94.4 107 47.7
Sopen10g028630 Solanum pennellii HOM05D000002 ORTHO05D002065 4.4e-18 94.4 107 47.7
Sopen11g008810 Solanum pennellii HOM05D000002 ORTHO05D002065 4.4e-18 94.4 107 47.7
Sopen11g025450 Solanum pennellii HOM05D000002 ORTHO05D002065 4.4e-18 94.4 107 47.7
Sopen12g028980 Solanum pennellii HOM05D000002 ORTHO05D002065 4.4e-18 94.4 107 47.7
Sopen06g028770 Solanum pennellii HOM05D000002 ORTHO05D002065 1.7e-17 92.4 107 46.7
Sopen11g024400 Solanum pennellii HOM05D000002 ORTHO05D002065 2.9e-17 91.7 107 45.8
Sopen10g024560 Solanum pennellii HOM05D000002 ORTHO05D002065 6.4e-17 90.5 107 46.7
Sopen12g008380 Solanum pennellii HOM05D000002 ORTHO05D002065 8.3e-17 90.1 107 45.8
Sopen09g030360 Solanum pennellii HOM05D000002 ORTHO05D002065 1.9e-16 89.0 109 44.0
Sopen08g018170 Solanum pennellii HOM05D000002 ORTHO05D002065 2.4e-16 88.6 109 43.1
Rhsim07G0041900 Rhododendron simsii HOM05D000002 ORTHO05D002065 4.1e-16 87.8 107 43.9
Sopen03g018110 Solanum pennellii HOM05D000002 ORTHO05D002065 4.1e-16 87.8 109 43.1
Sopen04g008860 Solanum pennellii HOM05D000002 ORTHO05D002065 4.1e-16 87.8 109 43.1
Sopen06g003740 Solanum pennellii HOM05D000392 ORTHO05D002065 4.1e-16 87.8 109 43.1
Sopen08g008670 Solanum pennellii HOM05D000002 ORTHO05D002065 4.1e-16 87.8 109 43.1
Sopen11g016080 Solanum pennellii HOM05D000002 ORTHO05D002065 4.1e-16 87.8 109 43.1
Sopen05g016150 Solanum pennellii HOM05D000002 ORTHO05D002065 5.4e-16 87.4 109 42.2
Sopen11g011480 Solanum pennellii HOM05D000392 ORTHO05D002065 5.4e-16 87.4 109 43.1
Sopen07g005570 Solanum pennellii HOM05D000002 ORTHO05D002065 7.0e-16 87.0 107 44.9
Sopen11g024270 Solanum pennellii HOM05D000002 ORTHO05D002065 7.0e-16 87.0 107 44.9
SHI16421 Sapria himalayana HOM05D000002 ORTHO05D002065 9.2e-16 86.7 109 46.8
Sopen03g024570 Solanum pennellii HOM05D000002 ORTHO05D002065 9.2e-16 86.7 107 43.0
Sopen08g005930 Solanum pennellii HOM05D000002 ORTHO05D002065 1.2e-15 86.3 109 43.1
Sopen01g006130 Solanum pennellii HOM05D000002 ORTHO05D002065 1.6e-15 85.9 109 43.1
Sopen01g019060 Solanum pennellii HOM05D000002 ORTHO05D002065 1.6e-15 85.9 109 43.1
Sopen01g024170 Solanum pennellii HOM05D000002 ORTHO05D002065 1.6e-15 85.9 109 43.1
Sopen01g026840 Solanum pennellii HOM05D000002 ORTHO05D002065 1.6e-15 85.9 109 43.1
Sopen03g026840 Solanum pennellii HOM05D000002 ORTHO05D002065 1.6e-15 85.9 109 43.1
Sopen04g024530 Solanum pennellii HOM05D000002 ORTHO05D002065 1.6e-15 85.9 109 43.1
Sopen05g021470 Solanum pennellii HOM05D000002 ORTHO05D002065 1.6e-15 85.9 109 43.1
Sopen05g026510 Solanum pennellii HOM05D000002 ORTHO05D002065 1.6e-15 85.9 109 43.1
Sopen05g029240 Solanum pennellii HOM05D000392 ORTHO05D002065 1.6e-15 85.9 109 43.1
Sopen06g014830 Solanum pennellii HOM05D000002 ORTHO05D002065 1.6e-15 85.9 109 43.1
Sopen08g025440 Solanum pennellii HOM05D000002 ORTHO05D002065 1.6e-15 85.9 109 43.1
Sopen11g010460 Solanum pennellii HOM05D000002 ORTHO05D002065 1.6e-15 85.9 109 43.1
Sopen11g025130 Solanum pennellii HOM05D000002 ORTHO05D002065 1.6e-15 85.9 109 43.1
Sopen12g021410 Solanum pennellii HOM05D000002 ORTHO05D002065 1.6e-15 85.9 109 43.1
Sopen12g021690 Solanum pennellii HOM05D000002 ORTHO05D002065 1.6e-15 85.9 109 43.1
Rhsim01G0238600 Rhododendron simsii HOM05D000002 ORTHO05D002065 2.0e-15 85.5 107 43.0
Sopen01g001570 Solanum pennellii HOM05D000392 ORTHO05D002065 2.0e-15 85.5 109 42.2
Sopen01g005920 Solanum pennellii HOM05D000392 ORTHO05D002065 2.0e-15 85.5 109 42.2
Sopen01g015900 Solanum pennellii HOM05D000002 ORTHO05D002065 2.0e-15 85.5 109 43.1
Sopen02g003080 Solanum pennellii HOM05D000002 ORTHO05D002065 2.0e-15 85.5 109 42.2
Sopen02g010090 Solanum pennellii HOM05D000002 ORTHO05D002065 2.0e-15 85.5 109 42.2
Sopen02g017660 Solanum pennellii HOM05D000392 ORTHO05D002065 2.0e-15 85.5 109 42.2
Sopen02g022980 Solanum pennellii HOM05D000002 ORTHO05D002065 2.0e-15 85.5 109 42.2
Sopen02g030500 Solanum pennellii HOM05D000392 ORTHO05D002065 2.0e-15 85.5 109 42.2
Sopen03g036760 Solanum pennellii HOM05D000392 ORTHO05D002065 2.0e-15 85.5 109 42.2
Sopen04g018150 Solanum pennellii HOM05D000006 ORTHO05D002065 2.0e-15 85.5 109 42.2
Sopen04g023800 Solanum pennellii HOM05D000392 ORTHO05D002065 2.0e-15 85.5 109 42.2
Sopen04g025720 Solanum pennellii HOM05D000002 ORTHO05D002065 2.0e-15 85.5 109 42.2
Sopen04g026730 Solanum pennellii HOM05D000392 ORTHO05D002065 2.0e-15 85.5 109 42.2
Sopen05g001590 Solanum pennellii HOM05D000392 ORTHO05D000001 2.0e-15 85.5 109 42.2
Sopen05g006720 Solanum pennellii HOM05D000392 ORTHO05D002065 2.0e-15 85.5 109 42.2
Sopen05g025330 Solanum pennellii HOM05D000002 ORTHO05D002065 2.0e-15 85.5 109 42.2
Sopen06g019790 Solanum pennellii HOM05D000002 ORTHO05D002065 2.0e-15 85.5 109 42.2
Sopen06g020490 Solanum pennellii HOM05D000392 ORTHO05D002065 2.0e-15 85.5 109 42.2
Sopen06g021220 Solanum pennellii HOM05D000392 ORTHO05D002065 2.0e-15 85.5 109 42.2
Sopen06g025370 Solanum pennellii HOM05D000392 ORTHO05D002065 2.0e-15 85.5 109 42.2
Sopen06g029030 Solanum pennellii HOM05D000392 ORTHO05D002065 2.0e-15 85.5 109 42.2
Sopen07g004880 Solanum pennellii HOM05D000002 ORTHO05D002065 2.0e-15 85.5 109 42.2
Sopen07g020050 Solanum pennellii HOM05D000002 ORTHO05D002065 2.0e-15 85.5 109 42.2
Sopen07g022000 Solanum pennellii HOM05D000392 ORTHO05D002065 2.0e-15 85.5 109 42.2
Sopen07g028380 Solanum pennellii HOM05D000392 ORTHO05D002065 2.0e-15 85.5 109 42.2
Sopen07g032760 Solanum pennellii HOM05D000392 ORTHO05D002065 2.0e-15 85.5 109 42.2
Sopen07g033180 Solanum pennellii HOM05D000392 ORTHO05D002065 2.0e-15 85.5 109 42.2
Sopen08g029640 Solanum pennellii HOM05D000392 ORTHO05D002065 2.0e-15 85.5 109 42.2
Sopen09g007350 Solanum pennellii HOM05D000392 ORTHO05D002065 2.0e-15 85.5 109 42.2
Sopen09g007940 Solanum pennellii HOM05D000392 ORTHO05D002065 2.0e-15 85.5 109 42.2
Sopen09g010790 Solanum pennellii HOM05D000392 ORTHO05D002065 2.0e-15 85.5 109 42.2
Sopen09g015720 Solanum pennellii HOM05D000392 ORTHO05D002065 2.0e-15 85.5 109 42.2
Sopen09g027600 Solanum pennellii HOM05D000392 ORTHO05D002065 2.0e-15 85.5 109 42.2
Sopen09g031920 Solanum pennellii HOM05D000002 ORTHO05D002065 2.0e-15 85.5 109 42.2
Sopen10g006660 Solanum pennellii HOM05D000392 ORTHO05D002065 2.0e-15 85.5 109 42.2
Sopen10g010780 Solanum pennellii HOM05D000002 ORTHO05D002065 2.0e-15 85.5 109 42.2
Sopen10g021220 Solanum pennellii HOM05D000392 ORTHO05D002065 2.0e-15 85.5 109 42.2
Sopen10g021340 Solanum pennellii HOM05D003930 ORTHO05D004742 2.0e-15 85.5 109 42.2
Sopen10g023800 Solanum pennellii HOM05D000002 ORTHO05D002065 2.0e-15 85.5 109 42.2
Sopen11g010530 Solanum pennellii HOM05D000002 ORTHO05D002065 2.0e-15 85.5 109 42.2
Sopen11g026270 Solanum pennellii HOM05D000392 ORTHO05D002065 2.0e-15 85.5 109 42.2
Sopen12g020430 Solanum pennellii HOM05D000392 ORTHO05D002065 2.0e-15 85.5 109 42.2
Sopen12g023100 Solanum pennellii HOM05D000392 ORTHO05D002065 2.0e-15 85.5 109 42.2
Sopen07g012530 Solanum pennellii HOM05D000002 ORTHO05D002065 2.7e-15 85.1 109 41.3
Sopen06g017280 Solanum pennellii HOM05D000002 ORTHO05D002065 3.5e-15 84.7 109 43.1
Sopen09g024720 Solanum pennellii HOM05D000392 ORTHO05D002065 4.6e-15 84.3 109 42.2
Rhsim03G0114900 Rhododendron simsii HOM05D000002 ORTHO05D002065 6.0e-15 84.0 107 42.1
TPR.G16794 Trifolium pratense HOM05D000002 ORTHO05D002065 6.0e-15 84.0 111 44.1
ECA232G1868 Erigeron canadensis HOM05D000002 ORTHO05D002065 7.8e-15 83.6 109 41.3
Sopen03g010500 Solanum pennellii HOM05D000002 ORTHO05D002065 7.8e-15 83.6 107 44.9
CAN.G1627.8 Capsicum annuum HOM05D003021 ORTHO05D002065 1.0e-14 83.2 110 40.9
Sopen05g014660 Solanum pennellii HOM05D000002 ORTHO05D002065 1.0e-14 83.2 107 42.1
Sopen08g005170 Solanum pennellii HOM05D000002 ORTHO05D002065 1.3e-14 82.8 109 42.2
Sopen02g005500 Solanum pennellii HOM05D000002 ORTHO05D002065 2.3e-14 82.0 109 42.2
Sopen07g021750 Solanum pennellii HOM05D000002 ORTHO05D002065 2.3e-14 82.0 107 41.1
Sopen08g009910 Solanum pennellii HOM05D000002 ORTHO05D002065 3.0e-14 81.6 108 41.7
Sopen12g022710 Solanum pennellii HOM05D000002 ORTHO05D002065 1.9e-13 79.0 109 41.3
Sopen05g008440 Solanum pennellii HOM05D000002 ORTHO05D002065 3.3e-13 78.2 109 41.3
Sopen08g010130 Solanum pennellii HOM05D000002 ORTHO05D002065 5.6e-13 77.4 109 40.4
SHI11733 Sapria himalayana HOM05D000002 ORTHO05D002065 9.5e-13 76.6 102 46.1
SHI17865 Sapria himalayana HOM05D000392 ORTHO05D002065 9.5e-13 76.6 71 54.9
Sopen03g019930 Solanum pennellii HOM05D000002 ORTHO05D002065 9.5e-13 76.6 109 40.4
Sopen04g012860 Solanum pennellii HOM05D000002 ORTHO05D002065 9.5e-13 76.6 109 39.4
TPR.G40444 Trifolium pratense HOM05D000002 ORTHO05D002065 9.5e-13 76.6 109 37.6
Sopen05g026210 Solanum pennellii HOM05D000002 ORTHO05D002065 1.2e-12 76.3 107 38.3
Sopen06g006920 Solanum pennellii HOM05D000002 ORTHO05D002065 1.6e-12 75.9 109 40.4
Sopen02g005490 Solanum pennellii HOM05D000002 ORTHO05D002065 2.8e-12 75.1 99 42.4
Sopen05g014110 Solanum pennellii HOM05D000392 ORTHO05D002065 3.6e-12 74.7 108 39.8
Sopen12g020570 Solanum pennellii HOM05D000002 ORTHO05D002065 4.7e-12 74.3 45 68.9
CAN.G1711.9 Capsicum annuum HOM05D000151 ORTHO05D002065 8.1e-12 73.6 94 40.4
HanXRQChr17g0541591 Helianthus annuus HOM05D000002 ORTHO05D002065 4.0e-11 71.2 109 34.9
Thhalv10011182m.g Eutrema salsugineum HOM05D003502 ORTHO05D004250 8.9e-11 70.1 105 36.2
SHI33183 Sapria himalayana HOM05D000002 ORTHO05D002065 1.5e-10 69.3 46 56.5
ECA246G2492 Erigeron canadensis HOM05D000002 ORTHO05D002065 2.6e-10 68.6 109 34.9
SHI29201 Sapria himalayana HOM05D000392 ORTHO05D002065 4.4e-10 67.8 77 49.4
ECA246G1630 Erigeron canadensis HOM05D000002 ORTHO05D002065 7.5e-10 67.0 106 34.9
TPR.G25331 Trifolium pratense HOM05D000002 ORTHO05D002065 7.5e-10 67.0 45 57.8
TPR.G30722 Trifolium pratense HOM05D000002 ORTHO05D002065 7.5e-10 67.0 46 56.5
CAN.G1463.1 Capsicum annuum HOM05D002687 ORTHO05D002065 9.9e-10 66.6 45 57.8
RcHm_v2.0_Chr1g0367381 Rosa chinensis HOM05D000002 ORTHO05D002065 4.9e-09 64.3 97 38.1
SHI29116 Sapria himalayana HOM05D000392 ORTHO05D000610 6.4e-09 63.9 55 58.2
Sopen12g010420 Solanum pennellii HOM05D000002 ORTHO05D002065 1.1e-08 63.2 89 42.7
ECA247G0139 Erigeron canadensis HOM05D000002 ORTHO05D002065 1.4e-08 62.8 109 33.0
CAN.G587.32 Capsicum annuum HOM05D000002 ORTHO05D000001 1.9e-08 62.4 45 55.6
FvH4_6g44542 Fragaria vesca HOM05D000002 ORTHO05D002065 2.4e-08 62.0 97 35.1
SHI19299 Sapria himalayana HOM05D000392 ORTHO05D002065 3.2e-08 61.6 77 44.2
Sopen08g009950 Solanum pennellii HOM05D000002 ORTHO05D002065 3.2e-08 61.6 42 57.1
SHI26024 Sapria himalayana HOM05D000002 ORTHO05D002065 4.1e-08 61.2 86 39.5
FvH4_6g39331 Fragaria vesca HOM05D000002 ORTHO05D002065 7.1e-08 60.5 96 34.4
RcHm_v2.0_Chr2g0138291 Rosa chinensis HOM05D000002 ORTHO05D002065 9.2e-08 60.1 95 41.1
RcHm_v2.0_Chr2g0163801 Rosa chinensis HOM05D000002 ORTHO05D002065 9.2e-08 60.1 95 41.1
RcHm_v2.0_Chr7g0186831 Rosa chinensis HOM05D000002 ORTHO05D002065 9.2e-08 60.1 95 41.1
SHI16336 Sapria himalayana HOM05D000392 ORTHO05D370683 2.1e-07 58.9 34 79.4
SHI10820 Sapria himalayana HOM05D000002 ORTHO05D002065 3.5e-07 58.2 110 33.6
FvH4_4g13933 Fragaria vesca HOM05D000002 ORTHO05D002065 6.0e-07 57.4 96 33.3
RhsimUnG0247500 Rhododendron simsii HOM05D000002 ORTHO05D002065 7.8e-07 57.0 86 39.5
SHI24969 Sapria himalayana HOM05D000024 ORTHO05D002065 1.7e-06 55.8 79 41.8
Manes.01G054202 Manihot esculenta HOM05D000002 ORTHO05D002065 2.3e-06 55.5 45 53.3
Atru.chr10.1217 Acer truncatum HOM05D000002 ORTHO05D002065 3.0e-06 55.1 46 52.2
Aa31LG3G5740 Aethionema arabicum HOM05D000002 ORTHO05D002065 3.0e-06 55.1 43 41.9
SHI18174 Sapria himalayana HOM05D000002 ORTHO05D002065 3.9e-06 54.7 92 40.2
SHI01192 Sapria himalayana HOM05D000002 ORTHO05D002065 6.6e-06 53.9 77 35.1
SHI04534 Sapria himalayana HOM05D000392 ORTHO05D002065 6.6e-06 53.9 68 48.5


User provided reference genes

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