Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI13201 Sapria himalayana HOM05D002964 ORTHO05D003498 3.1e-150 535.0 260 100.0
SHI21706 Sapria himalayana HOM05D000392 ORTHO05D001257 6.4e-18 95.5 84 60.7
SHI01198 Sapria himalayana HOM05D000392 ORTHO05D000610 2.0e-11 73.9 51 64.7
Eucgr.C02230 Eucalyptus grandis HOM05D000392 ORTHO05D000610 7.5e-11 72.0 71 50.7
Eucgr.B02654 Eucalyptus grandis HOM05D000392 ORTHO05D000610 9.8e-11 71.6 58 56.9
Eucgr.C02227 Eucalyptus grandis HOM05D000392 ORTHO05D000610 1.3e-10 71.2 71 50.7
Glyma.03G255000 Glycine max HOM05D002964 ORTHO05D003498 1.7e-10 70.9 63 47.6
Glyma.19G252600 Glycine max HOM05D002964 ORTHO05D003498 1.7e-10 70.9 63 47.6
SHI02164 Sapria himalayana HOM05D000392 ORTHO05D000610 1.7e-10 70.9 44 70.5
Eucgr.G02034 Eucalyptus grandis HOM05D000392 ORTHO05D000610 2.2e-10 70.5 71 50.7
Eucgr.J02764 Eucalyptus grandis HOM05D000392 ORTHO05D000610 2.2e-10 70.5 71 50.7
PGSC0003DMG400033876 Solanum tuberosum HOM05D002964 ORTHO05D003498 3.7e-10 69.7 62 46.8
Eucgr.L01342 Eucalyptus grandis HOM05D000392 ORTHO05D000610 8.3e-10 68.6 58 58.6
Medtr7g116890 Medicago truncatula HOM05D002964 ORTHO05D003498 1.1e-09 68.2 63 47.6
Eucgr.E03172 Eucalyptus grandis HOM05D000392 ORTHO05D000610 2.4e-09 67.0 58 56.9
Eucgr.G01379 Eucalyptus grandis HOM05D000392 ORTHO05D000610 3.2e-09 66.6 71 47.9
Nitab4.5_0003779g0050 Nicotiana tabacum HOM05D002964 ORTHO05D003498 3.2e-09 66.6 60 45.0
QL04p059655 Quercus lobata HOM05D002964 ORTHO05D003498 3.2e-09 66.6 81 39.5
Actinidia02807 Actinidia chinensis HOM05D002964 ORTHO05D003498 7.0e-09 65.5 60 46.7
Haze_15611 Corylus avellana HOM05D002964 ORTHO05D003498 7.0e-09 65.5 61 45.9
Eucgr.D00527 Eucalyptus grandis HOM05D000392 ORTHO05D000610 7.0e-09 65.5 71 47.9
QL02p015160 Quercus lobata HOM05D002964 ORTHO05D003498 7.0e-09 65.5 61 45.9
SHI06801 Sapria himalayana HOM05D000392 ORTHO05D000610 7.0e-09 65.5 69 52.2
TPR.G4811 Trifolium pratense HOM05D002964 ORTHO05D003498 7.0e-09 65.5 62 45.2
Solyc05g050220.3 Solanum lycopersicum HOM05D002964 ORTHO05D003498 9.2e-09 65.1 62 43.5
Sopen05g028650 Solanum pennellii HOM05D002964 ORTHO05D003498 1.2e-08 64.7 62 43.5
GSVIVG01027040001 Vitis vinifera HOM05D002964 ORTHO05D003498 1.2e-08 64.7 61 45.9
Manes.05G026700 Manihot esculenta HOM05D002964 ORTHO05D003498 1.6e-08 64.3 79 40.5
CiPaw.01G071000 Carya illinoinensis HOM05D002964 ORTHO05D003498 2.1e-08 63.9 61 44.3
Actinidia28491 Actinidia chinensis HOM05D002964 ORTHO05D003498 2.7e-08 63.5 61 45.9
arahy.Tifrunner.gnm1.ann1.IH31ZD Arachis hypogaea HOM05D002964 ORTHO05D003498 2.7e-08 63.5 63 44.4
arahy.Tifrunner.gnm1.ann1.ZU4V4B Arachis hypogaea HOM05D002964 ORTHO05D003498 2.7e-08 63.5 63 44.4
Manes.01G249900 Manihot esculenta HOM05D002964 ORTHO05D003498 2.7e-08 63.5 61 45.9
Ca_09488_v3 Cicer arietinum L. HOM05D002964 ORTHO05D003498 3.5e-08 63.2 63 46.0
Cc02_g38910 Coffea canephora HOM05D002964 ORTHO05D003498 4.6e-08 62.8 61 44.3
Lalb_Chr17g0342241 Lupinus albus HOM05D002964 ORTHO05D003498 4.6e-08 62.8 63 44.4
SHI07643 Sapria himalayana HOM05D000392 ORTHO05D000610 4.6e-08 62.8 48 56.2
DCAR_006961 Daucus carota HOM05D002964 ORTHO05D003498 6.0e-08 62.4 77 39.0
Rhsim07G0007600 Rhododendron simsii HOM05D002964 ORTHO05D003498 6.0e-08 62.4 89 34.8
SHI15007 Sapria himalayana HOM05D000392 ORTHO05D000610 6.0e-08 62.4 42 64.3
vmacro22521 Vaccinium macrocarpon HOM05D002964 ORTHO05D003498 6.0e-08 62.4 61 42.6
Lj1g0022187 Lotus japonicus HOM05D002964 ORTHO05D003498 7.8e-08 62.0 63 44.4
MD01G1074700 Malus domestica HOM05D002964 ORTHO05D003498 7.8e-08 62.0 79 43.0
Cfa003839 Carpinus fangiana HOM05D002964 ORTHO05D003498 1.0e-07 61.6 61 42.6
CANSAT80G0627 Cannabis sativa HOM05D002964 ORTHO05D003498 1.3e-07 61.2 79 36.7
Psat3g004000 Pisum sativum HOM05D002964 ORTHO05D003498 1.3e-07 61.2 63 44.4
Thecc.03G044100 Theobroma cacao HOM05D000392 ORTHO05D000610 1.7e-07 60.8 50 58.0
Migut.B01828 Erythranthe guttata HOM05D002964 ORTHO05D003498 2.3e-07 60.5 86 39.5
Gohir.A08G126200 Gossypium hirsutum HOM05D002964 ORTHO05D003498 2.3e-07 60.5 64 42.2
TWI23G0265 Tripterygium wilfordii HOM05D002964 ORTHO05D003498 2.3e-07 60.5 67 43.3
VMungo0540G1601 Vigna mungo HOM05D002964 ORTHO05D003498 2.3e-07 60.5 79 38.0
CsaV3_3G008360 Cucumis sativus L. HOM05D002964 ORTHO05D003498 3.0e-07 60.1 68 42.6
Dinv32548 Davidia involucrata HOM05D002964 ORTHO05D003498 3.0e-07 60.1 75 38.7
Duzib133G0452 Durio zibethinus HOM05D002964 ORTHO05D003498 3.0e-07 60.1 79 38.0
Glyma.07G060400 Glycine max HOM05D002964 ORTHO05D003498 3.0e-07 60.1 60 45.0
Phvul.006G109700 Phaseolus vulgaris HOM05D002964 ORTHO05D003498 3.0e-07 60.1 63 46.0
Sed0018793 Sechium edule HOM05D002964 ORTHO05D003498 3.9e-07 59.7 68 42.6
Sc13g0009500 Simmondsia chinensis HOM05D002964 ORTHO05D003498 3.9e-07 59.7 88 43.2
Atru.chr5.612 Acer truncatum HOM05D002964 ORTHO05D003498 5.0e-07 59.3 79 39.2
Ciclev10020314m.g Citrus clementina HOM05D002964 ORTHO05D003498 5.0e-07 59.3 81 38.3
Nitab4.5_0000305g0190 Nicotiana tabacum HOM05D002964 ORTHO05D003498 5.0e-07 59.3 61 42.6
Nitab4.5_0007386g0010 Nicotiana tabacum HOM05D002964 ORTHO05D003498 5.0e-07 59.3 61 42.6
Peaxi162Scf01012g00240 Petunia axillaris HOM05D002964 ORTHO05D003498 5.0e-07 59.3 61 42.6
Potri.014G094200 Populus trichocarpa HOM05D002964 ORTHO05D003498 5.0e-07 59.3 61 42.6
Solyc01g095460.3 Solanum lycopersicum HOM05D002964 ORTHO05D003498 5.0e-07 59.3 61 42.6
Sopen01g039210 Solanum pennellii HOM05D002964 ORTHO05D003498 5.0e-07 59.3 61 42.6
PGSC0003DMG400000088 Solanum tuberosum HOM05D002964 ORTHO05D003498 5.0e-07 59.3 61 42.6
Thecc.01G348400 Theobroma cacao HOM05D002964 ORTHO05D003498 5.0e-07 59.3 62 43.5
ClCG05G001030 Citrullus lanatus HOM05D002964 ORTHO05D003498 6.6e-07 58.9 68 41.2
MELO3C006054.2 Cucumis melo HOM05D002964 ORTHO05D003498 6.6e-07 58.9 68 41.2
Gohir.D08G147500 Gossypium hirsutum HOM05D002964 ORTHO05D003498 6.6e-07 58.9 64 40.6
Gohir.D11G098900 Gossypium hirsutum HOM05D002964 ORTHO05D003498 6.6e-07 58.9 61 42.6
Gorai.004G153100 Gossypium raimondii HOM05D002964 ORTHO05D003498 6.6e-07 58.9 64 40.6
Gorai.007G105100 Gossypium raimondii HOM05D002964 ORTHO05D003498 6.6e-07 58.9 61 42.6
CANSAT56G2985 Cannabis sativa HOM05D002964 ORTHO05D003498 8.6e-07 58.5 61 41.0
CAN.G986.51 Capsicum annuum HOM05D002964 ORTHO05D003498 8.6e-07 58.5 61 42.6
Sabra14G0068800 Salix brachista HOM05D002964 ORTHO05D003498 8.6e-07 58.5 61 42.6
Cpa.g.sc194.18 Carica papaya HOM05D002964 ORTHO05D003498 1.1e-06 58.2 81 38.3
FAN26G2630 Fragaria x ananassa HOM05D001459 ORTHO05D001359 1.5e-06 57.8 79 41.8
Hma1.2p1_0216F.1_g091440 Hydrangea macrophylla HOM05D002964 ORTHO05D003498 1.5e-06 57.8 62 45.2
Thecc.04G075800 Theobroma cacao HOM05D000392 ORTHO05D000610 1.5e-06 57.8 72 41.7
TAR629G0874 Trochodendron aralioides HOM05D002964 ORTHO05D003498 1.5e-06 57.8 61 42.6
VMungo0331G1027 Vigna mungo HOM05D002964 ORTHO05D003498 1.5e-06 57.8 60 43.3
Ah.05g179930 Amaranthus hybridus HOM05D002964 ORTHO05D003498 1.9e-06 57.4 61 44.3
CSS0046846 Camellia sinensis var. sinensis HOM05D002964 ORTHO05D003498 1.9e-06 57.4 75 37.3
Duzib138G1760 Durio zibethinus HOM05D002964 ORTHO05D003498 1.9e-06 57.4 61 41.0
Eucgr.E00078 Eucalyptus grandis HOM05D002964 ORTHO05D003498 1.9e-06 57.4 38 63.2
Gohir.A12G110600 Gossypium hirsutum HOM05D002964 ORTHO05D003498 1.9e-06 57.4 61 41.0
Lalb_Chr04g0261701 Lupinus albus HOM05D002964 ORTHO05D003498 1.9e-06 57.4 61 41.0
Nn7g37373 Nelumbo nucifera HOM05D002964 ORTHO05D003498 1.9e-06 57.4 60 43.3
Glyma.16G029000 Glycine max HOM05D002964 ORTHO05D003498 2.5e-06 57.0 60 43.3
Lalb_Chr10g0100161 Lupinus albus HOM05D002964 ORTHO05D003498 2.5e-06 57.0 63 42.9
MD07G1143800 Malus domestica HOM05D002964 ORTHO05D003498 2.5e-06 57.0 79 40.5
Prupe.2G182800 Prunus persica HOM05D002964 ORTHO05D003498 2.5e-06 57.0 77 39.0
FAN28G1442 Fragaria x ananassa HOM05D001459 ORTHO05D001359 3.3e-06 56.6 79 40.5
Potri.002G167100 Populus trichocarpa HOM05D002964 ORTHO05D003498 3.3e-06 56.6 62 43.5
TAR636G0864 Trochodendron aralioides HOM05D002964 ORTHO05D003498 3.3e-06 56.6 62 41.9
FvH4_1g13880 Fragaria vesca HOM05D001459 ORTHO05D001359 4.3e-06 56.2 79 40.5
FAN19G1027 Fragaria x ananassa HOM05D001459 ORTHO05D001359 4.3e-06 56.2 79 40.5
Phvul.010G108800 Phaseolus vulgaris HOM05D002964 ORTHO05D003498 4.3e-06 56.2 60 43.3
PGR031G3045 Punica granatum HOM05D002964 ORTHO05D003498 4.3e-06 56.2 65 40.0
FAN01G2403 Fragaria x ananassa HOM05D002964 ORTHO05D003498 5.6e-06 55.8 61 41.0
Gohir.A11G093900 Gossypium hirsutum HOM05D002964 ORTHO05D003498 5.6e-06 55.8 59 40.7
Nn1g01783 Nelumbo nucifera HOM05D002964 ORTHO05D003498 5.6e-06 55.8 79 38.0
SalBow3G2159 Salvia bowleyana HOM05D002964 ORTHO05D003498 5.6e-06 55.8 86 36.0
SHI05721 Sapria himalayana HOM05D000392 ORTHO05D000610 5.6e-06 55.8 51 52.9
SHI12426 Sapria himalayana HOM05D000392 ORTHO05D000610 5.6e-06 55.8 31 71.0
Sc01g0003020 Simmondsia chinensis HOM05D002964 ORTHO05D003498 7.3e-06 55.5 63 44.4
HanXRQChr17g0562621 Helianthus annuus HOM05D002964 ORTHO05D003498 9.5e-06 55.1 70 38.6
Hund27724 Selenicereus undatus HOM05D002964 ORTHO05D003498 9.5e-06 55.1 60 46.7
Hund27737 Selenicereus undatus HOM05D002964 ORTHO05D003498 9.5e-06 55.1 60 46.7
Zm00001eb296340 Zea mays HOM05D002964 ORTHO05D003498 9.5e-06 55.1 62 43.5


User provided reference genes

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