Gene: Sopen01g039210

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g039210
  • Transcript Identifier Sopen01g039210.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 96962853-96966617 : positive

Gene Family Information

  • ID HOM05D002964
  • #Genes/#Species 232/91
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g039210.1

Descriptions

  • Description Transcriptional activator TAF-1 (Fragment) - Nicotiana tabacum (Common tobacco), encodes a bZIP G-box binding protein whose expression is induced by ABA. It has been shown to bind to Adh that contains the G-box and is induced by cold and water deprivation. GBF3 has been shown to be expressed mostly in the root and dark-grown leaves. GBF3 can act as homodimers and as heterodimers with GFB1, GBF2 and GBF4. In addition, GBF3°Øs DNA binding activity is enhanced by GIP1, GPRI1 and GPRI2. | G-box binding factor 3 (GBF3) | CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor , G-box binding, MFMR , bZIP transcription factor, bZIP-1 | BEST Arabidopsis thaliana protein match is: G-box binding factor 2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT2G46270
GO:0019760
ISO
PLAZA Integrative Orthologyglucosinolate metabolic process AT4G01120
GO:0010468
ISO
PLAZA Integrative Orthologyregulation of gene expression Zm00001eb296340
GO:0009637
ISO
PLAZA Integrative Orthologyresponse to blue light AT4G01120

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0043565
IEA
InterProsequence-specific DNA binding
GO:0003677
ISO
PLAZA Integrative OrthologyDNA binding AT4G01120
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G46270
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT2G46270
GO:0044877
ISO
PLAZA Integrative Orthologyprotein-containing complex binding Zm00001eb296340

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus Zm00001eb296340
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT4G01120
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G46270

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004827 Basic-leucine zipper domain
IPR044827 G-box-binding factor-like
IPR012900 G-box binding protein, multifunctional mosaic region
Mapman id Description
15.5.4.1 RNA biosynthesis.transcriptional regulation.bZIP transcription factor superfamily.transcription factor (bZIP)