Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI12358 Sapria himalayana HOM05D005493 ORTHO05D007154 0.0e+00 1170.2 562 100.0
ClCG01G010900 Citrullus lanatus HOM05D005493 ORTHO05D007154 5.2e-49 199.9 135 69.6
CiPaw.10G081900 Carya illinoinensis HOM05D005493 ORTHO05D007154 1.2e-48 198.7 135 66.7
Atru.chr1.2258 Acer truncatum HOM05D005493 ORTHO05D007154 1.5e-48 198.4 135 65.9
Sed0001140 Sechium edule HOM05D005493 ORTHO05D007154 4.4e-48 196.8 135 69.6
Ciclev10015889m.g Citrus clementina HOM05D005493 ORTHO05D007154 5.7e-48 196.4 135 66.7
Haze_07019 Corylus avellana HOM05D005493 ORTHO05D007154 5.7e-48 196.4 135 65.9
Nn1g07522 Nelumbo nucifera HOM05D005493 ORTHO05D007154 9.8e-48 195.7 123 70.7
Manes.13G088900 Manihot esculenta HOM05D005493 ORTHO05D007154 1.3e-47 195.3 135 66.7
MELO3C026067.2 Cucumis melo HOM05D005493 ORTHO05D007154 1.7e-47 194.9 135 65.9
CsaV3_1G015560 Cucumis sativus L. HOM05D005493 ORTHO05D007154 2.2e-47 194.5 124 71.8
Dinv15338 Davidia involucrata HOM05D005493 ORTHO05D007154 2.2e-47 194.5 130 66.9
THA.LOC104806738 Tarenaya hassleriana HOM05D005493 ORTHO05D007154 2.8e-47 194.1 135 64.4
Cfa000035 Carpinus fangiana HOM05D005493 ORTHO05D007154 4.8e-47 193.4 135 64.4
Sp2g12390 Schrenkiella parvula HOM05D005493 ORTHO05D007154 4.8e-47 193.4 135 65.2
Hund29945 Selenicereus undatus HOM05D005493 ORTHO05D007154 4.8e-47 193.4 124 71.8
Dinv02850 Davidia involucrata HOM05D005493 ORTHO05D007154 8.3e-47 192.6 124 70.2
Ah.11g043160 Amaranthus hybridus HOM05D005493 ORTHO05D007154 1.4e-46 191.8 124 71.0
Thhalv10000943m.g Eutrema salsugineum HOM05D005493 ORTHO05D007154 1.4e-46 191.8 135 64.4
Glyma.09G014500 Glycine max HOM05D005493 ORTHO05D007154 1.4e-46 191.8 124 70.2
MBI14_g10146_MAGBIO Magnolia biondii HOM05D005493 ORTHO05D007154 1.8e-46 191.4 124 69.4
Lj1A1246T23 Lonicera japonica HOM05D005493 ORTHO05D007154 3.1e-46 190.7 135 64.4
Lalb_Chr18g0057311 Lupinus albus HOM05D005493 ORTHO05D007154 3.1e-46 190.7 124 69.4
QL05p067786 Quercus lobata HOM05D005493 ORTHO05D007154 3.1e-46 190.7 121 70.2
EL10Ac8g19414 Beta vulgaris HOM05D005493 ORTHO05D007154 4.1e-46 190.3 124 69.4
Glyma.15G120100 Glycine max HOM05D005493 ORTHO05D007154 4.1e-46 190.3 124 69.4
Psat1g172480 Pisum sativum HOM05D005493 ORTHO05D007154 4.1e-46 190.3 135 65.2
Sc17g0007990 Simmondsia chinensis HOM05D005493 ORTHO05D007154 4.1e-46 190.3 124 71.0
TAR626G1878 Trochodendron aralioides HOM05D005493 ORTHO05D007154 5.4e-46 189.9 124 70.2
Aa31sc219G70 Aethionema arabicum HOM05D005493 ORTHO05D007154 7.0e-46 189.5 135 64.4
arahy.Tifrunner.gnm1.ann1.N8508C Arachis hypogaea HOM05D005493 ORTHO05D007154 7.0e-46 189.5 124 69.4
CDE05G0194 Ceratophyllum demersum HOM05D005493 ORTHO05D007154 7.0e-46 189.5 124 68.5
arahy.Tifrunner.gnm1.ann1.2D6L40 Arachis hypogaea HOM05D005493 ORTHO05D007154 9.1e-46 189.1 124 68.5
Lj6g0009296 Lotus japonicus HOM05D005493 ORTHO05D007154 9.1e-46 189.1 124 68.5
Sabra06G0004100 Salix brachista HOM05D005493 ORTHO05D007154 9.1e-46 189.1 121 71.9
AT5G47680 Arabidopsis thaliana HOM05D005493 ORTHO05D007154 1.2e-45 188.7 135 63.7
Cpa.g.sc27.228 Carica papaya HOM05D005493 ORTHO05D007154 1.2e-45 188.7 135 64.4
BcaB07g30764 Brassica carinata HOM05D005493 ORTHO05D007154 1.6e-45 188.3 135 63.0
CARHR173630 Cardamine hirsuta HOM05D005493 ORTHO05D007154 1.6e-45 188.3 135 63.7
AUR62034063 Chenopodium quinoa HOM05D005493 ORTHO05D007154 1.6e-45 188.3 120 70.8
Ca_00763_v3 Cicer arietinum L. HOM05D005493 ORTHO05D007154 1.6e-45 188.3 125 68.0
COL.COLO4_31918 Corchorus olitorius HOM05D005493 ORTHO05D007154 1.6e-45 188.3 121 68.6
C09p29920 Brassica napus HOM05D005493 ORTHO05D007154 2.0e-45 188.0 135 63.0
BolC9t55855H Brassica oleracea HOM05D005493 ORTHO05D007154 2.0e-45 188.0 135 63.0
Phvul.006G138500 Phaseolus vulgaris HOM05D005493 ORTHO05D007154 2.0e-45 188.0 124 66.1
CDE05G0023 Ceratophyllum demersum HOM05D005493 ORTHO05D007154 2.7e-45 187.6 124 67.7
AUR62033011 Chenopodium quinoa HOM05D005493 ORTHO05D007154 2.7e-45 187.6 124 69.4
PSO339G5884 Papaver somniferum HOM05D005493 ORTHO05D007154 2.7e-45 187.6 124 67.7
Potri.006G004900 Populus trichocarpa HOM05D005493 ORTHO05D007154 3.5e-45 187.2 124 70.2
BcaC04g21607 Brassica carinata HOM05D005493 ORTHO05D007154 4.5e-45 186.8 135 62.2
Gohir.D05G178600 Gossypium hirsutum HOM05D005493 ORTHO05D007154 4.5e-45 186.8 135 63.0
Gorai.009G184000 Gossypium raimondii HOM05D005493 ORTHO05D007154 4.5e-45 186.8 135 63.0
Nitab4.5_0001296g0130 Nicotiana tabacum HOM05D005493 ORTHO05D007154 4.5e-45 186.8 135 63.7
BolC7t43675H Brassica oleracea HOM05D005493 ORTHO05D007154 5.9e-45 186.4 135 62.2
Carub.0008s0010 Capsella rubella HOM05D005493 ORTHO05D007154 5.9e-45 186.4 135 63.0
Sopen11g007500 Solanum pennellii HOM05D005493 ORTHO05D007154 5.9e-45 186.4 135 62.2
Aqoxy1G04259 Aquilegia oxysepala HOM05D005493 ORTHO05D007154 7.7e-45 186.0 124 68.5
C07p31340 Brassica napus HOM05D005493 ORTHO05D007154 7.7e-45 186.0 135 62.2
Cc09_g00320 Coffea canephora HOM05D005493 ORTHO05D007154 7.7e-45 186.0 124 65.3
Gohir.A05G175500 Gossypium hirsutum HOM05D005493 ORTHO05D007154 7.7e-45 186.0 135 62.2
VMungo0540G1721 Vigna mungo HOM05D005493 ORTHO05D007154 7.7e-45 186.0 124 67.7
A09p23180 Brassica napus HOM05D005493 ORTHO05D007154 1.0e-44 185.7 135 62.2
BraA09t37921Z Brassica rapa HOM05D005493 ORTHO05D007154 1.0e-44 185.7 135 62.2
Eucgr.E03858 Eucalyptus grandis HOM05D005493 ORTHO05D007154 1.0e-44 185.7 121 69.4
Peaxi162Scf00827g00517 Petunia axillaris HOM05D005493 ORTHO05D007154 1.0e-44 185.7 135 63.0
Potri.016G005500 Populus trichocarpa HOM05D005493 ORTHO05D007154 1.0e-44 185.7 124 66.9
BcaC06g34232 Brassica carinata HOM05D005493 ORTHO05D007154 1.3e-44 185.3 135 61.5
CSS0047473 Camellia sinensis var. sinensis HOM05D005493 ORTHO05D007154 1.3e-44 185.3 135 63.0
DCAR_006316 Daucus carota HOM05D005493 ORTHO05D007154 1.3e-44 185.3 124 66.9
TWI38G1153 Tripterygium wilfordii HOM05D005493 ORTHO05D007154 1.3e-44 185.3 135 63.7
Hma1.2p1_1175F.1_g264030 Hydrangea macrophylla HOM05D005493 ORTHO05D007154 1.7e-44 184.9 124 66.9
Lsat_1_v5_gn_4_63901 Lactuca sativa HOM05D005493 ORTHO05D007154 1.7e-44 184.9 124 66.9
Thecc.06G236400 Theobroma cacao HOM05D005493 ORTHO05D007154 1.7e-44 184.9 135 63.0
Duzib160G0837 Durio zibethinus HOM05D005493 ORTHO05D007154 2.2e-44 184.5 135 62.2
FAN28G0158 Fragaria x ananassa HOM05D005493 ORTHO05D007154 2.2e-44 184.5 135 60.7
Medtr2g027010 Medicago truncatula HOM05D005493 ORTHO05D007154 2.2e-44 184.5 124 67.7
TWI63G0139 Tripterygium wilfordii HOM05D005493 ORTHO05D007154 2.2e-44 184.5 135 65.2
A06p44860 Brassica napus HOM05D005493 ORTHO05D007154 2.9e-44 184.1 124 65.3
BcaC06g31350 Brassica carinata HOM05D005493 ORTHO05D007154 3.8e-44 183.7 135 62.2
CANSAT56G4202 Cannabis sativa HOM05D005493 ORTHO05D007154 3.8e-44 183.7 135 61.5
FvH4_1g24140 Fragaria vesca HOM05D005493 ORTHO05D007154 3.8e-44 183.7 135 60.7
FAN19G1729 Fragaria x ananassa HOM05D005493 ORTHO05D007154 3.8e-44 183.7 135 60.7
FAN23G1811 Fragaria x ananassa HOM05D005493 ORTHO05D007154 3.8e-44 183.7 135 60.7
RcHm_v2.0_Chr2g0120371 Rosa chinensis HOM05D005493 ORTHO05D007154 3.8e-44 183.7 135 61.5
PGSC0003DMG400013365 Solanum tuberosum HOM05D005493 ORTHO05D007154 3.8e-44 183.7 135 61.5
SGA_v2.0_scaffold7G03695 Striga asiatica HOM05D005493 ORTHO05D007154 3.8e-44 183.7 135 62.2
Zm00001eb253250 Zea mays HOM05D005493 ORTHO05D007154 3.8e-44 183.7 121 68.6
AL8G10270 Arabidopsis lyrata HOM05D005493 ORTHO05D007154 6.5e-44 183.0 135 62.2
Duzib192G0504 Durio zibethinus HOM05D005493 ORTHO05D007154 6.5e-44 183.0 135 61.5
vmacro03608 Vaccinium macrocarpon HOM05D005493 ORTHO05D007154 6.5e-44 183.0 121 65.3
BraA06t27358Z Brassica rapa HOM05D005493 ORTHO05D007154 8.5e-44 182.6 124 64.5
CAN.G1156.21 Capsicum annuum HOM05D005493 ORTHO05D007154 8.5e-44 182.6 124 66.1
Solyc11g012760.2 Solanum lycopersicum HOM05D005493 ORTHO05D007154 1.1e-43 182.2 124 65.3
HanXRQChr16g0515751 Helianthus annuus HOM05D005493 ORTHO05D007154 1.9e-43 181.4 124 65.3
Rhsim13G0140700 Rhododendron simsii HOM05D005493 ORTHO05D007154 1.9e-43 181.4 124 64.5
Actinidia39254 Actinidia chinensis HOM05D005493 ORTHO05D007154 2.5e-43 181.0 135 61.5
Migut.M01444 Erythranthe guttata HOM05D005493 ORTHO05D007154 7.2e-43 179.5 135 60.0
ATR0751G138 Amborella trichopoda HOM05D005493 ORTHO05D007154 9.5e-43 179.1 124 66.1
Prupe.4G003700 Prunus persica HOM05D005493 ORTHO05D007154 9.5e-43 179.1 124 64.5
TPR.G17550 Trifolium pratense HOM05D005493 ORTHO05D007154 1.2e-42 178.7 124 66.1
HPP92_027483 Vanilla planifolia HOM05D005493 ORTHO05D007154 1.2e-42 178.7 122 63.9
MSTRG.7128 Avicennia marina HOM05D005493 ORTHO05D007154 1.6e-42 178.3 124 63.7
MD10G1339200 Malus domestica HOM05D005493 ORTHO05D007154 1.6e-42 178.3 124 64.5
Oeu025962.1 Olea europaea HOM05D005493 ORTHO05D007154 2.1e-42 177.9 135 60.0
ECA232G3574 Erigeron canadensis HOM05D005493 ORTHO05D007154 3.6e-42 177.2 124 66.1
SGA_v2.0_scaffold186G40127 Striga asiatica HOM05D005493 ORTHO05D007154 3.6e-42 177.2 124 64.5
SalBow8G5358 Salvia bowleyana HOM05D005493 ORTHO05D007154 8.0e-42 176.0 124 62.1
PGR042G0366 Punica granatum HOM05D005493 ORTHO05D007154 3.0e-41 174.1 121 67.8
SEGI_02626 Sequoiadendron giganteum HOM05D005493 ORTHO05D007154 9.8e-40 169.1 123 62.6
MSTRG.16053 Avicennia marina HOM05D005493 ORTHO05D007154 4.1e-38 163.7 124 57.3
Rhsim13G0140600 Rhododendron simsii HOM05D005493 ORTHO05D007154 3.5e-37 160.6 109 64.2
Pp3c1_33120 Physcomitrium patens HOM05D005493 ORTHO05D007154 3.3e-35 154.1 121 59.5
GSVIVG01002894001 Vitis vinifera HOM05D005493 ORTHO05D007154 3.6e-34 150.6 96 70.8
Mapoly0011s0174 Marchantia polymorpha HOM05D005493 ORTHO05D007154 1.0e-33 149.1 124 54.8
CBR_g3993 Chara braunii HOM05D005493 ORTHO05D007154 3.4e-32 144.1 135 51.1
SHI11774 Sapria himalayana HOM05D012376 ORTHO05D006507 1.3e-31 142.1 98 78.6
Pp3c2_12110 Physcomitrium patens HOM05D005493 ORTHO05D007154 1.7e-28 131.7 117 50.4
SHI17237 Sapria himalayana HOM05D000139 ORTHO05D000103 1.9e-27 128.3 105 67.6
SHI27159 Sapria himalayana HOM05D000002 ORTHO05D000001 1.9e-27 128.3 95 71.6
SHI06012 Sapria himalayana HOM05D001959 ORTHO05D001955 2.5e-27 127.9 87 78.2
SHI15282 Sapria himalayana HOM05D012376 ORTHO05D006881 1.6e-26 125.2 166 51.8
Os02g0725600 Oryza sativa ssp. japonica HOM05D005493 ORTHO05D007154 3.1e-25 120.9 80 71.2
SMO358G0363 Selaginella moellendorffii HOM05D005493 ORTHO05D007154 4.0e-25 120.6 121 47.9
SHI05153 Sapria himalayana HOM05D006273 ORTHO05D007607 7.5e-24 116.3 83 73.5
SHI16674 Sapria himalayana HOM05D004640 ORTHO05D005489 1.3e-23 115.5 82 73.2
SHI05595 Sapria himalayana HOM05D001544 ORTHO05D002732 8.3e-23 112.8 91 69.2
Sabra16G0010400 Salix brachista HOM05D005493 ORTHO05D007154 1.4e-22 112.1 120 50.0
AagrBONN_evm.TU.Sc2ySwM_362.2751 Anthoceros agrestis HOM05D005493 ORTHO05D007154 1.9e-22 111.7 92 51.1
SHI04515 Sapria himalayana HOM05D012376 ORTHO05D002750 3.2e-22 110.9 110 61.8
SHI19079 Sapria himalayana HOM05D004162 ORTHO05D004543 3.2e-22 110.9 67 83.6
SHI23379 Sapria himalayana HOM05D000105 ORTHO05D000023 3.2e-22 110.9 62 85.5
MCO13G503 Micromonas commoda HOM05D005493 ORTHO05D007154 5.4e-22 110.2 126 42.9
SHI22474 Sapria himalayana HOM05D004374 ORTHO05D005430 1.7e-20 105.1 82 69.5
SHI26680 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-20 105.1 59 86.4
SHI24815 Sapria himalayana HOM05D005129 ORTHO05D005585 2.3e-20 104.8 81 70.4
SHI26413 Sapria himalayana HOM05D000002 ORTHO05D000001 7.3e-19 99.8 78 67.9
SHI08665 Sapria himalayana HOM05D000004 ORTHO05D009727 2.1e-18 98.2 93 65.6
SHI16653 Sapria himalayana HOM05D012376 ORTHO05D009727 8.1e-18 96.3 87 64.4
Zm00001eb264500 Zea mays HOM05D005493 ORTHO05D007154 2.3e-17 94.7 77 61.0
SHI27519 Sapria himalayana HOM05D004808 ORTHO05D005279 3.1e-17 94.4 69 72.5
Zm00001eb070580 Zea mays HOM05D005493 ORTHO05D007154 5.2e-17 93.6 58 75.9
SHI03833 Sapria himalayana HOM05D000002 ORTHO05D000001 6.8e-17 93.2 90 63.3
Cre06.g278500 Chlamydomonas reinhardtii HOM05D005493 ORTHO05D007154 8.9e-17 92.8 146 34.2
SHI32816 Sapria himalayana HOM05D000105 ORTHO05D000023 1.3e-15 89.0 67 74.6
CBR_g1099 Chara braunii HOM05D000019 ORTHO05D000002 3.7e-15 87.4 113 36.3
SHI29807 Sapria himalayana HOM05D012376 ORTHO05D000014 6.4e-15 86.7 88 59.1
SHI11823 Sapria himalayana HOM05D000023 ORTHO05D000014 4.1e-14 84.0 76 64.5
SHI11405 Sapria himalayana HOM05D004750 ORTHO05D005598 1.2e-13 82.4 77 55.8
SHI23047 Sapria himalayana HOM05D012376 ORTHO05D003975 1.2e-13 82.4 50 80.0
PRCOL_00000725 Prasinoderma coloniale HOM05D005493 ORTHO05D007154 2.7e-13 81.3 144 29.9
SHI22361 Sapria himalayana HOM05D005583 ORTHO05D006507 2.7e-13 81.3 66 63.6
SHI07507 Sapria himalayana HOM05D001115 ORTHO05D001023 5.1e-12 77.0 48 77.1
SHI31778 Sapria himalayana HOM05D007056 ORTHO05D008278 8.6e-12 76.3 147 42.9
SHI18801 Sapria himalayana HOM05D000805 ORTHO05D000624 3.3e-11 74.3 49 73.5
SHI20242 Sapria himalayana HOM05D000002 ORTHO05D000001 3.3e-11 74.3 55 69.1
SHI04984 Sapria himalayana HOM05D004750 ORTHO05D006655 5.6e-11 73.6 110 44.5
SHI00122 Sapria himalayana HOM05D007925 ORTHO05D009727 7.3e-11 73.2 90 55.6
SHI06747 Sapria himalayana HOM05D012376 ORTHO05D006507 9.5e-11 72.8 74 58.1
SHI18890 Sapria himalayana HOM05D001061 ORTHO05D006881 9.5e-11 72.8 74 56.8
SHI01022 Sapria himalayana HOM05D006138 ORTHO05D007778 1.2e-10 72.4 55 76.4
SHI28122 Sapria himalayana HOM05D012376 ORTHO05D006507 2.1e-10 71.6 52 69.2
SHI27055 Sapria himalayana HOM05D004750 ORTHO05D006207 1.8e-09 68.6 66 59.1
SHI26606 Sapria himalayana HOM05D002759 ORTHO05D003290 2.3e-09 68.2 66 56.1
SHI02583 Sapria himalayana HOM05D008681 ORTHO05D006881 3.1e-09 67.8 61 63.9
SHI30105 Sapria himalayana HOM05D004750 ORTHO05D006207 3.1e-09 67.8 118 43.2
SHI08441 Sapria himalayana HOM05D012376 ORTHO05D003290 6.8e-09 66.6 38 81.6
SHI13676 Sapria himalayana HOM05D005239 ORTHO05D006698 6.8e-09 66.6 140 37.1
SHI21104 Sapria himalayana HOM05D001130 ORTHO05D001052 6.8e-09 66.6 85 50.6
SHI08332 Sapria himalayana HOM05D001905 ORTHO05D001820 8.9e-09 66.2 49 67.3
SHI04115 Sapria himalayana HOM05D000512 ORTHO05D000861 2.0e-08 65.1 72 51.4
SHI14628 Sapria himalayana HOM05D000105 ORTHO05D000023 3.4e-08 64.3 50 66.0
SHI08279 Sapria himalayana HOM05D004333 ORTHO05D005363 4.4e-08 63.9 88 47.7
SHI15014 Sapria himalayana HOM05D002608 ORTHO05D003838 4.4e-08 63.9 57 64.9
SHI19218 Sapria himalayana HOM05D004875 ORTHO05D005598 4.4e-08 63.9 62 58.1
SHI06474 Sapria himalayana HOM05D001167 ORTHO05D001054 1.7e-07 62.0 40 72.5
SHI27837 Sapria himalayana HOM05D002585 ORTHO05D002917 1.7e-07 62.0 39 76.9
SHI03814 Sapria himalayana HOM05D000002 ORTHO05D000001 2.2e-07 61.6 50 62.0
SHI33201 Sapria himalayana HOM05D000175 ORTHO05D004574 2.2e-07 61.6 65 49.2
SHI31132 Sapria himalayana HOM05D012376 ORTHO05D006881 6.4e-07 60.1 43 60.5
SHI31150 Sapria himalayana HOM05D002628 ORTHO05D002785 8.4e-07 59.7 33 87.9
SHI03437 Sapria himalayana HOM05D004750 ORTHO05D005598 1.1e-06 59.3 52 65.4
Cre10.g456851 Chlamydomonas reinhardtii HOM05D005493 ORTHO05D007154 2.4e-06 58.2 111 28.8
SHI10134 Sapria himalayana HOM05D006200 ORTHO05D007569 2.4e-06 58.2 56 57.1
SHI33974 Sapria himalayana HOM05D006955 ORTHO05D008701 2.4e-06 58.2 40 70.0
SHI15302 Sapria himalayana HOM05D002567 ORTHO05D006538 9.2e-06 56.2 40 65.0


User provided reference genes

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