Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI10786 Sapria himalayana HOM05D006654 ORTHO05D008201 2.1e-70 268.9 129 100.0
SGA_v2.0_scaffold161G37776 Striga asiatica HOM05D006654 ORTHO05D008201 3.8e-32 141.7 90 76.7
Migut.I00498 Erythranthe guttata HOM05D006654 ORTHO05D008201 2.5e-31 139.0 90 74.4
Oeu023486.1 Olea europaea HOM05D006654 ORTHO05D008201 3.2e-31 138.7 90 74.4
CSS0035351 Camellia sinensis var. sinensis HOM05D006654 ORTHO05D008201 9.5e-31 137.1 90 72.2
Oeu044257.1 Olea europaea HOM05D006654 ORTHO05D008201 9.5e-31 137.1 90 72.2
Rhsim12G0173900 Rhododendron simsii HOM05D006654 ORTHO05D008201 1.2e-30 136.7 90 71.1
Potri.012G096500 Populus trichocarpa HOM05D006654 ORTHO05D008201 1.6e-30 136.3 110 60.9
Cpa.g.sc13.133 Carica papaya HOM05D006654 ORTHO05D008201 2.1e-30 136.0 90 73.3
CiPaw.12G042200 Carya illinoinensis HOM05D006654 ORTHO05D008201 2.1e-30 136.0 90 70.0
ClCG03G003720 Citrullus lanatus HOM05D006654 ORTHO05D008201 2.1e-30 136.0 90 70.0
CsaV3_1G009610 Cucumis sativus L. HOM05D006654 ORTHO05D008201 2.1e-30 136.0 90 70.0
Potri.015G094300 Populus trichocarpa HOM05D006654 ORTHO05D008201 2.8e-30 135.6 110 61.8
Gohir.A03G052100 Gossypium hirsutum HOM05D006654 ORTHO05D008201 3.6e-30 135.2 90 73.3
Gorai.003G121200 Gossypium raimondii HOM05D006654 ORTHO05D008201 3.6e-30 135.2 90 73.3
Thecc.03G127500 Theobroma cacao HOM05D006654 ORTHO05D008201 3.6e-30 135.2 90 73.3
Actinidia08864 Actinidia chinensis HOM05D006654 ORTHO05D008201 4.7e-30 134.8 90 72.2
vmacro16672 Vaccinium macrocarpon HOM05D006654 ORTHO05D008201 4.7e-30 134.8 90 70.0
Haze_07229 Corylus avellana HOM05D006654 ORTHO05D008201 6.1e-30 134.4 90 68.9
ECA232G0809 Erigeron canadensis HOM05D006654 ORTHO05D008201 6.1e-30 134.4 90 71.1
Manes.14G052100 Manihot esculenta HOM05D006654 ORTHO05D008201 6.1e-30 134.4 90 71.1
AUR62029635 Chenopodium quinoa HOM05D006654 ORTHO05D008201 8.0e-30 134.0 90 72.2
Manes.06G118600 Manihot esculenta HOM05D006654 ORTHO05D008201 8.0e-30 134.0 90 70.0
EL10As4g23406 Beta vulgaris HOM05D006654 ORTHO05D008201 1.0e-29 133.7 90 71.1
Hma1.2p1_0014F.1_g009560 Hydrangea macrophylla HOM05D006654 ORTHO05D008201 1.0e-29 133.7 90 70.0
Hma1.2p1_0014F.1_g009570 Hydrangea macrophylla HOM05D006654 ORTHO05D008201 1.0e-29 133.7 90 70.0
Dinv11162 Davidia involucrata HOM05D006654 ORTHO05D008201 1.4e-29 133.3 90 73.3
Aa31LG1G18600 Aethionema arabicum HOM05D006654 ORTHO05D008201 1.8e-29 132.9 90 70.0
TWI23G1026 Tripterygium wilfordii HOM05D006654 ORTHO05D008201 1.8e-29 132.9 90 71.1
AT5G63440 Arabidopsis thaliana HOM05D006654 ORTHO05D008201 2.3e-29 132.5 90 71.1
Carub.0008s2414 Capsella rubella HOM05D006654 ORTHO05D008201 2.3e-29 132.5 90 71.1
Atru.BG.190.p Acer truncatum HOM05D006654 ORTHO05D008201 3.0e-29 132.1 90 68.9
Lsat_1_v5_gn_4_76920 Lactuca sativa HOM05D006654 ORTHO05D008201 3.0e-29 132.1 90 68.9
QL10p003811 Quercus lobata HOM05D006654 ORTHO05D008201 3.0e-29 132.1 90 70.0
CANSAT80G1342 Cannabis sativa HOM05D006654 ORTHO05D008201 4.0e-29 131.7 90 70.0
Sc10g0010430 Simmondsia chinensis HOM05D006654 ORTHO05D008201 4.0e-29 131.7 90 70.0
TAR371G0211 Trochodendron aralioides HOM05D006654 ORTHO05D008201 4.0e-29 131.7 90 70.0
Sp2g26520 Schrenkiella parvula HOM05D006654 ORTHO05D008201 5.2e-29 131.3 90 70.0
Aqoxy5G03402 Aquilegia oxysepala HOM05D006654 ORTHO05D008201 6.8e-29 131.0 90 70.0
AL8G40500 Arabidopsis lyrata HOM05D006654 ORTHO05D008201 6.8e-29 131.0 90 70.0
Nn4g22349 Nelumbo nucifera HOM05D006654 ORTHO05D008201 6.8e-29 131.0 90 70.0
RcHm_v2.0_Chr1g0314831 Rosa chinensis HOM05D006654 ORTHO05D008201 6.8e-29 131.0 90 71.1
HPP92_000346 Vanilla planifolia HOM05D006654 ORTHO05D008201 6.8e-29 131.0 90 70.0
MELO3C002357.2 Cucumis melo HOM05D006654 ORTHO05D008201 8.8e-29 130.6 85 70.6
BcaC01g02588 Brassica carinata HOM05D006654 ORTHO05D008201 1.2e-28 130.2 90 67.8
Gohir.D03G115000 Gossypium hirsutum HOM05D006654 ORTHO05D008201 1.2e-28 130.2 87 73.6
MD02G1316100 Malus domestica HOM05D006654 ORTHO05D008201 1.2e-28 130.2 90 71.1
Thhalv10004858m.g Eutrema salsugineum HOM05D006654 ORTHO05D008201 1.5e-28 129.8 90 68.9
FAN01G0962 Fragaria x ananassa HOM05D006654 ORTHO05D008201 1.5e-28 129.8 90 70.0
FAN06G4528 Fragaria x ananassa HOM05D006654 ORTHO05D008201 1.5e-28 129.8 90 70.0
Nn3g16497 Nelumbo nucifera HOM05D006654 ORTHO05D008201 1.5e-28 129.8 88 70.5
Duzib068G1280 Durio zibethinus HOM05D006654 ORTHO05D008201 2.0e-28 129.4 88 70.5
HanXRQChr16g0497681 Helianthus annuus HOM05D006654 ORTHO05D008201 2.0e-28 129.4 91 70.3
MBI07_g34629_MAGBIO Magnolia biondii HOM05D006654 ORTHO05D008201 2.6e-28 129.0 90 67.8
MD07G1005800 Malus domestica HOM05D006654 ORTHO05D008201 2.6e-28 129.0 90 70.0
PGR083G1205 Punica granatum HOM05D006654 ORTHO05D008201 2.6e-28 129.0 90 68.9
GSVIVG01008527001 Vitis vinifera HOM05D006654 ORTHO05D008201 2.6e-28 129.0 90 67.8
FAN01G2458 Fragaria x ananassa HOM05D006654 ORTHO05D008201 3.4e-28 128.6 90 68.9
FAN03G1885 Fragaria x ananassa HOM05D006654 ORTHO05D008201 3.4e-28 128.6 90 68.9
Lj9A478G90 Lonicera japonica HOM05D006654 ORTHO05D008201 3.4e-28 128.6 84 72.6
Prupe.4G287600 Prunus persica HOM05D006654 ORTHO05D008201 3.4e-28 128.6 90 70.0
arahy.Tifrunner.gnm1.ann1.653AWM Arachis hypogaea HOM05D006654 ORTHO05D008201 4.4e-28 128.3 90 65.6
arahy.Tifrunner.gnm1.ann1.S79YT6 Arachis hypogaea HOM05D006654 ORTHO05D008201 4.4e-28 128.3 90 65.6
Eucgr.F01379 Eucalyptus grandis HOM05D006654 ORTHO05D008201 4.4e-28 128.3 90 67.8
FvH4_7g00630 Fragaria vesca HOM05D006654 ORTHO05D008201 4.4e-28 128.3 90 68.9
CAN.G352.15 Capsicum annuum HOM05D006654 ORTHO05D008201 5.7e-28 127.9 90 70.0
Ciclev10021838m.g Citrus clementina HOM05D006654 ORTHO05D008201 5.7e-28 127.9 85 70.6
FAN10G2487 Fragaria x ananassa HOM05D006654 ORTHO05D008201 5.7e-28 127.9 90 68.9
Peaxi162Scf00089g00632 Petunia axillaris HOM05D006654 ORTHO05D008201 5.7e-28 127.9 90 70.0
Solyc03g111330.4 Solanum lycopersicum HOM05D006654 ORTHO05D008201 5.7e-28 127.9 90 70.0
Sopen03g030460 Solanum pennellii HOM05D006654 ORTHO05D008201 5.7e-28 127.9 90 70.0
PGSC0003DMG402015240 Solanum tuberosum HOM05D006654 ORTHO05D008201 5.7e-28 127.9 90 70.0
Cc04_g10050 Coffea canephora HOM05D006654 ORTHO05D008201 7.5e-28 127.5 90 68.9
Mapoly0061s0139 Marchantia polymorpha HOM05D006654 ORTHO05D008201 7.5e-28 127.5 90 65.6
COL.COLO4_28092 Corchorus olitorius HOM05D006654 ORTHO05D008201 9.8e-28 127.1 84 72.6
Glyma.20G249100 Glycine max HOM05D006654 ORTHO05D008201 9.8e-28 127.1 90 65.6
Sed0016483 Sechium edule HOM05D006654 ORTHO05D008201 9.8e-28 127.1 84 69.0
CARHR277290 Cardamine hirsuta HOM05D006654 ORTHO05D008201 1.3e-27 126.7 90 66.7
Nitab4.5_0003282g0120 Nicotiana tabacum HOM05D006654 ORTHO05D008201 1.3e-27 126.7 90 68.9
Nitab4.5_0004750g0080 Nicotiana tabacum HOM05D006654 ORTHO05D008201 1.3e-27 126.7 90 68.9
Os07g0295200 Oryza sativa ssp. japonica HOM05D006654 ORTHO05D008201 1.3e-27 126.7 89 67.4
THA.LOC104818189 Tarenaya hassleriana HOM05D006654 ORTHO05D008201 1.7e-27 126.3 90 65.6
C03p63160 Brassica napus HOM05D001045 ORTHO05D004836 2.2e-27 125.9 85 69.4
BolC3t18571H Brassica oleracea HOM05D001045 ORTHO05D004836 2.2e-27 125.9 85 69.4
CDE05G1175 Ceratophyllum demersum HOM05D006654 ORTHO05D008201 2.2e-27 125.9 90 64.4
A06p30050 Brassica napus HOM05D001045 ORTHO05D004836 2.8e-27 125.6 85 69.4
BraA06t25957Z Brassica rapa HOM05D001045 ORTHO05D004836 2.8e-27 125.6 85 69.4
Sabra15G0115700 Salix brachista HOM05D006654 ORTHO05D008201 2.8e-27 125.6 108 59.3
Zm00001eb305410 Zea mays HOM05D006654 ORTHO05D008201 2.8e-27 125.6 89 65.2
SEGI_01164 Sequoiadendron giganteum HOM05D006654 ORTHO05D008201 3.7e-27 125.2 90 66.7
CBR_g21852 Chara braunii HOM05D006654 ORTHO05D008201 2.4e-26 122.5 90 63.3
Phvul.007G001300 Phaseolus vulgaris HOM05D006654 ORTHO05D008201 3.1e-26 122.1 90 64.4
VMungo0720G2310 Vigna mungo HOM05D006654 ORTHO05D008201 3.1e-26 122.1 90 64.4
Prupe.1G190000 Prunus persica HOM05D006654 ORTHO05D008201 5.4e-26 121.3 84 70.2
PSO063G4350 Papaver somniferum HOM05D006654 ORTHO05D008201 7.0e-26 120.9 90 63.3
PSO782G1240 Papaver somniferum HOM05D006654 ORTHO05D008201 7.0e-26 120.9 90 63.3
AagrBONN_evm.TU.Sc2ySwM_228.2755 Anthoceros agrestis HOM05D006654 ORTHO05D008201 1.2e-25 120.2 90 63.3
SMO364G0616 Selaginella moellendorffii HOM05D006654 ORTHO05D008201 1.2e-25 120.2 90 60.0
Pp3c22_11190 Physcomitrium patens HOM05D006654 ORTHO05D008201 2.7e-25 119.0 90 63.3
Pp3c22_11201 Physcomitrium patens HOM05D006654 ORTHO05D008201 2.7e-25 119.0 90 63.3
TPR.G39480 Trifolium pratense HOM05D006654 ORTHO05D008201 2.7e-25 119.0 90 61.1
ATR0561G261 Amborella trichopoda HOM05D006654 ORTHO05D008201 3.5e-25 118.6 90 63.3
Ca_11428_v3 Cicer arietinum L. HOM05D006654 ORTHO05D008201 5.9e-25 117.9 90 60.0
Lj5g0001059 Lotus japonicus HOM05D006654 ORTHO05D008201 1.0e-24 117.1 90 60.0
Medtr1g117000 Medicago truncatula HOM05D001235 ORTHO05D005684 1.0e-24 117.1 90 60.0
Psat6g243960 Pisum sativum HOM05D006654 ORTHO05D008201 1.3e-24 116.7 90 58.9
Pp3c18_15000 Physcomitrium patens HOM05D006654 ORTHO05D008201 1.9e-23 112.8 90 62.2
Ca_29862_v3 Cicer arietinum L. HOM05D006654 ORTHO05D008201 9.5e-23 110.5 84 59.5
Hund10171 Selenicereus undatus HOM05D006654 ORTHO05D008201 1.2e-12 77.0 85 54.1
CAN.G1225.1 Capsicum annuum HOM05D003952 ORTHO05D008201 7.0e-10 67.8 48 68.8
MSTRG.4601 Avicennia marina HOM05D006654 ORTHO05D008201 1.2e-09 67.0 41 78.0
AUR62025924 Chenopodium quinoa HOM05D006654 ORTHO05D008201 4.6e-09 65.1 41 73.2
Lalb_Chr06g0164681 Lupinus albus HOM05D006654 ORTHO05D008201 3.0e-08 62.4 46 60.9
LjContig00075g0008356 Lotus japonicus HOM05D006654 ORTHO05D008201 3.9e-08 62.0 82 43.9
RcHm_v2.0_Chr7g0215371 Rosa chinensis HOM05D006654 ORTHO05D008201 4.7e-06 55.1 41 58.5


User provided reference genes

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