Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI09230 Sapria himalayana HOM05D000966 ORTHO05D004359 2.9e-157 558.5 281 100.0
Sabra05G0138100 Salix brachista HOM05D000966 ORTHO05D004359 1.9e-20 104.0 81 59.3
Potri.005G182100 Populus trichocarpa HOM05D000966 ORTHO05D004359 1.3e-19 101.3 81 60.5
Manes.18G082550 Manihot esculenta HOM05D000966 ORTHO05D004359 1.6e-19 100.9 81 61.7
Potri.002G079100 Populus trichocarpa HOM05D000966 ORTHO05D004359 1.6e-19 100.9 81 60.5
Manes.02G168600 Manihot esculenta HOM05D000966 ORTHO05D004359 4.0e-18 96.3 81 59.3
arahy.Tifrunner.gnm1.ann1.P7B6WW Arachis hypogaea HOM05D000966 ORTHO05D004359 2.2e-16 90.5 80 53.8
arahy.Tifrunner.gnm1.ann1.Z22D2G Arachis hypogaea HOM05D000966 ORTHO05D004359 2.2e-16 90.5 80 55.0
Lalb_Chr08g0241061 Lupinus albus HOM05D000966 ORTHO05D004359 2.2e-16 90.5 87 54.0
Lalb_Chr23g0271181 Lupinus albus HOM05D000966 ORTHO05D004359 4.9e-16 89.4 80 56.2
TWI32G0333 Tripterygium wilfordii HOM05D000966 ORTHO05D004359 1.1e-15 88.2 80 55.0
Lj7A351G47 Lonicera japonica HOM05D000966 ORTHO05D004359 2.4e-15 87.0 89 50.6
Dinv27269 Davidia involucrata HOM05D000966 ORTHO05D004359 7.1e-15 85.5 83 57.8
TWI60G1172 Tripterygium wilfordii HOM05D000966 ORTHO05D004359 7.1e-15 85.5 80 55.0
Duzib041G0231 Durio zibethinus HOM05D000966 ORTHO05D004359 2.1e-14 84.0 84 57.1
Medtr3g088625 Medicago truncatula HOM05D000966 ORTHO05D004359 2.1e-14 84.0 82 52.4
TPR.G21850 Trifolium pratense HOM05D000966 ORTHO05D004359 2.7e-14 83.6 82 52.4
CSS0042459 Camellia sinensis var. sinensis HOM05D000966 ORTHO05D004359 3.5e-14 83.2 82 54.9
Ca_16610_v3 Cicer arietinum L. HOM05D000966 ORTHO05D004359 3.5e-14 83.2 82 53.7
Gohir.A02G070700 Gossypium hirsutum HOM05D000966 ORTHO05D004359 3.5e-14 83.2 84 56.0
Gohir.D02G077900 Gossypium hirsutum HOM05D000966 ORTHO05D004359 3.5e-14 83.2 84 56.0
Gorai.005G087500 Gossypium raimondii HOM05D000966 ORTHO05D004359 3.5e-14 83.2 84 56.0
Lj1g0026196 Lotus japonicus HOM05D000966 ORTHO05D004359 3.5e-14 83.2 82 51.2
Lalb_Chr11g0066181 Lupinus albus HOM05D000966 ORTHO05D004359 3.5e-14 83.2 80 53.8
Hma1.2p1_0880F.1_g231805 Hydrangea macrophylla HOM05D000966 ORTHO05D004359 7.9e-14 82.0 83 54.2
DCAR_014368 Daucus carota HOM05D000966 ORTHO05D004359 1.0e-13 81.6 93 51.6
Glyma.06G117700 Glycine max HOM05D000966 ORTHO05D004359 1.3e-13 81.3 82 51.2
TAR381G1211 Trochodendron aralioides HOM05D000966 ORTHO05D004359 1.3e-13 81.3 82 54.9
VMungo1309G2033 Vigna mungo HOM05D000966 ORTHO05D004359 1.3e-13 81.3 82 51.2
Dinv14693 Davidia involucrata HOM05D000966 ORTHO05D004359 1.8e-13 80.9 83 53.0
SalBow2G0813 Salvia bowleyana HOM05D000966 ORTHO05D004359 1.8e-13 80.9 80 53.8
Glyma.04G245400 Glycine max HOM05D000966 ORTHO05D004359 2.3e-13 80.5 82 51.2
Eucgr.F03851 Eucalyptus grandis HOM05D000966 ORTHO05D004359 3.0e-13 80.1 83 55.4
Nn5g28439 Nelumbo nucifera HOM05D000966 ORTHO05D004359 3.0e-13 80.1 82 52.4
Phvul.009G130100 Phaseolus vulgaris HOM05D000966 ORTHO05D004359 3.0e-13 80.1 82 50.0
Gohir.A05G238000 Gossypium hirsutum HOM05D000966 ORTHO05D004359 3.9e-13 79.7 84 52.4
MBI03_g13487_MAGBIO Magnolia biondii HOM05D000966 ORTHO05D004359 3.9e-13 79.7 82 53.7
GSVIVG01008805001 Vitis vinifera HOM05D000966 ORTHO05D004359 3.9e-13 79.7 83 53.0
CiPaw.15G031200 Carya illinoinensis HOM05D000966 ORTHO05D004359 5.1e-13 79.3 82 51.2
Gohir.D05G240000 Gossypium hirsutum HOM05D000966 ORTHO05D004359 5.1e-13 79.3 84 53.6
Gorai.009G248900 Gossypium raimondii HOM05D000966 ORTHO05D004359 5.1e-13 79.3 84 53.6
CiPaw.16G022600 Carya illinoinensis HOM05D000966 ORTHO05D004359 6.7e-13 79.0 82 52.4
PSO017G4997 Papaver somniferum HOM05D000966 ORTHO05D004359 6.7e-13 79.0 82 51.2
PSO170G5191 Papaver somniferum HOM05D000966 ORTHO05D004359 6.7e-13 79.0 82 51.2
Duzib093G1496 Durio zibethinus HOM05D000966 ORTHO05D004359 8.7e-13 78.6 84 52.4
Sed0009206 Sechium edule HOM05D000966 ORTHO05D004359 8.7e-13 78.6 88 52.3
Haze_17638 Corylus avellana HOM05D000966 ORTHO05D004359 1.1e-12 78.2 89 49.4
TWI34G1216 Tripterygium wilfordii HOM05D000966 ORTHO05D004359 1.1e-12 78.2 80 52.5
MD15G1133700 Malus domestica HOM05D000966 ORTHO05D004359 1.5e-12 77.8 81 53.1
Thecc.08G133300 Theobroma cacao HOM05D000966 ORTHO05D004359 1.5e-12 77.8 84 52.4
QL09p032394 Quercus lobata HOM05D000966 ORTHO05D004359 1.9e-12 77.4 82 51.2
Atru.chr13.1574 Acer truncatum HOM05D000966 ORTHO05D004359 2.5e-12 77.0 84 47.6
Zm00001eb243610 Zea mays HOM05D000966 ORTHO05D004359 2.5e-12 77.0 79 51.9
MD08G1159600 Malus domestica HOM05D000966 ORTHO05D004359 3.3e-12 76.6 82 53.7
Nitab4.5_0003978g0030 Nicotiana tabacum HOM05D000966 ORTHO05D004359 3.3e-12 76.6 84 48.8
Psat5g084600 Pisum sativum HOM05D000966 ORTHO05D004359 3.3e-12 76.6 82 51.2
PGR042G2231 Punica granatum HOM05D000966 ORTHO05D004359 3.3e-12 76.6 83 51.8
SGA_v2.0_scaffold25G11140 Striga asiatica HOM05D000966 ORTHO05D004359 3.3e-12 76.6 81 50.6
MELO3C008475.2 Cucumis melo HOM05D000966 ORTHO05D004359 5.6e-12 75.9 98 46.9
ATR0584G046 Amborella trichopoda HOM05D000966 ORTHO05D004359 7.4e-12 75.5 82 52.4
MSTRG.1411 Avicennia marina HOM05D000966 ORTHO05D004359 7.4e-12 75.5 80 50.0
Cpa.g.sc26.315 Carica papaya HOM05D000966 ORTHO05D004359 7.4e-12 75.5 85 49.4
Ciclev10000005m.g Citrus clementina HOM05D000966 ORTHO05D004359 7.4e-12 75.5 81 50.6
COL.COLO4_36773 Corchorus olitorius HOM05D000966 ORTHO05D004359 7.4e-12 75.5 92 48.9
DCAR_016658 Daucus carota HOM05D000966 ORTHO05D004359 7.4e-12 75.5 85 50.6
TAR625G0972 Trochodendron aralioides HOM05D000966 ORTHO05D004359 7.4e-12 75.5 82 52.4
ClCG08G006030 Citrullus lanatus HOM05D000966 ORTHO05D004359 9.6e-12 75.1 88 51.1
Nitab4.5_0000317g0220 Nicotiana tabacum HOM05D000966 ORTHO05D004359 9.6e-12 75.1 98 43.9
Prupe.1G489300 Prunus persica HOM05D000966 ORTHO05D004359 9.6e-12 75.1 82 52.4
Sed0004584 Sechium edule HOM05D000966 ORTHO05D004359 9.6e-12 75.1 88 51.1
Actinidia21275 Actinidia chinensis HOM05D000966 ORTHO05D004359 1.3e-11 74.7 82 51.2
SGA_v2.0_scaffold28G11969 Striga asiatica HOM05D000966 ORTHO05D004359 1.3e-11 74.7 80 51.2
Oeu040397.2 Olea europaea HOM05D000966 ORTHO05D004359 1.6e-11 74.3 83 51.8
SalBow7G0355 Salvia bowleyana HOM05D000966 ORTHO05D004359 2.1e-11 73.9 80 51.2
SalBow7G2771 Salvia bowleyana HOM05D000966 ORTHO05D004359 2.1e-11 73.9 80 51.2
Cfa018425 Carpinus fangiana HOM05D000966 ORTHO05D004359 2.8e-11 73.6 82 48.8
Cc10_g13740 Coffea canephora HOM05D000966 ORTHO05D004359 2.8e-11 73.6 83 49.4
ECA246G3937 Erigeron canadensis HOM05D000966 ORTHO05D004359 2.8e-11 73.6 83 48.2
COL.COLO4_35487 Corchorus olitorius HOM05D000966 ORTHO05D004359 3.7e-11 73.2 84 52.4
RcHm_v2.0_Chr6g0296741 Rosa chinensis HOM05D000966 ORTHO05D004359 3.7e-11 73.2 82 50.0
Ah.05g169110 Amaranthus hybridus HOM05D000966 ORTHO05D004359 4.8e-11 72.8 80 50.0
CsaV3_6G034050 Cucumis sativus L. HOM05D000966 ORTHO05D004359 4.8e-11 72.8 86 50.0
Sc26g0002860 Simmondsia chinensis HOM05D000966 ORTHO05D004359 4.8e-11 72.8 82 51.2
Actinidia15211 Actinidia chinensis HOM05D000966 ORTHO05D004359 6.2e-11 72.4 82 50.0
AUR62013429 Chenopodium quinoa HOM05D000966 ORTHO05D004359 6.2e-11 72.4 80 48.8
FAN15G1688 Fragaria x ananassa HOM05D000966 ORTHO05D004359 6.2e-11 72.4 82 48.8
FAN20G2668 Fragaria x ananassa HOM05D000966 ORTHO05D004359 6.2e-11 72.4 82 48.8
FAN27G3367 Fragaria x ananassa HOM05D000966 ORTHO05D004359 6.2e-11 72.4 82 48.8
Nn1g08953 Nelumbo nucifera HOM05D000966 ORTHO05D004359 6.2e-11 72.4 80 52.5
Hund26773 Selenicereus undatus HOM05D000966 ORTHO05D004359 6.2e-11 72.4 83 51.8
CSS0026263 Camellia sinensis var. sinensis HOM05D000966 ORTHO05D004359 8.1e-11 72.0 78 51.3
Peaxi162Scf00066g00223 Petunia axillaris HOM05D000966 ORTHO05D004359 8.1e-11 72.0 83 49.4
Solyc04g057880.3 Solanum lycopersicum HOM05D000966 ORTHO05D004359 8.1e-11 72.0 82 47.6
Sopen04g025730 Solanum pennellii HOM05D000966 ORTHO05D004359 8.1e-11 72.0 82 47.6
FvH4_2g27880 Fragaria vesca HOM05D000966 ORTHO05D004359 1.1e-10 71.6 82 48.8
FAN24G3136 Fragaria x ananassa HOM05D000966 ORTHO05D004359 1.1e-10 71.6 82 48.8
THA.LOC104812082 Tarenaya hassleriana HOM05D000966 ORTHO05D004359 1.1e-10 71.6 85 50.6
Aqoxy5G02416 Aquilegia oxysepala HOM05D000966 ORTHO05D004359 1.4e-10 71.2 82 50.0
CANSAT25G2222 Cannabis sativa HOM05D000966 ORTHO05D004359 1.4e-10 71.2 83 49.4
CARHR070780 Cardamine hirsuta HOM05D000966 ORTHO05D004359 1.4e-10 71.2 84 50.0
CAN.G716.14 Capsicum annuum HOM05D000966 ORTHO05D004359 1.8e-10 70.9 82 47.6
Solyc06g059960.4 Solanum lycopersicum HOM05D000966 ORTHO05D004359 1.8e-10 70.9 83 47.0
Sopen06g020060 Solanum pennellii HOM05D000966 ORTHO05D004359 1.8e-10 70.9 83 47.0
AUR62007714 Chenopodium quinoa HOM05D000966 ORTHO05D004359 2.4e-10 70.5 81 50.6
Migut.N03259 Erythranthe guttata HOM05D000966 ORTHO05D004359 2.4e-10 70.5 84 48.8
Lsat_1_v5_gn_6_110300 Lactuca sativa HOM05D000966 ORTHO05D004359 2.4e-10 70.5 83 45.8
Aa31LG4G7310 Aethionema arabicum HOM05D000966 ORTHO05D004359 3.1e-10 70.1 85 50.6
HanXRQChr05g0149781 Helianthus annuus HOM05D000966 ORTHO05D004359 3.1e-10 70.1 86 48.8
CDE02G1847 Ceratophyllum demersum HOM05D000966 ORTHO05D004359 5.3e-10 69.3 87 51.7
Rhsim06G0088400 Rhododendron simsii HOM05D000966 ORTHO05D004359 5.3e-10 69.3 83 48.2
SEGI_04625 Sequoiadendron giganteum HOM05D000966 ORTHO05D004359 6.9e-10 68.9 83 48.2
unitig_747.g21497 Utricularia gibba HOM05D000966 ORTHO05D004359 6.9e-10 68.9 81 46.9
Os02g0554000 Oryza sativa ssp. japonica HOM05D000966 ORTHO05D004359 9.0e-10 68.6 80 48.8
EL10Ac1g01359 Beta vulgaris HOM05D000966 ORTHO05D004359 2.0e-09 67.4 80 47.5
BraA07t31805Z Brassica rapa HOM05D000966 ORTHO05D004359 2.0e-09 67.4 85 47.1
A07p42840 Brassica napus HOM05D000966 ORTHO05D004359 2.6e-09 67.0 85 48.2
Carub.0002s2418 Capsella rubella HOM05D000966 ORTHO05D004359 4.5e-09 66.2 85 45.9
Nitab4.5_0005166g0010 Nicotiana tabacum HOM05D000966 ORTHO05D004359 4.5e-09 66.2 81 46.9
Peaxi162Scf00591g00715 Petunia axillaris HOM05D000966 ORTHO05D004359 5.8e-09 65.9 85 44.7
AT1G77300 Arabidopsis thaliana HOM05D000966 ORTHO05D004359 7.6e-09 65.5 85 45.9
CAN.G531.16 Capsicum annuum HOM05D000966 ORTHO05D004359 7.6e-09 65.5 82 43.9
AL2G37500 Arabidopsis lyrata HOM05D000966 ORTHO05D004359 9.9e-09 65.1 85 45.9
C06p51460 Brassica napus HOM05D000966 ORTHO05D004359 9.9e-09 65.1 85 47.1
BolC6t40164H Brassica oleracea HOM05D000966 ORTHO05D004359 9.9e-09 65.1 85 47.1
BcaB05g25036 Brassica carinata HOM05D000966 ORTHO05D004359 1.3e-08 64.7 85 49.4
Sp5g32470 Schrenkiella parvula HOM05D000966 ORTHO05D004359 1.7e-08 64.3 85 45.9
CANSAT56G0447 Cannabis sativa HOM05D000966 ORTHO05D004359 2.2e-08 63.9 81 45.7
CDE06G2822 Ceratophyllum demersum HOM05D000625 ORTHO05D004359 2.2e-08 63.9 88 46.6
Thhalv10017998m.g Eutrema salsugineum HOM05D000966 ORTHO05D004359 2.2e-08 63.9 87 43.7
CANSAT64G2451 Cannabis sativa HOM05D000966 ORTHO05D004359 8.4e-08 62.0 80 45.0
THA.LOC104809635 Tarenaya hassleriana HOM05D000966 ORTHO05D004359 2.4e-07 60.5 82 45.1
SEGI_29086 Sequoiadendron giganteum HOM05D000966 ORTHO05D004359 5.5e-07 59.3 84 39.3
THA.LOC104810214 Tarenaya hassleriana HOM05D000966 ORTHO05D004359 1.6e-06 57.8 87 42.5
HPP92_016112 Vanilla planifolia HOM05D000966 ORTHO05D004359 3.5e-06 56.6 80 36.2


User provided reference genes

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