Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI09224 Sapria himalayana HOM05D000966 ORTHO05D004359 4.3e-193 677.9 369 100.0
COL.COLO4_35487 Corchorus olitorius HOM05D000966 ORTHO05D004359 7.3e-44 182.2 278 42.4
GSVIVG01008805001 Vitis vinifera HOM05D000966 ORTHO05D004359 1.2e-41 174.9 278 38.8
COL.COLO4_36773 Corchorus olitorius HOM05D000966 ORTHO05D004359 4.4e-41 172.9 298 37.9
Duzib093G1496 Durio zibethinus HOM05D000966 ORTHO05D004359 4.4e-41 172.9 303 37.6
Thecc.08G133300 Theobroma cacao HOM05D000966 ORTHO05D004359 4.9e-40 169.5 318 36.2
Gohir.D05G240000 Gossypium hirsutum HOM05D000966 ORTHO05D004359 6.4e-40 169.1 328 37.5
Gorai.009G248900 Gossypium raimondii HOM05D000966 ORTHO05D004359 6.4e-40 169.1 328 37.5
Oeu015303.1 Olea europaea HOM05D000966 ORTHO05D004359 6.4e-40 169.1 296 39.9
CiPaw.16G022600 Carya illinoinensis HOM05D000966 ORTHO05D004359 1.1e-39 168.3 329 37.4
Potri.005G182100 Populus trichocarpa HOM05D000966 ORTHO05D004359 1.4e-39 167.9 429 33.8
Manes.02G168600 Manihot esculenta HOM05D000966 ORTHO05D004359 2.4e-39 167.2 335 36.7
MSTRG.1411 Avicennia marina HOM05D000966 ORTHO05D004359 5.4e-39 166.0 269 39.0
TWI32G0333 Tripterygium wilfordii HOM05D000966 ORTHO05D004359 1.6e-38 164.5 303 37.6
TWI34G1216 Tripterygium wilfordii HOM05D000966 ORTHO05D004359 1.6e-38 164.5 305 37.0
Sabra05G0138100 Salix brachista HOM05D000966 ORTHO05D004359 2.7e-38 163.7 428 32.9
Ca_16610_v3 Cicer arietinum L. HOM05D000966 ORTHO05D004359 3.5e-38 163.3 272 38.6
Gohir.A02G070700 Gossypium hirsutum HOM05D000966 ORTHO05D004359 6.0e-38 162.5 314 36.9
CSS0042459 Camellia sinensis var. sinensis HOM05D000966 ORTHO05D004359 1.0e-37 161.8 325 38.2
MD08G1159600 Malus domestica HOM05D000966 ORTHO05D004359 1.0e-37 161.8 394 31.7
Ciclev10000005m.g Citrus clementina HOM05D000966 ORTHO05D004359 1.3e-37 161.4 310 37.4
Potri.002G079100 Populus trichocarpa HOM05D000966 ORTHO05D004359 1.3e-37 161.4 346 35.0
arahy.Tifrunner.gnm1.ann1.P7B6WW Arachis hypogaea HOM05D000966 ORTHO05D004359 1.7e-37 161.0 270 39.6
arahy.Tifrunner.gnm1.ann1.Z22D2G Arachis hypogaea HOM05D000966 ORTHO05D004359 1.7e-37 161.0 267 40.8
Lalb_Chr11g0066181 Lupinus albus HOM05D000966 ORTHO05D004359 1.7e-37 161.0 283 38.2
Aa31LG4G7310 Aethionema arabicum HOM05D000966 ORTHO05D004359 8.7e-37 158.7 268 38.8
Manes.18G082550 Manihot esculenta HOM05D000966 ORTHO05D004359 1.1e-36 158.3 303 36.3
Gohir.D02G077900 Gossypium hirsutum HOM05D000966 ORTHO05D004359 1.9e-36 157.5 310 36.5
TWI60G1172 Tripterygium wilfordii HOM05D000966 ORTHO05D004359 4.3e-36 156.4 303 36.0
Cpa.g.sc26.315 Carica papaya HOM05D000966 ORTHO05D004359 5.6e-36 156.0 343 34.7
Gorai.005G087500 Gossypium raimondii HOM05D000966 ORTHO05D004359 5.6e-36 156.0 309 36.9
Sp5g32470 Schrenkiella parvula HOM05D000966 ORTHO05D004359 5.6e-36 156.0 272 41.2
Dinv14693 Davidia involucrata HOM05D000966 ORTHO05D004359 7.3e-36 155.6 330 34.8
Actinidia15211 Actinidia chinensis HOM05D000966 ORTHO05D004359 9.6e-36 155.2 311 33.8
Atru.chr13.1574 Acer truncatum HOM05D000966 ORTHO05D004359 1.6e-35 154.5 427 30.4
Actinidia21275 Actinidia chinensis HOM05D000966 ORTHO05D004359 1.6e-35 154.5 344 34.3
Lj1g0026196 Lotus japonicus HOM05D000966 ORTHO05D004359 1.6e-35 154.5 276 39.5
THA.LOC104810214 Tarenaya hassleriana HOM05D000966 ORTHO05D004359 1.6e-35 154.5 271 38.4
CiPaw.15G031200 Carya illinoinensis HOM05D000966 ORTHO05D004359 4.8e-35 152.9 332 36.1
Thhalv10017998m.g Eutrema salsugineum HOM05D000966 ORTHO05D004359 4.8e-35 152.9 272 39.7
AL2G37500 Arabidopsis lyrata HOM05D000966 ORTHO05D004359 2.4e-34 150.6 279 37.6
SGA_v2.0_scaffold28G11969 Striga asiatica HOM05D000966 ORTHO05D004359 5.3e-34 149.4 288 36.8
THA.LOC104812082 Tarenaya hassleriana HOM05D000966 ORTHO05D004359 5.3e-34 149.4 271 39.1
Glyma.06G117700 Glycine max HOM05D000966 ORTHO05D004359 6.9e-34 149.1 270 36.3
Sed0004584 Sechium edule HOM05D000966 ORTHO05D004359 1.5e-33 147.9 321 32.1
Lalb_Chr23g0271181 Lupinus albus HOM05D000966 ORTHO05D004359 2.0e-33 147.5 293 37.5
CARHR070780 Cardamine hirsuta HOM05D000966 ORTHO05D004359 2.6e-33 147.1 259 38.6
QL09p032370 Quercus lobata HOM05D000966 ORTHO05D004359 2.6e-33 147.1 431 31.1
RcHm_v2.0_Chr6g0296741 Rosa chinensis HOM05D000966 ORTHO05D004359 2.6e-33 147.1 403 31.8
ClCG08G006030 Citrullus lanatus HOM05D000966 ORTHO05D004359 5.8e-33 146.0 325 32.3
Phvul.009G130100 Phaseolus vulgaris HOM05D000966 ORTHO05D004359 7.6e-33 145.6 269 36.1
VMungo1309G2033 Vigna mungo HOM05D000966 ORTHO05D004359 7.6e-33 145.6 270 37.8
SalBow7G2771 Salvia bowleyana HOM05D000966 ORTHO05D004359 1.3e-32 144.8 273 37.0
Carub.0002s2418 Capsella rubella HOM05D000966 ORTHO05D004359 1.7e-32 144.4 272 38.6
CsaV3_6G034050 Cucumis sativus L. HOM05D000966 ORTHO05D004359 1.7e-32 144.4 325 33.5
FAN20G2668 Fragaria x ananassa HOM05D000966 ORTHO05D004359 1.7e-32 144.4 426 30.0
FAN15G1688 Fragaria x ananassa HOM05D000966 ORTHO05D004359 2.2e-32 144.1 424 29.7
Glyma.04G245400 Glycine max HOM05D000966 ORTHO05D004359 2.2e-32 144.1 269 36.4
Medtr3g088625 Medicago truncatula HOM05D000966 ORTHO05D004359 2.2e-32 144.1 378 31.0
Cfa018425 Carpinus fangiana HOM05D000966 ORTHO05D004359 3.8e-32 143.3 319 34.8
PGR042G2231 Punica granatum HOM05D000966 ORTHO05D004359 3.8e-32 143.3 380 32.9
SalBow7G0355 Salvia bowleyana HOM05D000966 ORTHO05D004359 3.8e-32 143.3 273 36.6
Solyc04g057880.3 Solanum lycopersicum HOM05D000966 ORTHO05D004359 3.8e-32 143.3 270 36.7
MELO3C008475.2 Cucumis melo HOM05D000966 ORTHO05D004359 4.9e-32 142.9 325 33.5
MD15G1133700 Malus domestica HOM05D000966 ORTHO05D004359 6.4e-32 142.5 317 33.8
AT1G77300 Arabidopsis thaliana HOM05D000966 ORTHO05D004359 8.4e-32 142.1 277 35.7
FAN24G3136 Fragaria x ananassa HOM05D000966 ORTHO05D004359 8.4e-32 142.1 424 29.7
FvH4_2g27880 Fragaria vesca HOM05D000966 ORTHO05D004359 1.1e-31 141.7 426 29.6
SalBow2G0813 Salvia bowleyana HOM05D000966 ORTHO05D004359 1.1e-31 141.7 307 33.9
TAR625G0972 Trochodendron aralioides HOM05D000966 ORTHO05D004359 1.9e-31 141.0 331 33.2
Haze_17638 Corylus avellana HOM05D000966 ORTHO05D004359 3.2e-31 140.2 353 33.7
Sopen04g025730 Solanum pennellii HOM05D000966 ORTHO05D004359 4.2e-31 139.8 269 36.4
Eucgr.F03851 Eucalyptus grandis HOM05D000966 ORTHO05D004359 5.4e-31 139.4 399 31.1
TPR.G21850 Trifolium pratense HOM05D000966 ORTHO05D004359 7.1e-31 139.0 274 35.4
Nn5g28439 Nelumbo nucifera HOM05D000966 ORTHO05D004359 2.1e-30 137.5 315 34.9
FAN27G3367 Fragaria x ananassa HOM05D000966 ORTHO05D004359 2.7e-30 137.1 426 29.3
Sed0009206 Sechium edule HOM05D000966 ORTHO05D004359 1.3e-29 134.8 327 32.7
Cc10_g13740 Coffea canephora HOM05D000966 ORTHO05D004359 1.8e-29 134.4 272 36.0
MBI03_g13487_MAGBIO Magnolia biondii HOM05D000966 ORTHO05D004359 2.3e-29 134.0 360 31.9
Oeu040396.1 Olea europaea HOM05D000966 ORTHO05D004359 3.0e-29 133.7 263 36.5
Oeu040397.2 Olea europaea HOM05D000966 ORTHO05D004359 3.0e-29 133.7 263 36.5
Lalb_Chr08g0241051 Lupinus albus HOM05D000966 ORTHO05D004359 3.9e-29 133.3 393 30.8
Peaxi162Scf00591g00715 Petunia axillaris HOM05D000966 ORTHO05D004359 6.7e-29 132.5 284 35.9
A07p42840 Brassica napus HOM05D000966 ORTHO05D004359 1.1e-28 131.7 265 35.8
BraA07t31805Z Brassica rapa HOM05D000966 ORTHO05D004359 1.1e-28 131.7 265 35.8
Peaxi162Scf00066g00223 Petunia axillaris HOM05D000966 ORTHO05D004359 1.5e-28 131.3 271 36.5
BcaB05g25036 Brassica carinata HOM05D000966 ORTHO05D004359 1.9e-28 131.0 270 36.3
TAR381G1211 Trochodendron aralioides HOM05D000966 ORTHO05D004359 1.9e-28 131.0 328 31.4
DCAR_014368 Daucus carota HOM05D000966 ORTHO05D004359 4.3e-28 129.8 446 29.1
Nitab4.5_0000418g0030 Nicotiana tabacum HOM05D000966 ORTHO05D004359 4.3e-28 129.8 281 33.8
C06p51460 Brassica napus HOM05D000966 ORTHO05D004359 7.4e-28 129.0 265 35.5
CANSAT25G2222 Cannabis sativa HOM05D000966 ORTHO05D004359 9.6e-28 128.6 446 29.6
BolC6t40164H Brassica oleracea HOM05D000966 ORTHO05D004359 1.3e-27 128.3 265 35.5
CANSAT56G0447 Cannabis sativa HOM05D000966 ORTHO05D004359 2.1e-27 127.5 278 34.2
Migut.N03259 Erythranthe guttata HOM05D000966 ORTHO05D004359 6.2e-27 125.9 275 34.5
Solyc06g059960.4 Solanum lycopersicum HOM05D000966 ORTHO05D004359 6.2e-27 125.9 304 33.9
CAN.G531.16 Capsicum annuum HOM05D000966 ORTHO05D004359 8.1e-27 125.6 293 35.5
Sopen06g020060 Solanum pennellii HOM05D000966 ORTHO05D004359 8.1e-27 125.6 300 34.3
Nitab4.5_0005166g0010 Nicotiana tabacum HOM05D000966 ORTHO05D004359 3.1e-26 123.6 298 33.2
CANSAT64G2451 Cannabis sativa HOM05D000966 ORTHO05D004359 5.3e-26 122.9 276 34.1
Sc26g0002860 Simmondsia chinensis HOM05D000966 ORTHO05D004359 2.6e-25 120.6 328 28.7
Aqoxy5G02416 Aquilegia oxysepala HOM05D000966 ORTHO05D004359 3.4e-25 120.2 337 29.4
Ah.05g169110 Amaranthus hybridus HOM05D000966 ORTHO05D004359 1.0e-24 118.6 281 32.7
THA.LOC104809635 Tarenaya hassleriana HOM05D000966 ORTHO05D004359 2.9e-24 117.1 278 34.2
Nn1g08953 Nelumbo nucifera HOM05D000966 ORTHO05D004359 3.8e-24 116.7 339 30.4
Gohir.A05G238000 Gossypium hirsutum HOM05D000966 ORTHO05D004359 4.9e-24 116.3 306 32.7
EL10Ac1g01359 Beta vulgaris HOM05D000966 ORTHO05D004359 6.5e-24 115.9 304 32.6
Hund26773 Selenicereus undatus HOM05D000966 ORTHO05D004359 1.1e-23 115.2 324 29.6
SGA_v2.0_scaffold25G11140 Striga asiatica HOM05D000966 ORTHO05D004359 3.2e-23 113.6 286 33.6
CSS0037288 Camellia sinensis var. sinensis HOM05D000966 ORTHO05D004359 9.3e-23 112.1 165 41.8
CDE02G1847 Ceratophyllum demersum HOM05D000966 ORTHO05D004359 4.6e-22 109.8 310 30.0
unitig_0.g2115 Utricularia gibba HOM05D000966 ORTHO05D004359 2.3e-21 107.5 190 34.7
BcaC08g47620 Brassica carinata HOM05D000966 ORTHO05D004359 3.9e-21 106.7 265 32.1
CDE08G1614 Ceratophyllum demersum HOM05D000966 ORTHO05D004359 6.7e-21 105.9 323 30.0
HanXRQChr05g0149781 Helianthus annuus HOM05D000966 ORTHO05D004359 3.3e-20 103.6 278 30.9
Lsat_1_v5_gn_6_110300 Lactuca sativa HOM05D000966 ORTHO05D004359 3.3e-20 103.6 286 30.1
Duzib041G0231 Durio zibethinus HOM05D000966 ORTHO05D004359 7.4e-20 102.4 262 32.4
unitig_747.g21497 Utricularia gibba HOM05D000966 ORTHO05D004359 9.6e-20 102.1 159 39.0
Nitab4.5_0003978g0030 Nicotiana tabacum HOM05D000966 ORTHO05D004359 1.6e-19 101.3 252 34.5
AUR62013429 Chenopodium quinoa HOM05D000966 ORTHO05D004359 4.8e-19 99.8 304 30.9
AUR62007714 Chenopodium quinoa HOM05D000966 ORTHO05D004359 1.8e-18 97.8 307 30.9
Nitab4.5_0000317g0220 Nicotiana tabacum HOM05D000966 ORTHO05D004359 1.8e-18 97.8 246 35.4
ECA246G3937 Erigeron canadensis HOM05D000966 ORTHO05D004359 6.9e-18 95.9 285 28.1
PSO017G4997 Papaver somniferum HOM05D000966 ORTHO05D004359 3.4e-17 93.6 310 30.3
CDE06G2822 Ceratophyllum demersum HOM05D000625 ORTHO05D004359 1.3e-16 91.7 321 28.7
PGSC0003DMG402025314 Solanum tuberosum HOM05D000966 ORTHO05D004359 1.3e-16 91.7 220 32.3
PSO170G5191 Papaver somniferum HOM05D000966 ORTHO05D004359 1.7e-16 91.3 306 30.1
Psat1g148080 Pisum sativum HOM05D000966 ORTHO05D004359 2.2e-16 90.9 94 47.9
Psat5g084600 Pisum sativum HOM05D000966 ORTHO05D004359 2.2e-16 90.9 80 52.5
ATR0584G046 Amborella trichopoda HOM05D000966 ORTHO05D004359 1.4e-15 88.2 299 29.8
HPP92_016112 Vanilla planifolia HOM05D000966 ORTHO05D004359 5.5e-15 86.3 313 28.4
Oeu026372.2 Olea europaea HOM05D000966 ORTHO05D004359 3.5e-14 83.6 76 52.6
Rhsim06G0088400 Rhododendron simsii HOM05D000966 ORTHO05D004359 7.7e-09 65.9 67 50.7
DCAR_016659 Daucus carota HOM05D000966 ORTHO05D004359 6.5e-08 62.8 96 42.7
Psat1g148000 Pisum sativum HOM05D005005 ORTHO05D004359 1.9e-07 61.2 249 26.5
unitig_747.g21498 Utricularia gibba HOM05D000966 ORTHO05D004359 2.7e-06 57.4 93 37.6
CANSAT80G2061 Cannabis sativa HOM05D000966 ORTHO05D004359 4.6e-06 56.6 89 38.2


User provided reference genes

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