Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI09073 Sapria himalayana HOM05D006203 ORTHO05D007675 2.3e-57 225.3 112 100.0
Sabra05G0147700 Salix brachista HOM05D006203 ORTHO05D007675 5.0e-36 154.5 93 76.3
Potri.005G193300 Populus trichocarpa HOM05D006203 ORTHO05D007675 6.5e-36 154.1 93 75.3
Cfa018314 Carpinus fangiana HOM05D006203 ORTHO05D007675 7.2e-35 150.6 93 73.1
Eucgr.F04230 Eucalyptus grandis HOM05D006203 ORTHO05D007675 2.1e-34 149.1 92 71.7
Manes.02G180400 Manihot esculenta HOM05D006203 ORTHO05D007675 2.1e-34 149.1 101 68.3
Potri.002G066900 Populus trichocarpa HOM05D006203 ORTHO05D007675 3.6e-34 148.3 92 75.0
TWI60G1081 Tripterygium wilfordii HOM05D006203 ORTHO05D007675 1.4e-33 146.4 91 74.7
CiPaw.16G011200 Carya illinoinensis HOM05D006203 ORTHO05D007675 1.8e-33 146.0 90 73.3
Cpa.g.sc21.210 Carica papaya HOM05D006203 ORTHO05D007675 2.3e-33 145.6 91 73.6
CANSAT25G3154 Cannabis sativa HOM05D006203 ORTHO05D007675 3.0e-33 145.2 91 72.5
QL02p038832 Quercus lobata HOM05D006203 ORTHO05D007675 3.9e-33 144.8 89 75.3
Medtr1g098650 Medicago truncatula HOM05D006203 ORTHO05D007675 8.8e-33 143.7 97 66.0
ClCG08G002400 Citrullus lanatus HOM05D006203 ORTHO05D007675 1.5e-32 142.9 91 70.3
Ciclev10001246m.g Citrus clementina HOM05D006203 ORTHO05D007675 2.0e-32 142.5 93 67.7
Dinv41071 Davidia involucrata HOM05D006203 ORTHO05D007675 2.0e-32 142.5 91 70.3
PGR044G2231 Punica granatum HOM05D006203 ORTHO05D007675 2.0e-32 142.5 92 68.5
PGR100G0007 Punica granatum HOM05D006203 ORTHO05D007675 2.0e-32 142.5 92 68.5
COL.COLO4_29853 Corchorus olitorius HOM05D006203 ORTHO05D007675 3.3e-32 141.7 96 66.7
Lj5g0013006 Lotus japonicus HOM05D006203 ORTHO05D007675 3.3e-32 141.7 101 65.3
THA.LOC104803037 Tarenaya hassleriana HOM05D006203 ORTHO05D007675 3.3e-32 141.7 91 71.4
TPR.G17026 Trifolium pratense HOM05D006203 ORTHO05D007675 4.4e-32 141.4 101 65.3
CsaV3_6G002690 Cucumis sativus L. HOM05D006203 ORTHO05D007675 5.7e-32 141.0 91 70.3
Hma1.2p1_0105F.1_g050570 Hydrangea macrophylla HOM05D006203 ORTHO05D007675 5.7e-32 141.0 91 69.2
PSO017G3146 Papaver somniferum HOM05D006203 ORTHO05D007675 5.7e-32 141.0 101 59.4
VMungo0720G1833 Vigna mungo HOM05D006203 ORTHO05D007675 5.7e-32 141.0 101 66.3
Ca_10680_v3 Cicer arietinum L. HOM05D006203 ORTHO05D007675 7.4e-32 140.6 93 69.9
Psat1g027320 Pisum sativum HOM05D006203 ORTHO05D007675 7.4e-32 140.6 101 64.4
Thecc.08G154300 Theobroma cacao HOM05D006203 ORTHO05D007675 9.7e-32 140.2 94 67.0
Atru.chr13.2086 Acer truncatum HOM05D006203 ORTHO05D007675 1.3e-31 139.8 98 64.3
CSS0037443 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 1.3e-31 139.8 106 60.4
CSS0039383 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 1.3e-31 139.8 106 60.4
MELO3C025014.2 Cucumis melo HOM05D006203 ORTHO05D007675 1.7e-31 139.4 90 70.0
AUR62026688 Chenopodium quinoa HOM05D006203 ORTHO05D007675 2.2e-31 139.0 102 65.7
PSO063G4112 Papaver somniferum HOM05D006203 ORTHO05D007675 2.2e-31 139.0 96 60.4
Dinv41073 Davidia involucrata HOM05D006203 ORTHO05D007675 2.8e-31 138.7 99 63.6
GSVIVG01034547001 Vitis vinifera HOM05D006203 ORTHO05D007675 2.8e-31 138.7 98 64.3
AUR62040604 Chenopodium quinoa HOM05D006203 ORTHO05D007675 4.8e-31 137.9 102 64.7
Aa31LG6G9900 Aethionema arabicum HOM05D006203 ORTHO05D007675 6.3e-31 137.5 95 67.4
Duzib116G0092 Durio zibethinus HOM05D006203 ORTHO05D007675 8.2e-31 137.1 94 66.0
Thhalv10004157m.g Eutrema salsugineum HOM05D006203 ORTHO05D007675 8.2e-31 137.1 96 65.6
Nitab4.5_0002497g0040 Nicotiana tabacum HOM05D006203 ORTHO05D007675 8.2e-31 137.1 91 67.0
Sp1g32440 Schrenkiella parvula HOM05D006203 ORTHO05D007675 1.1e-30 136.7 90 70.0
Sed0022684 Sechium edule HOM05D006203 ORTHO05D007675 1.1e-30 136.7 91 67.0
Actinidia29535 Actinidia chinensis HOM05D006203 ORTHO05D007675 1.4e-30 136.3 98 61.2
EL10Ac1g01566 Beta vulgaris HOM05D006203 ORTHO05D007675 3.1e-30 135.2 98 67.3
Oeu051272.1 Olea europaea HOM05D006203 ORTHO05D007675 3.1e-30 135.2 93 63.4
Phvul.007G080700 Phaseolus vulgaris HOM05D006203 ORTHO05D007675 3.1e-30 135.2 101 63.4
BcaB07g33983 Brassica carinata HOM05D006203 ORTHO05D007675 4.1e-30 134.8 90 68.9
RcHm_v2.0_Chr6g0275101 Rosa chinensis HOM05D006203 ORTHO05D007675 4.1e-30 134.8 94 66.0
Hund17446 Selenicereus undatus HOM05D006203 ORTHO05D007675 4.1e-30 134.8 94 63.8
TAR628G0500 Trochodendron aralioides HOM05D006203 ORTHO05D007675 4.1e-30 134.8 92 67.4
FAN27G1038 Fragaria x ananassa HOM05D006203 ORTHO05D007675 5.3e-30 134.4 99 63.6
Nitab4.5_0001187g0150 Nicotiana tabacum HOM05D006203 ORTHO05D007675 5.3e-30 134.4 91 63.7
Oeu002058.2 Olea europaea HOM05D006203 ORTHO05D007675 5.3e-30 134.4 90 65.6
unitig_82.g27121 Utricularia gibba HOM05D006203 ORTHO05D007675 5.3e-30 134.4 90 65.6
FvH4_2g13470 Fragaria vesca HOM05D006203 ORTHO05D007675 6.9e-30 134.0 99 63.6
Sc02g0003970 Simmondsia chinensis HOM05D006203 ORTHO05D007675 6.9e-30 134.0 98 64.3
Carub.0001s3458 Capsella rubella HOM05D006203 ORTHO05D007675 9.1e-30 133.7 96 63.5
Glyma.20G167800 Glycine max HOM05D006203 ORTHO05D007675 9.1e-30 133.7 100 61.0
Rhsim04G0148800 Rhododendron simsii HOM05D006203 ORTHO05D007675 9.1e-30 133.7 90 66.7
SGA_v2.0_scaffold24G10302 Striga asiatica HOM05D006203 ORTHO05D007675 9.1e-30 133.7 90 64.4
Ah.05g168000 Amaranthus hybridus HOM05D006203 ORTHO05D007675 1.2e-29 133.3 93 65.6
FAN24G2615 Fragaria x ananassa HOM05D006203 ORTHO05D007675 1.2e-29 133.3 99 63.6
SalBow7G2343 Salvia bowleyana HOM05D006203 ORTHO05D007675 1.5e-29 132.9 95 62.1
SalBow7G3786 Salvia bowleyana HOM05D006203 ORTHO05D007675 1.5e-29 132.9 95 62.1
CARHR035390 Cardamine hirsuta HOM05D006203 ORTHO05D007675 2.0e-29 132.5 91 65.9
Prupe.8G033400 Prunus persica HOM05D006203 ORTHO05D007675 2.6e-29 132.1 90 68.9
MD05G1027600 Malus domestica HOM05D006203 ORTHO05D007675 4.5e-29 131.3 90 67.8
Sopen04g027530 Solanum pennellii HOM05D006203 ORTHO05D007675 4.5e-29 131.3 91 63.7
vmacro12408 Vaccinium macrocarpon HOM05D006203 ORTHO05D007675 4.5e-29 131.3 97 63.9
arahy.Tifrunner.gnm1.ann1.1SB772 Arachis hypogaea HOM05D006203 ORTHO05D007675 5.9e-29 131.0 90 61.1
arahy.Tifrunner.gnm1.ann1.YI7QGP Arachis hypogaea HOM05D006203 ORTHO05D007675 5.9e-29 131.0 90 61.1
Gohir.A02G112707 Gossypium hirsutum HOM05D006203 ORTHO05D007675 5.9e-29 131.0 90 64.4
Gorai.002G055700 Gossypium raimondii HOM05D006203 ORTHO05D007675 7.7e-29 130.6 90 63.3
PGSC0003DMG402024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 7.7e-29 130.6 91 62.6
CAN.G1215.8 Capsicum annuum HOM05D006203 ORTHO05D007675 1.0e-28 130.2 95 61.1
CDE06G0803 Ceratophyllum demersum HOM05D006203 ORTHO05D007675 1.0e-28 130.2 90 64.4
PGSC0003DMG401024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 1.0e-28 130.2 90 63.3
Lj4C698G9 Lonicera japonica HOM05D006203 ORTHO05D007675 1.3e-28 129.8 91 62.6
Solyc04g071550.2 Solanum lycopersicum HOM05D006203 ORTHO05D007675 1.3e-28 129.8 91 62.6
FAN15G3573 Fragaria x ananassa HOM05D006203 ORTHO05D007675 2.2e-28 129.0 99 61.6
Lalb_Chr21g0305501 Lupinus albus HOM05D006203 ORTHO05D007675 2.2e-28 129.0 90 64.4
AL1G51640 Arabidopsis lyrata HOM05D006203 ORTHO05D007675 2.9e-28 128.6 91 62.6
DCAR_014434 Daucus carota HOM05D006203 ORTHO05D007675 2.9e-28 128.6 98 62.2
DCAR_014436 Daucus carota HOM05D006203 ORTHO05D007675 2.9e-28 128.6 98 62.2
Gohir.D03G060606 Gossypium hirsutum HOM05D006203 ORTHO05D007675 2.9e-28 128.6 90 62.2
A02p14450 Brassica napus HOM05D006203 ORTHO05D007675 3.8e-28 128.3 96 63.5
C02p23400 Brassica napus HOM05D006203 ORTHO05D007675 3.8e-28 128.3 96 63.5
BolC2t08473H Brassica oleracea HOM05D006203 ORTHO05D007675 3.8e-28 128.3 96 63.5
Migut.C00987 Erythranthe guttata HOM05D006203 ORTHO05D007675 5.0e-28 127.9 94 59.6
BcaC03g14869 Brassica carinata HOM05D006203 ORTHO05D007675 6.5e-28 127.5 96 63.5
MD10G1028400 Malus domestica HOM05D006203 ORTHO05D007675 6.5e-28 127.5 90 64.4
AT1G43580 Arabidopsis thaliana HOM05D006203 ORTHO05D007675 8.5e-28 127.1 91 61.5
BraA02t06509Z Brassica rapa HOM05D006203 ORTHO05D007675 1.9e-27 125.9 95 63.2
Glyma.10G224051 Glycine max HOM05D006203 ORTHO05D007675 1.9e-27 125.9 91 60.4
MBI09_g13282_MAGBIO Magnolia biondii HOM05D006203 ORTHO05D007675 2.5e-27 125.6 89 62.9
SEGI_28248 Sequoiadendron giganteum HOM05D006203 ORTHO05D007675 1.6e-26 122.9 90 62.2
HanXRQChr11g0320311 Helianthus annuus HOM05D006203 ORTHO05D007675 2.1e-26 122.5 90 60.0
Zm00001eb062160 Zea mays HOM05D006203 ORTHO05D007675 3.6e-26 121.7 90 61.1
Zm00001eb440740 Zea mays HOM05D006203 ORTHO05D007675 3.6e-26 121.7 90 61.1
Os04g0423700 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 3.9e-25 118.2 90 60.0
HPP92_014433 Vanilla planifolia HOM05D006203 ORTHO05D007675 3.9e-25 118.2 89 59.6
ECA232G0861 Erigeron canadensis HOM05D006203 ORTHO05D007675 8.8e-25 117.1 100 53.0
Lsat_1_v5_gn_9_41100 Lactuca sativa HOM05D006203 ORTHO05D007675 1.1e-24 116.7 96 54.2
ATR0820G052 Amborella trichopoda HOM05D006203 ORTHO05D007675 1.8e-22 109.4 91 53.8
Zm00001eb243320 Zea mays HOM05D006203 ORTHO05D007675 4.1e-22 108.2 92 54.3
Aqoxy5G02059 Aquilegia oxysepala HOM05D006203 ORTHO05D007675 1.6e-21 106.3 99 52.5
Peaxi162Scf00599g00124 Petunia axillaris HOM05D006203 ORTHO05D007675 2.6e-21 105.5 84 57.1
SMO165G0112 Selaginella moellendorffii HOM05D006203 ORTHO05D007675 2.6e-21 105.5 89 53.9
Peaxi162Scf00599g00123 Petunia axillaris HOM05D006203 ORTHO05D007675 3.5e-21 105.1 83 56.6
Mapoly0036s0040 Marchantia polymorpha HOM05D006203 ORTHO05D007675 7.7e-21 104.0 87 55.2
Pp3c10_9040 Physcomitrium patens HOM05D006203 ORTHO05D007675 1.0e-20 103.6 87 51.7
BcaC08g42813 Brassica carinata HOM05D006203 ORTHO05D007675 7.2e-19 97.4 80 56.2
AagrBONN_evm.TU.Sc2ySwM_344.5191 Anthoceros agrestis HOM05D006203 ORTHO05D007675 1.2e-18 96.7 95 47.4
Pp3c1_26540 Physcomitrium patens HOM05D006203 ORTHO05D007675 1.8e-17 92.8 96 40.6
Os02g0543100 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 2.6e-16 89.0 86 51.2
PSO063G4868 Papaver somniferum HOM05D006203 ORTHO05D007675 8.5e-12 73.9 104 41.3
CBR_g4804 Chara braunii HOM05D006203 ORTHO05D007675 4.7e-10 68.2 92 41.3
CSS0028086 Camellia sinensis var. sinensis HOM05D001336 ORTHO05D001211 2.2e-07 59.3 42 57.1


User provided reference genes

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