Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI09072 Sapria himalayana HOM05D006203 ORTHO05D007675 1.1e-217 759.6 372 100.0
Duzib116G0092 Durio zibethinus HOM05D006203 ORTHO05D007675 9.4e-140 500.7 353 70.5
Thecc.08G154300 Theobroma cacao HOM05D006203 ORTHO05D007675 7.4e-137 491.1 350 71.1
Manes.02G180400 Manihot esculenta HOM05D006203 ORTHO05D007675 1.3e-136 490.3 350 70.3
Hma1.2p1_0105F.1_g050570 Hydrangea macrophylla HOM05D006203 ORTHO05D007675 1.7e-136 490.0 350 70.0
Potri.005G193300 Populus trichocarpa HOM05D006203 ORTHO05D007675 4.8e-136 488.4 350 70.0
COL.COLO4_29853 Corchorus olitorius HOM05D006203 ORTHO05D007675 2.4e-135 486.1 356 68.0
Sabra05G0147700 Salix brachista HOM05D006203 ORTHO05D007675 3.1e-135 485.7 353 68.6
QL02p038832 Quercus lobata HOM05D006203 ORTHO05D007675 4.1e-135 485.3 349 69.1
GSVIVG01034547001 Vitis vinifera HOM05D006203 ORTHO05D007675 2.0e-134 483.0 352 68.8
Gohir.D03G060606 Gossypium hirsutum HOM05D006203 ORTHO05D007675 1.0e-133 480.7 350 68.9
Gorai.002G055700 Gossypium raimondii HOM05D006203 ORTHO05D007675 1.0e-133 480.7 350 68.9
Potri.002G066900 Populus trichocarpa HOM05D006203 ORTHO05D007675 3.8e-133 478.8 350 68.9
Gohir.A02G112707 Gossypium hirsutum HOM05D006203 ORTHO05D007675 1.9e-132 476.5 350 68.3
Ciclev10001246m.g Citrus clementina HOM05D006203 ORTHO05D007675 4.2e-132 475.3 350 67.4
CSS0037443 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 7.2e-132 474.6 353 68.0
Eucgr.F04230 Eucalyptus grandis HOM05D006203 ORTHO05D007675 7.2e-132 474.6 351 68.1
Cpa.g.sc21.210 Carica papaya HOM05D006203 ORTHO05D007675 9.4e-132 474.2 353 66.6
Actinidia29535 Actinidia chinensis HOM05D006203 ORTHO05D007675 1.2e-131 473.8 353 67.1
CSS0039383 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 2.7e-131 472.6 353 68.0
Rhsim04G0148800 Rhododendron simsii HOM05D006203 ORTHO05D007675 3.6e-131 472.2 352 67.9
TWI60G1081 Tripterygium wilfordii HOM05D006203 ORTHO05D007675 6.1e-131 471.5 353 66.9
CANSAT25G3154 Cannabis sativa HOM05D006203 ORTHO05D007675 2.3e-130 469.5 353 67.4
Haze_17763 Corylus avellana HOM05D006203 ORTHO05D007675 2.3e-130 469.5 358 67.0
CiPaw.16G011200 Carya illinoinensis HOM05D006203 ORTHO05D007675 1.2e-129 467.2 351 67.5
vmacro12408 Vaccinium macrocarpon HOM05D006203 ORTHO05D007675 1.5e-129 466.8 354 66.7
Cfa018314 Carpinus fangiana HOM05D006203 ORTHO05D007675 2.0e-129 466.5 351 67.2
EL10Ac1g01566 Beta vulgaris HOM05D006203 ORTHO05D007675 5.7e-129 464.9 354 66.7
ClCG08G002400 Citrullus lanatus HOM05D006203 ORTHO05D007675 9.7e-129 464.2 359 65.2
CsaV3_6G002690 Cucumis sativus L. HOM05D006203 ORTHO05D007675 8.2e-128 461.1 356 64.9
MELO3C025014.2 Cucumis melo HOM05D006203 ORTHO05D007675 2.4e-127 459.5 356 64.9
Lj5g0013006 Lotus japonicus HOM05D006203 ORTHO05D007675 1.6e-126 456.8 353 66.6
SGA_v2.0_scaffold24G10302 Striga asiatica HOM05D006203 ORTHO05D007675 2.0e-126 456.4 350 64.6
Lj4C698G9 Lonicera japonica HOM05D006203 ORTHO05D007675 1.3e-125 453.8 352 67.0
AUR62026688 Chenopodium quinoa HOM05D006203 ORTHO05D007675 5.0e-125 451.8 353 64.6
PGR044G2231 Punica granatum HOM05D006203 ORTHO05D007675 6.5e-125 451.4 352 65.1
PGR100G0007 Punica granatum HOM05D006203 ORTHO05D007675 6.5e-125 451.4 352 65.1
Solyc04g071550.2 Solanum lycopersicum HOM05D006203 ORTHO05D007675 8.5e-125 451.1 353 64.6
Oeu002058.2 Olea europaea HOM05D006203 ORTHO05D007675 1.1e-124 450.7 357 63.6
Sopen04g027530 Solanum pennellii HOM05D006203 ORTHO05D007675 1.9e-124 449.9 353 64.6
AUR62040604 Chenopodium quinoa HOM05D006203 ORTHO05D007675 3.2e-124 449.1 353 64.3
Glyma.10G224051 Glycine max HOM05D006203 ORTHO05D007675 3.2e-124 449.1 354 64.4
TAR628G0500 Trochodendron aralioides HOM05D006203 ORTHO05D007675 3.2e-124 449.1 350 63.7
Glyma.20G167800 Glycine max HOM05D006203 ORTHO05D007675 4.2e-124 448.7 354 64.1
CAN.G1215.8 Capsicum annuum HOM05D006203 ORTHO05D007675 5.5e-124 448.4 353 64.3
Lsat_1_v5_gn_9_41100 Lactuca sativa HOM05D006203 ORTHO05D007675 9.4e-124 447.6 356 64.0
MBI09_g13282_MAGBIO Magnolia biondii HOM05D006203 ORTHO05D007675 9.4e-124 447.6 350 64.6
MD10G1028400 Malus domestica HOM05D006203 ORTHO05D007675 9.4e-124 447.6 359 63.2
VMungo0720G1833 Vigna mungo HOM05D006203 ORTHO05D007675 1.6e-123 446.8 353 63.7
Atru.chr13.2086 Acer truncatum HOM05D006203 ORTHO05D007675 2.7e-123 446.0 350 63.1
Prupe.8G033400 Prunus persica HOM05D006203 ORTHO05D007675 2.7e-123 446.0 351 63.2
Nitab4.5_0001187g0150 Nicotiana tabacum HOM05D006203 ORTHO05D007675 4.7e-123 445.3 351 63.2
PGSC0003DMG402024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 1.8e-122 443.4 353 63.5
Thhalv10004157m.g Eutrema salsugineum HOM05D006203 ORTHO05D007675 2.3e-122 443.0 351 63.5
CARHR035390 Cardamine hirsuta HOM05D006203 ORTHO05D007675 3.0e-122 442.6 351 63.2
Nitab4.5_0002497g0040 Nicotiana tabacum HOM05D006203 ORTHO05D007675 3.0e-122 442.6 350 63.4
Sed0022684 Sechium edule HOM05D006203 ORTHO05D007675 4.0e-122 442.2 353 61.5
Psat1g027320 Pisum sativum HOM05D006203 ORTHO05D007675 5.2e-122 441.8 353 63.7
HanXRQChr11g0320311 Helianthus annuus HOM05D006203 ORTHO05D007675 6.8e-122 441.4 348 64.4
ECA232G0861 Erigeron canadensis HOM05D006203 ORTHO05D007675 8.8e-122 441.0 350 63.7
Medtr1g098650 Medicago truncatula HOM05D006203 ORTHO05D007675 8.8e-122 441.0 353 63.5
PSO017G3146 Papaver somniferum HOM05D006203 ORTHO05D007675 8.8e-122 441.0 361 61.5
BcaC03g14869 Brassica carinata HOM05D006203 ORTHO05D007675 1.5e-121 440.3 351 63.2
A02p14450 Brassica napus HOM05D006203 ORTHO05D007675 1.5e-121 440.3 351 63.2
C02p23400 Brassica napus HOM05D006203 ORTHO05D007675 1.5e-121 440.3 351 63.2
CDE06G0803 Ceratophyllum demersum HOM05D006203 ORTHO05D007675 1.5e-121 440.3 353 61.5
AL1G51640 Arabidopsis lyrata HOM05D006203 ORTHO05D007675 2.0e-121 439.9 351 63.5
BolC2t08473H Brassica oleracea HOM05D006203 ORTHO05D007675 2.0e-121 439.9 351 63.2
PSO063G4112 Papaver somniferum HOM05D006203 ORTHO05D007675 2.0e-121 439.9 361 60.9
Hund17446 Selenicereus undatus HOM05D006203 ORTHO05D007675 2.0e-121 439.9 354 63.3
Phvul.007G080700 Phaseolus vulgaris HOM05D006203 ORTHO05D007675 2.6e-121 439.5 353 63.2
SalBow7G3786 Salvia bowleyana HOM05D006203 ORTHO05D007675 2.6e-121 439.5 350 63.4
Sp1g32440 Schrenkiella parvula HOM05D006203 ORTHO05D007675 3.4e-121 439.1 351 62.7
MD05G1027600 Malus domestica HOM05D006203 ORTHO05D007675 4.4e-121 438.7 359 61.8
THA.LOC104803037 Tarenaya hassleriana HOM05D006203 ORTHO05D007675 5.7e-121 438.3 353 63.2
Lalb_Chr21g0305501 Lupinus albus HOM05D006203 ORTHO05D007675 7.5e-121 438.0 348 63.2
RcHm_v2.0_Chr6g0275101 Rosa chinensis HOM05D006203 ORTHO05D007675 7.5e-121 438.0 350 63.4
Ca_10680_v3 Cicer arietinum L. HOM05D006203 ORTHO05D007675 9.8e-121 437.6 351 64.1
SalBow7G2343 Salvia bowleyana HOM05D006203 ORTHO05D007675 2.2e-120 436.4 350 63.1
TPR.G17026 Trifolium pratense HOM05D006203 ORTHO05D007675 2.2e-120 436.4 353 63.5
BcaB07g33983 Brassica carinata HOM05D006203 ORTHO05D007675 6.3e-120 434.9 351 63.0
Cc10_g14900 Coffea canephora HOM05D006203 ORTHO05D007675 6.3e-120 434.9 353 60.6
AT1G43580 Arabidopsis thaliana HOM05D006203 ORTHO05D007675 1.1e-119 434.1 351 63.0
ATR0820G052 Amborella trichopoda HOM05D006203 ORTHO05D007675 1.8e-119 433.3 353 61.5
Carub.0001s3458 Capsella rubella HOM05D006203 ORTHO05D007675 5.4e-119 431.8 351 63.5
arahy.Tifrunner.gnm1.ann1.1SB772 Arachis hypogaea HOM05D006203 ORTHO05D007675 9.1e-119 431.0 356 62.1
Migut.C00987 Erythranthe guttata HOM05D006203 ORTHO05D007675 9.1e-119 431.0 353 62.3
DCAR_014434 Daucus carota HOM05D006203 ORTHO05D007675 1.2e-118 430.6 353 62.3
DCAR_014436 Daucus carota HOM05D006203 ORTHO05D007675 1.2e-118 430.6 353 62.3
Aa31LG6G9900 Aethionema arabicum HOM05D006203 ORTHO05D007675 2.0e-118 429.9 349 61.9
Os04g0423700 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 1.0e-117 427.6 353 61.8
arahy.Tifrunner.gnm1.ann1.YI7QGP Arachis hypogaea HOM05D006203 ORTHO05D007675 1.7e-117 426.8 356 61.5
Peaxi162Scf00599g00123 Petunia axillaris HOM05D006203 ORTHO05D007675 1.7e-117 426.8 343 63.3
Zm00001eb062160 Zea mays HOM05D006203 ORTHO05D007675 3.8e-117 425.6 352 61.4
FvH4_2g13470 Fragaria vesca HOM05D006203 ORTHO05D007675 8.5e-117 424.5 376 59.0
FAN24G2615 Fragaria x ananassa HOM05D006203 ORTHO05D007675 8.5e-117 424.5 376 59.0
FAN15G3573 Fragaria x ananassa HOM05D006203 ORTHO05D007675 3.2e-116 422.5 376 58.5
FAN27G1038 Fragaria x ananassa HOM05D006203 ORTHO05D007675 1.6e-115 420.2 376 57.7
Ah.05g168000 Amaranthus hybridus HOM05D006203 ORTHO05D007675 3.6e-115 419.1 349 62.5
Oeu051272.1 Olea europaea HOM05D006203 ORTHO05D007675 5.7e-113 411.8 329 63.5
Os02g0543100 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 2.2e-112 409.8 350 60.3
Aqoxy5G02059 Aquilegia oxysepala HOM05D006203 ORTHO05D007675 6.3e-112 408.3 353 60.1
SEGI_28248 Sequoiadendron giganteum HOM05D006203 ORTHO05D007675 7.0e-111 404.8 374 55.3
Zm00001eb243320 Zea mays HOM05D006203 ORTHO05D007675 3.3e-108 396.0 350 57.4
AagrBONN_evm.TU.Sc2ySwM_344.5191 Anthoceros agrestis HOM05D006203 ORTHO05D007675 1.2e-107 394.0 356 55.6
SMO165G0112 Selaginella moellendorffii HOM05D006203 ORTHO05D007675 2.0e-102 376.7 363 53.7
Pp3c10_9040 Physcomitrium patens HOM05D006203 ORTHO05D007675 8.3e-96 354.8 362 51.1
Sed0004557 Sechium edule HOM05D006203 ORTHO05D007675 2.0e-94 350.1 354 53.4
Pp3c1_26540 Physcomitrium patens HOM05D006203 ORTHO05D007675 4.7e-91 339.0 361 47.6
unitig_82.g27121 Utricularia gibba HOM05D006203 ORTHO05D007675 2.3e-90 336.7 349 54.2
Mapoly0036s0040 Marchantia polymorpha HOM05D006203 ORTHO05D007675 5.2e-90 335.5 354 48.9
HPP92_014433 Vanilla planifolia HOM05D006203 ORTHO05D007675 7.5e-89 331.6 358 53.9
Nn5g28766 Nelumbo nucifera HOM05D006203 ORTHO05D007675 3.0e-85 319.7 219 72.6
Sc02g0003970 Simmondsia chinensis HOM05D006203 ORTHO05D007675 1.6e-83 313.9 220 70.9
BcaC08g42813 Brassica carinata HOM05D006203 ORTHO05D007675 1.5e-81 307.4 326 52.8
Dinv41071 Davidia involucrata HOM05D006203 ORTHO05D007675 4.6e-70 269.2 196 70.4
CBR_g4804 Chara braunii HOM05D006203 ORTHO05D007675 3.0e-69 266.5 315 45.7
Dinv41073 Davidia involucrata HOM05D006203 ORTHO05D007675 1.7e-64 250.8 176 72.2
MSTRG.1091 Avicennia marina HOM05D006203 ORTHO05D007675 3.5e-62 243.0 184 66.3
C06p00250 Brassica napus HOM05D006203 ORTHO05D007675 6.2e-59 232.3 202 59.4
Dinv41070 Davidia involucrata HOM05D006203 ORTHO05D007675 4.3e-44 183.0 137 66.4
Zm00001eb440740 Zea mays HOM05D006203 ORTHO05D007675 4.6e-38 162.9 172 50.0
Cre01.g033050 Chlamydomonas reinhardtii HOM05D006203 ORTHO05D007675 1.2e-09 68.6 283 23.0


User provided reference genes

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