Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI08951 Sapria himalayana HOM05D004363 ORTHO05D005110 2.4e-81 305.4 155 100.0
Rhsim11G0045000 Rhododendron simsii HOM05D004363 ORTHO05D005110 1.8e-23 113.2 135 47.4
AUR62041186 Chenopodium quinoa HOM05D004363 ORTHO05D005110 1.1e-22 110.5 83 65.1
FAN09G2042 Fragaria x ananassa HOM05D004363 ORTHO05D005110 1.5e-22 110.2 83 65.1
FvH4_6g20450 Fragaria vesca HOM05D004363 ORTHO05D005110 1.9e-22 109.8 83 65.1
FAN14G2782 Fragaria x ananassa HOM05D004363 ORTHO05D005110 1.9e-22 109.8 83 65.1
RcHm_v2.0_Chr3g0476301 Rosa chinensis HOM05D004363 ORTHO05D005110 2.5e-22 109.4 83 65.1
Atru.chr8.1332 Acer truncatum HOM05D004363 ORTHO05D005110 3.3e-22 109.0 83 67.5
AUR62030686 Chenopodium quinoa HOM05D004363 ORTHO05D005110 3.3e-22 109.0 83 63.9
Prupe.7G093600 Prunus persica HOM05D004363 ORTHO05D005110 3.3e-22 109.0 83 68.7
CSS0037163 Camellia sinensis var. sinensis HOM05D004363 ORTHO05D005110 7.4e-22 107.8 83 66.3
COL.COLO4_29546 Corchorus olitorius HOM05D004363 ORTHO05D005110 9.6e-22 107.5 83 67.5
Oeu035643.1 Olea europaea HOM05D004363 ORTHO05D005110 9.6e-22 107.5 121 52.1
Eucgr.A02575 Eucalyptus grandis HOM05D004363 ORTHO05D005110 1.3e-21 107.1 85 62.4
MD12G1041600 Malus domestica HOM05D004363 ORTHO05D005110 1.3e-21 107.1 83 65.1
Nn6g34649 Nelumbo nucifera HOM05D004363 ORTHO05D005110 1.6e-21 106.7 83 66.3
Sc01g0005470 Simmondsia chinensis HOM05D004363 ORTHO05D005110 1.6e-21 106.7 83 66.3
MELO3C009547.2 Cucumis melo HOM05D004363 ORTHO05D005110 2.1e-21 106.3 91 60.4
Aqoxy1G00638 Aquilegia oxysepala HOM05D004363 ORTHO05D005110 2.8e-21 105.9 85 62.4
CSS0038425 Camellia sinensis var. sinensis HOM05D004363 ORTHO05D005110 2.8e-21 105.9 119 50.4
MD14G1040700 Malus domestica HOM05D004363 ORTHO05D005110 2.8e-21 105.9 83 65.1
Potri.016G068800 Populus trichocarpa HOM05D004363 ORTHO05D005110 2.8e-21 105.9 84 65.5
Sabra16G0069700 Salix brachista HOM05D004363 ORTHO05D005110 2.8e-21 105.9 84 65.5
Cfa020046 Carpinus fangiana HOM05D004363 ORTHO05D005110 3.7e-21 105.5 85 64.7
Cc06_g06670 Coffea canephora HOM05D004363 ORTHO05D005110 4.8e-21 105.1 83 63.9
FAN02G1528 Fragaria x ananassa HOM05D004363 ORTHO05D005110 4.8e-21 105.1 83 62.7
CAN.G911.40 Capsicum annuum HOM05D004363 ORTHO05D005110 6.2e-21 104.8 85 64.7
ClCG10G018260 Citrullus lanatus HOM05D004363 ORTHO05D005110 6.2e-21 104.8 85 63.5
PGR004G0690 Punica granatum HOM05D004363 ORTHO05D005110 6.2e-21 104.8 85 63.5
EL10Ac5g11738 Beta vulgaris HOM05D004363 ORTHO05D005110 8.2e-21 104.4 83 63.9
Dinv31774 Davidia involucrata HOM05D004363 ORTHO05D005110 8.2e-21 104.4 121 50.4
Gohir.A04G054750 Gossypium hirsutum HOM05D004363 ORTHO05D005110 8.2e-21 104.4 83 65.1
vmacro07483 Vaccinium macrocarpon HOM05D004363 ORTHO05D005110 8.2e-21 104.4 83 61.4
Haze_20158 Corylus avellana HOM05D004363 ORTHO05D005110 1.1e-20 104.0 85 63.5
Gohir.A11G315700 Gossypium hirsutum HOM05D004363 ORTHO05D005110 1.1e-20 104.0 83 66.3
Gohir.D11G332900 Gossypium hirsutum HOM05D004363 ORTHO05D005110 1.1e-20 104.0 83 66.3
Gorai.007G363900 Gossypium raimondii HOM05D004363 ORTHO05D005110 1.1e-20 104.0 83 66.3
Duzib093G0100 Durio zibethinus HOM05D004363 ORTHO05D005110 1.4e-20 103.6 83 65.1
Gorai.009G393900 Gossypium raimondii HOM05D004363 ORTHO05D005110 1.4e-20 103.6 83 63.9
SGA_v2.0_scaffold13G06653 Striga asiatica HOM05D004363 ORTHO05D005110 1.4e-20 103.6 83 62.7
Gohir.D04G091900 Gossypium hirsutum HOM05D004363 ORTHO05D005110 1.8e-20 103.2 83 63.9
CsaV3_3G038050 Cucumis sativus L. HOM05D004363 ORTHO05D005110 2.4e-20 102.8 85 62.4
Duzib128G0297 Durio zibethinus HOM05D004363 ORTHO05D005110 2.4e-20 102.8 83 63.9
Cpa.g.sc104.18 Carica papaya HOM05D004363 ORTHO05D005110 3.1e-20 102.4 83 63.9
Lj1C1055T8 Lonicera japonica HOM05D004363 ORTHO05D005110 3.1e-20 102.4 83 61.4
TAR169G0003 Trochodendron aralioides HOM05D004363 ORTHO05D005110 4.0e-20 102.1 83 62.7
Solyc01g006960.3 Solanum lycopersicum HOM05D004363 ORTHO05D005110 5.3e-20 101.7 74 67.6
TAR628G0010 Trochodendron aralioides HOM05D004363 ORTHO05D005110 5.3e-20 101.7 85 61.2
CiPaw.10G018600 Carya illinoinensis HOM05D004363 ORTHO05D005110 6.9e-20 101.3 85 62.4
Dinv12347 Davidia involucrata HOM05D004363 ORTHO05D005110 6.9e-20 101.3 123 45.5
Migut.J00693 Erythranthe guttata HOM05D004363 ORTHO05D005110 9.0e-20 100.9 83 60.2
Sopen01g002950 Solanum pennellii HOM05D004363 ORTHO05D005110 9.0e-20 100.9 85 61.2
CANSAT64G2344 Cannabis sativa HOM05D004363 ORTHO05D005110 2.0e-19 99.8 120 50.0
Ciclev10010925m.g Citrus clementina HOM05D004363 ORTHO05D005110 2.0e-19 99.8 83 62.7
PSO384G4461 Papaver somniferum HOM05D004363 ORTHO05D005110 2.0e-19 99.8 85 60.0
Sed0002127 Sechium edule HOM05D004363 ORTHO05D005110 2.0e-19 99.8 85 58.8
HanXRQChr02g0053261 Helianthus annuus HOM05D004363 ORTHO05D005110 2.6e-19 99.4 74 64.9
Psat0s3922g0040 Pisum sativum HOM05D004363 ORTHO05D005110 2.6e-19 99.4 85 60.0
QL07p036386 Quercus lobata HOM05D004363 ORTHO05D005110 2.6e-19 99.4 123 51.2
THA.LOC104820934 Tarenaya hassleriana HOM05D004363 ORTHO05D005110 2.6e-19 99.4 83 62.7
TWI74G0412 Tripterygium wilfordii HOM05D004363 ORTHO05D005110 2.6e-19 99.4 83 62.7
ATR0772G191 Amborella trichopoda HOM05D004363 ORTHO05D005110 4.5e-19 98.6 110 52.7
MSTRG.5891 Avicennia marina HOM05D004363 ORTHO05D005110 4.5e-19 98.6 83 59.0
PSO339G1158 Papaver somniferum HOM05D004363 ORTHO05D005110 5.8e-19 98.2 85 60.0
ECA233G0072 Erigeron canadensis HOM05D004363 ORTHO05D005110 7.6e-19 97.8 74 64.9
MSTRG.19302 Avicennia marina HOM05D004363 ORTHO05D005110 1.0e-18 97.4 83 59.0
AL6G27170 Arabidopsis lyrata HOM05D004363 ORTHO05D005110 1.7e-18 96.7 83 61.4
Carub.0006s1447 Capsella rubella HOM05D004363 ORTHO05D005110 2.2e-18 96.3 83 61.4
Ca_09062_v3 Cicer arietinum L. HOM05D004363 ORTHO05D005110 5.0e-18 95.1 85 58.8
Lsat_1_v5_gn_6_33820 Lactuca sativa HOM05D004363 ORTHO05D005110 5.0e-18 95.1 83 60.2
AT5G16280 Arabidopsis thaliana HOM05D004363 ORTHO05D005110 8.4e-18 94.4 83 60.2
Lalb_Chr25g0287961 Lupinus albus HOM05D004363 ORTHO05D005110 8.4e-18 94.4 85 55.3
Lj1g0000064 Lotus japonicus HOM05D004363 ORTHO05D005110 1.1e-17 94.0 83 59.0
Medtr7g106380 Medicago truncatula HOM05D004363 ORTHO05D005110 1.4e-17 93.6 85 57.6
arahy.Tifrunner.gnm1.ann1.D60SL5 Arachis hypogaea HOM05D004363 ORTHO05D005110 1.9e-17 93.2 85 57.6
arahy.Tifrunner.gnm1.ann1.KT4HPP Arachis hypogaea HOM05D004363 ORTHO05D005110 1.9e-17 93.2 85 57.6
GSVIVG01022591001 Vitis vinifera HOM05D004363 ORTHO05D005110 1.9e-17 93.2 65 70.8
DCAR_020694 Daucus carota HOM05D004363 ORTHO05D005110 2.5e-17 92.8 85 52.9
Glyma.19G200400 Glycine max HOM05D004363 ORTHO05D005110 2.5e-17 92.8 85 58.8
Aa31LG11G13340 Aethionema arabicum HOM05D004363 ORTHO05D005110 4.2e-17 92.0 74 64.9
CARHR197030 Cardamine hirsuta HOM05D004363 ORTHO05D005110 4.2e-17 92.0 83 57.8
Thhalv10012466m.g Eutrema salsugineum HOM05D004363 ORTHO05D005110 4.2e-17 92.0 83 59.0
BcaB01g04994 Brassica carinata HOM05D004363 ORTHO05D005110 5.5e-17 91.7 83 60.2
BraA03t10093Z Brassica rapa HOM05D004363 ORTHO05D005110 5.5e-17 91.7 83 60.2
TPR.G31289 Trifolium pratense HOM05D004363 ORTHO05D005110 5.5e-17 91.7 106 50.0
VMungo1383G2497 Vigna mungo HOM05D004363 ORTHO05D005110 5.5e-17 91.7 85 56.5
BcaNung06113 Brassica carinata HOM05D004363 ORTHO05D005110 7.1e-17 91.3 83 59.0
A03p07650 Brassica napus HOM05D004363 ORTHO05D005110 7.1e-17 91.3 83 60.2
C09p60760 Brassica napus HOM05D004363 ORTHO05D005110 7.1e-17 91.3 128 46.1
BolC9t58910H Brassica oleracea HOM05D004363 ORTHO05D005110 7.1e-17 91.3 83 59.0
Lalb_Chr01g0017831 Lupinus albus HOM05D004363 ORTHO05D005110 9.3e-17 90.9 83 55.4
TWI77G0878 Tripterygium wilfordii HOM05D004363 ORTHO05D005110 1.2e-16 90.5 83 59.0
CDE11G0453 Ceratophyllum demersum HOM05D004363 ORTHO05D005110 1.6e-16 90.1 85 54.1
C03p08890 Brassica napus HOM05D004363 ORTHO05D005110 2.1e-16 89.7 83 59.0
BolC3t13384H Brassica oleracea HOM05D004363 ORTHO05D005110 2.1e-16 89.7 83 59.0
Sp6g27880 Schrenkiella parvula HOM05D004363 ORTHO05D005110 2.7e-16 89.4 83 59.0
Phvul.001G196200 Phaseolus vulgaris HOM05D004363 ORTHO05D005110 3.5e-16 89.0 83 56.6
Glyma.03G202700 Glycine max HOM05D004363 ORTHO05D005110 6.1e-16 88.2 85 55.3
A10p22780 Brassica napus HOM05D004363 ORTHO05D005110 7.9e-16 87.8 74 62.2
BraA10t44344Z Brassica rapa HOM05D004363 ORTHO05D005110 7.9e-16 87.8 74 62.2
HPP92_013952 Vanilla planifolia HOM05D004363 ORTHO05D005110 5.1e-15 85.1 70 60.0
unitig_578.g15812 Utricularia gibba HOM05D004363 ORTHO05D005110 1.1e-14 84.0 81 54.3
Zm00001eb060010 Zea mays HOM05D004363 ORTHO05D005110 2.5e-14 82.8 126 41.3
SEGI_19509 Sequoiadendron giganteum HOM05D004363 ORTHO05D005110 9.7e-14 80.9 74 56.8
SEGI_03324 Sequoiadendron giganteum HOM05D004363 ORTHO05D005110 1.3e-13 80.5 74 56.8
Os03g0786900 Oryza sativa ssp. japonica HOM05D004363 ORTHO05D005110 3.7e-13 79.0 112 42.9
Pp3c6_8810 Physcomitrium patens HOM05D004363 ORTHO05D005110 6.3e-13 78.2 126 39.7
Actinidia03879 Actinidia chinensis HOM05D004363 ORTHO05D005110 4.1e-12 75.5 121 38.8
AagrBONN_evm.TU.Sc2ySwM_228.1566 Anthoceros agrestis HOM05D004363 ORTHO05D005110 5.3e-12 75.1 111 41.4
Mapoly0053s0062 Marchantia polymorpha HOM05D004363 ORTHO05D005110 6.9e-12 74.7 74 47.3
SMO196G0050 Selaginella moellendorffii HOM05D004363 ORTHO05D005110 1.6e-08 63.5 65 49.2
Ah.07g203630 Amaranthus hybridus HOM05D004363 ORTHO05D005110 2.7e-08 62.8 51 56.9


User provided reference genes

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