Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI08393 Sapria himalayana HOM05D001879 ORTHO05D007648 2.3e-180 635.6 349 100.0
Cfa013681 Carpinus fangiana HOM05D001879 ORTHO05D007648 3.1e-84 316.2 306 56.2
Atru.chr13.820 Acer truncatum HOM05D001879 ORTHO05D007648 4.0e-84 315.8 331 54.7
Cpa.g.sc142.15 Carica papaya HOM05D001879 ORTHO05D007648 4.4e-83 312.4 294 59.5
Sabra14G0010800 Salix brachista HOM05D001879 ORTHO05D007648 6.4e-82 308.5 345 51.6
Actinidia10192 Actinidia chinensis HOM05D001879 ORTHO05D007648 8.4e-82 308.1 346 51.4
Dinv44962 Davidia involucrata HOM05D001879 ORTHO05D007648 2.1e-80 303.5 294 55.8
Ciclev10003334m.g Citrus clementina HOM05D001879 ORTHO05D007648 3.5e-80 302.8 287 58.5
Potri.014G017000 Populus trichocarpa HOM05D001879 ORTHO05D007648 3.5e-80 302.8 302 55.0
Manes.05G181200 Manihot esculenta HOM05D001879 ORTHO05D007648 6.0e-80 302.0 332 51.2
CSS0015613 Camellia sinensis var. sinensis HOM05D001879 ORTHO05D007648 3.0e-79 299.7 310 54.5
Rhsim07G0220800 Rhododendron simsii HOM05D001879 ORTHO05D007648 1.5e-78 297.4 287 57.8
MELO3C016811.2 Cucumis melo HOM05D001879 ORTHO05D007648 7.3e-78 295.0 313 50.2
TWI56G1003 Tripterygium wilfordii HOM05D001879 ORTHO05D007648 7.3e-78 295.0 266 58.3
FvH4_2g33220 Fragaria vesca HOM05D001879 ORTHO05D007648 2.8e-77 293.1 325 48.0
TAR633G2582 Trochodendron aralioides HOM05D001879 ORTHO05D007648 6.2e-77 292.0 273 57.5
QL12p037902 Quercus lobata HOM05D001879 ORTHO05D007648 8.1e-77 291.6 249 63.1
Thecc.08G090000 Theobroma cacao HOM05D001879 ORTHO05D007648 1.8e-76 290.4 237 61.2
GSVIVG01009356001 Vitis vinifera HOM05D001879 ORTHO05D007648 1.8e-76 290.4 244 61.1
PGR031G1956 Punica granatum HOM05D001879 ORTHO05D007957 3.1e-76 289.7 250 60.8
CsaV3_4G034990 Cucumis sativus L. HOM05D001879 ORTHO05D007648 5.3e-76 288.9 305 50.5
RcHm_v2.0_Chr6g0309441 Rosa chinensis HOM05D001879 ORTHO05D007648 1.5e-75 287.3 259 56.4
FAN24G0874 Fragaria x ananassa HOM05D001879 ORTHO05D007648 2.6e-75 286.6 325 47.4
Nn5g30557 Nelumbo nucifera HOM05D001879 ORTHO05D007648 4.5e-75 285.8 282 55.0
Prupe.1G423900 Prunus persica HOM05D001879 ORTHO05D007648 4.5e-75 285.8 287 55.7
ClCG05G020550 Citrullus lanatus HOM05D001879 ORTHO05D007648 5.8e-75 285.4 338 47.3
FAN20G0949 Fragaria x ananassa HOM05D001879 ORTHO05D007648 1.3e-74 284.3 325 46.8
MD08G1086000 Malus domestica HOM05D001879 ORTHO05D007648 1.7e-74 283.9 248 58.9
Lsat_1_v5_gn_1_24340 Lactuca sativa HOM05D001879 ORTHO05D007648 1.4e-73 280.8 295 52.5
Gohir.D05G212700 Gossypium hirsutum HOM05D001879 ORTHO05D007648 5.4e-73 278.9 245 58.8
Cc10_g05690 Coffea canephora HOM05D001879 ORTHO05D007648 7.1e-73 278.5 258 56.6
Glyma.17G235900 Glycine max HOM05D001879 ORTHO05D007648 7.1e-73 278.5 308 48.7
DCAR_008854 Daucus carota HOM05D001879 ORTHO05D007648 2.7e-72 276.6 259 56.4
FAN27G0954 Fragaria x ananassa HOM05D001879 ORTHO05D007648 2.7e-72 276.6 332 45.2
Glyma.14G088600 Glycine max HOM05D001879 ORTHO05D007648 1.0e-71 274.6 297 52.9
Oeu022102.3 Olea europaea HOM05D001879 ORTHO05D007648 3.0e-71 273.1 295 54.2
FAN15G3244 Fragaria x ananassa HOM05D001879 ORTHO05D007648 6.7e-71 271.9 339 44.0
Phvul.001G026900 Phaseolus vulgaris HOM05D001879 ORTHO05D007648 6.7e-71 271.9 298 50.7
Lj4A759T48 Lonicera japonica HOM05D001879 ORTHO05D007648 1.9e-70 270.4 317 50.8
Lj5g0015061 Lotus japonicus HOM05D001879 ORTHO05D007648 1.9e-70 270.4 300 51.3
VMungo0647G0280 Vigna mungo HOM05D001879 ORTHO05D007648 7.4e-70 268.5 301 51.8
Medtr1g018350 Medicago truncatula HOM05D001879 ORTHO05D007648 1.3e-69 267.7 294 50.3
Ah.05g167110 Amaranthus hybridus HOM05D001879 ORTHO05D007957 2.1e-69 266.9 294 50.7
Nitab4.5_0003803g0020 Nicotiana tabacum HOM05D001879 ORTHO05D007648 2.1e-69 266.9 248 55.2
Gorai.009G219200 Gossypium raimondii HOM05D001879 ORTHO05D007648 6.2e-69 265.4 234 58.5
CDE06G0223 Ceratophyllum demersum HOM05D001879 ORTHO05D007648 8.1e-69 265.0 247 57.5
Nitab4.5_0000164g0150 Nicotiana tabacum HOM05D001879 ORTHO05D007648 1.4e-68 264.2 290 52.1
Sed0027780 Sechium edule HOM05D001879 ORTHO05D007648 1.8e-68 263.8 254 53.5
CANSAT25G1585 Cannabis sativa HOM05D001879 ORTHO05D007648 3.1e-68 263.1 288 49.3
Gohir.A05G209500 Gossypium hirsutum HOM05D001879 ORTHO05D007648 4.0e-68 262.7 234 58.1
COL.COLO4_28516 Corchorus olitorius HOM05D001879 ORTHO05D007957 9.0e-68 261.5 288 49.3
HPP92_019611 Vanilla planifolia HOM05D001879 ORTHO05D007648 1.5e-67 260.8 253 54.5
CiPaw.07G175900 Carya illinoinensis HOM05D001879 ORTHO05D007648 9.9e-67 258.1 218 62.8
TPR.G3779 Trifolium pratense HOM05D001879 ORTHO05D007648 9.9e-67 258.1 256 52.3
Sopen04g031540 Solanum pennellii HOM05D001879 ORTHO05D007648 1.7e-66 257.3 233 55.8
Psat6g016280 Pisum sativum HOM05D001879 ORTHO05D007648 2.2e-66 256.9 251 51.4
Ca_13228_v3 Cicer arietinum L. HOM05D001879 ORTHO05D007648 1.1e-65 254.6 297 47.5
AUR62038814 Chenopodium quinoa HOM05D001879 ORTHO05D007648 9.3e-65 251.5 236 55.5
arahy.Tifrunner.gnm1.ann1.0QZG7W Arachis hypogaea HOM05D001879 ORTHO05D007648 2.7e-64 250.0 248 51.2
AT1G27750 Arabidopsis thaliana HOM05D001879 ORTHO05D007648 3.5e-64 249.6 291 49.1
MSTRG.1026 Avicennia marina HOM05D001879 ORTHO05D007648 7.9e-64 248.4 247 53.8
ECA247G3074 Erigeron canadensis HOM05D001879 ORTHO05D007648 1.3e-63 247.7 271 49.4
EL10Ac1g02391 Beta vulgaris HOM05D001879 ORTHO05D007648 3.0e-63 246.5 243 53.5
Sc15g0005720 Simmondsia chinensis HOM05D001879 ORTHO05D007648 3.0e-63 246.5 236 56.4
arahy.Tifrunner.gnm1.ann1.6NC3R4 Arachis hypogaea HOM05D001879 ORTHO05D007648 3.9e-63 246.1 245 51.4
TAR381G0870 Trochodendron aralioides HOM05D001879 ORTHO05D007648 8.7e-63 245.0 236 56.4
AL1G41280 Arabidopsis lyrata HOM05D001879 ORTHO05D007648 1.9e-62 243.8 291 49.8
C05p26440 Brassica napus HOM05D001879 ORTHO05D007648 2.5e-62 243.4 290 47.2
BolC5t31365H Brassica oleracea HOM05D001879 ORTHO05D007648 2.5e-62 243.4 290 47.2
Ca_14462_v3 Cicer arietinum L. HOM05D001879 ORTHO05D000002 4.3e-62 242.7 273 48.7
Thhalv10006638m.g Eutrema salsugineum HOM05D001879 ORTHO05D007648 4.3e-62 242.7 290 48.3
BcaC05g26775 Brassica carinata HOM05D001879 ORTHO05D007648 2.1e-61 240.4 291 47.1
Aa31sc113G20 Aethionema arabicum HOM05D001879 ORTHO05D007648 3.7e-61 239.6 260 48.5
SGA_v2.0_scaffold238G43965 Striga asiatica HOM05D001879 ORTHO05D007648 3.7e-61 239.6 226 54.9
Lalb_Chr22g0355581 Lupinus albus HOM05D001879 ORTHO05D007648 1.4e-60 237.7 299 44.1
ATR0208G021 Amborella trichopoda HOM05D001879 ORTHO05D007648 1.8e-60 237.3 286 47.2
Haze_22324 Corylus avellana HOM05D001879 ORTHO05D007648 1.8e-60 237.3 256 50.8
A09p38350 Brassica napus HOM05D001879 ORTHO05D007648 3.1e-60 236.5 250 49.6
BraA09t39344Z Brassica rapa HOM05D001879 ORTHO05D007648 6.9e-60 235.3 250 49.6
Lalb_Chr24g0399421 Lupinus albus HOM05D001879 ORTHO05D007648 1.0e-58 231.5 282 45.4
SalBow7G0276 Salvia bowleyana HOM05D001879 ORTHO05D007648 2.2e-58 230.3 297 43.4
HanXRQChr08g0220641 Helianthus annuus HOM05D001879 ORTHO05D007648 4.9e-58 229.2 270 45.6
Sp1g23980 Schrenkiella parvula HOM05D001879 ORTHO05D007648 1.1e-57 228.0 291 45.7
Os01g0765200 Oryza sativa ssp. japonica HOM05D001879 ORTHO05D007648 4.2e-57 226.1 235 48.9
Carub.0001s2626 Capsella rubella HOM05D001879 ORTHO05D007648 2.8e-53 213.4 237 47.7
Hund24034 Selenicereus undatus HOM05D001879 ORTHO05D007648 2.0e-51 207.2 198 54.0
AUR62037434 Chenopodium quinoa HOM05D001879 ORTHO05D007648 8.5e-50 201.8 194 54.1
PSO017G6116 Papaver somniferum HOM05D001879 ORTHO05D007648 2.7e-48 196.8 190 54.7
Peaxi162Scf00081g01617 Petunia axillaris HOM05D001879 ORTHO05D007648 2.7e-48 196.8 194 53.1
Zm00001eb152180 Zea mays HOM05D001879 ORTHO05D007648 3.1e-44 183.3 231 43.3
SEGI_08589 Sequoiadendron giganteum HOM05D001879 ORTHO05D007648 1.5e-43 181.0 253 42.3
Ca_22944_v3 Cicer arietinum L. HOM05D001879 ORTHO05D007648 3.3e-38 163.3 216 44.0
Eucgr.F02258 Eucalyptus grandis HOM05D001879 ORTHO05D007648 4.5e-35 152.9 170 50.0
Aqoxy5G00884 Aquilegia oxysepala HOM05D001879 ORTHO05D007648 4.2e-33 146.4 170 48.2
Solyc04g077940.4 Solanum lycopersicum HOM05D001879 ORTHO05D007648 4.1e-28 129.8 190 40.0
Pp3c24_10810 Physcomitrium patens HOM05D001879 ORTHO05D007648 1.6e-24 117.9 249 29.7
Ca_31153_v3 Cicer arietinum L. HOM05D001879 ORTHO05D009627 2.2e-21 107.5 125 49.6
AL4G19860 Arabidopsis lyrata HOM05D001879 ORTHO05D007648 7.5e-14 82.4 121 38.0
Haze_22323 Corylus avellana HOM05D001879 ORTHO05D007648 8.3e-13 79.0 62 56.5
CBR_g6294 Chara braunii HOM05D001879 ORTHO05D007648 9.1e-12 75.5 129 31.0
BcaC06g35318 Brassica carinata HOM05D011004 ORTHO05D014493 1.3e-10 71.6 187 31.6
CBR_g6612 Chara braunii HOM05D001879 ORTHO05D007648 2.3e-10 70.9 112 33.9
BolC7t42255H Brassica oleracea HOM05D001879 ORTHO05D007648 1.5e-09 68.2 103 41.7
AL4G14580 Arabidopsis lyrata HOM05D031540 ORTHO05D014741 7.2e-09 65.9 63 57.1
AagrBONN_evm.TU.Sc2ySwM_117.1790 Anthoceros agrestis HOM05D001879 ORTHO05D007648 4.7e-08 63.2 190 27.9
Solyc04g077950.2 Solanum lycopersicum HOM05D001879 ORTHO05D007648 6.1e-08 62.8 44 63.6
SMO143G0029 Selaginella moellendorffii HOM05D001879 ORTHO05D007648 1.0e-07 62.0 235 24.7


User provided reference genes

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