Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI07931 Sapria himalayana HOM05D006833 ORTHO05D006885 3.2e-144 515.0 244 100.0
Potri.002G001000 Populus trichocarpa HOM05D006833 ORTHO05D006885 4.7e-39 165.6 224 42.4
Sabra02G0000900 Salix brachista HOM05D001427 ORTHO05D006885 1.2e-37 161.0 224 41.5
Cpa.g.sc36.86 Carica papaya HOM05D006833 ORTHO05D006885 3.5e-34 149.4 223 37.7
Manes.05G113300 Manihot esculenta HOM05D006833 ORTHO05D006885 7.8e-34 148.3 227 41.4
Dinv35492 Davidia involucrata HOM05D006833 ORTHO05D006885 1.3e-33 147.5 234 38.5
Potri.005G260100 Populus trichocarpa HOM05D006833 ORTHO05D006885 1.7e-33 147.1 226 39.4
GSVIVG01006875001 Vitis vinifera HOM05D006833 ORTHO05D006885 2.3e-33 146.7 240 38.3
CSS0009542 Camellia sinensis var. sinensis HOM05D006833 ORTHO05D006885 5.0e-33 145.6 223 39.0
MBI01_g32850_MAGBIO Magnolia biondii HOM05D006833 ORTHO05D006885 8.6e-33 144.8 231 38.1
Lj4A815T22 Lonicera japonica HOM05D006833 ORTHO05D006885 7.3e-32 141.7 218 36.2
Phvul.009G241600 Phaseolus vulgaris HOM05D006833 ORTHO05D006885 1.6e-31 140.6 221 38.9
arahy.Tifrunner.gnm1.ann1.36ZQJX Arachis hypogaea HOM05D006833 ORTHO05D006885 4.7e-31 139.0 218 39.9
Hma1.2p1_0493F.1_g165130 Hydrangea macrophylla HOM05D006833 ORTHO05D006885 1.0e-30 137.9 234 35.9
VMungo1309G0756 Vigna mungo HOM05D006833 ORTHO05D006885 1.0e-30 137.9 218 37.2
arahy.Tifrunner.gnm1.ann1.F7NAU0 Arachis hypogaea HOM05D006833 ORTHO05D006885 3.1e-30 136.3 217 39.2
Lj6g0016974 Lotus japonicus HOM05D006833 ORTHO05D006885 6.8e-30 135.2 219 37.0
Rhsim06G0000300 Rhododendron simsii HOM05D001427 ORTHO05D006885 6.8e-30 135.2 243 38.3
Sabra05G0201300 Salix brachista HOM05D006833 ORTHO05D006885 6.8e-30 135.2 221 37.6
Actinidia17104 Actinidia chinensis HOM05D006833 ORTHO05D006885 8.9e-30 134.8 227 37.0
Glyma.15G158500 Glycine max HOM05D006833 ORTHO05D006885 1.2e-29 134.4 215 37.2
HPP92_019647 Vanilla planifolia HOM05D006833 ORTHO05D006885 3.4e-29 132.9 212 41.0
Atru.chr4.1658 Acer truncatum HOM05D006833 ORTHO05D006885 4.4e-29 132.5 216 39.8
Glyma.09G052200 Glycine max HOM05D006833 ORTHO05D006885 4.4e-29 132.5 215 36.3
Duzib093G1949 Durio zibethinus HOM05D006833 ORTHO05D006885 7.5e-29 131.7 221 34.8
Lalb_Chr18g0052171 Lupinus albus HOM05D006833 ORTHO05D006885 7.5e-29 131.7 217 37.3
Thecc.08G096800 Theobroma cacao HOM05D006833 ORTHO05D006885 7.5e-29 131.7 223 36.8
DCAR_009847 Daucus carota HOM05D006833 ORTHO05D006885 9.8e-29 131.3 216 36.1
Gohir.A02G087001 Gossypium hirsutum HOM05D006833 ORTHO05D006885 9.8e-29 131.3 215 38.6
TWI60G0692 Tripterygium wilfordii HOM05D006833 ORTHO05D006885 9.8e-29 131.3 224 37.1
Eucgr.F01958 Eucalyptus grandis HOM05D006833 ORTHO05D006885 1.7e-28 130.6 227 37.9
TAR381G0829 Trochodendron aralioides HOM05D006833 ORTHO05D006885 1.7e-28 130.6 226 36.3
CiPaw.07G129500 Carya illinoinensis HOM05D006833 ORTHO05D006885 2.2e-28 130.2 226 34.1
CsaV3_6G035990 Cucumis sativus L. HOM05D006833 ORTHO05D006885 2.2e-28 130.2 214 39.3
Dinv05521 Davidia involucrata HOM05D006833 ORTHO05D006885 2.2e-28 130.2 237 36.3
TWI34G1134 Tripterygium wilfordii HOM05D006833 ORTHO05D006885 2.2e-28 130.2 244 37.3
Gohir.D02G101700 Gossypium hirsutum HOM05D006833 ORTHO05D006885 2.9e-28 129.8 215 37.7
Sopen01g002870 Solanum pennellii HOM05D006833 ORTHO05D006885 2.9e-28 129.8 221 38.5
RcHm_v2.0_Chr7g0217731 Rosa chinensis HOM05D006833 ORTHO05D006885 3.7e-28 129.4 222 37.4
COL.COLO4_16220 Corchorus olitorius HOM05D006833 ORTHO05D006885 6.4e-28 128.6 215 37.7
Gorai.005G115300 Gossypium raimondii HOM05D006833 ORTHO05D006885 6.4e-28 128.6 215 37.2
Lalb_Chr15g0083831 Lupinus albus HOM05D006833 ORTHO05D006885 8.3e-28 128.3 215 36.7
PGR083G0876 Punica granatum HOM05D006833 ORTHO05D006885 8.3e-28 128.3 238 34.9
Ciclev10000043m.g Citrus clementina HOM05D006833 ORTHO05D006885 1.4e-27 127.5 225 38.7
TPR.G1724 Trifolium pratense HOM05D006833 ORTHO05D006885 1.4e-27 127.5 214 34.6
Solyc01g006880.4 Solanum lycopersicum HOM05D006833 ORTHO05D006885 1.9e-27 127.1 221 38.0
vmacro13063 Vaccinium macrocarpon HOM05D006833 ORTHO05D006885 1.9e-27 127.1 232 36.2
Nn6g31535 Nelumbo nucifera HOM05D006833 ORTHO05D006885 2.4e-27 126.7 228 36.4
Cfa014175 Carpinus fangiana HOM05D006833 ORTHO05D006885 7.0e-27 125.2 214 35.0
MELO3C026511.2 Cucumis melo HOM05D006833 ORTHO05D006885 7.0e-27 125.2 212 39.2
QL02p016503 Quercus lobata HOM05D006833 ORTHO05D006885 9.2e-27 124.8 217 36.4
Haze_22899 Corylus avellana HOM05D006833 ORTHO05D006885 1.2e-26 124.4 224 33.5
Medtr2g036060 Medicago truncatula HOM05D006833 ORTHO05D006885 1.2e-26 124.4 218 36.7
Peaxi162Scf00675g00049 Petunia axillaris HOM05D006833 ORTHO05D006885 1.2e-26 124.4 214 34.1
ClCG08G009140 Citrullus lanatus HOM05D006833 ORTHO05D006885 1.6e-26 124.0 214 39.3
Ca_02003_v3 Cicer arietinum L. HOM05D006833 ORTHO05D006885 2.0e-26 123.6 216 35.2
PSO170G6410 Papaver somniferum HOM05D006833 ORTHO05D006885 2.0e-26 123.6 225 33.8
Aqoxy5G00920 Aquilegia oxysepala HOM05D006833 ORTHO05D006885 2.7e-26 123.2 227 36.6
PSO017G2707 Papaver somniferum HOM05D006833 ORTHO05D006885 4.6e-26 122.5 227 32.6
FAN04G0199 Fragaria x ananassa HOM05D006833 ORTHO05D006885 1.0e-25 121.3 226 34.1
FvH4_5g26810 Fragaria vesca HOM05D006833 ORTHO05D006885 2.3e-25 120.2 226 37.6
FAN18G3902 Fragaria x ananassa HOM05D006833 ORTHO05D006885 2.3e-25 120.2 226 37.6
FAN13G2656 Fragaria x ananassa HOM05D006833 ORTHO05D006885 3.0e-25 119.8 223 34.5
THA.LOC104801650 Tarenaya hassleriana HOM05D006833 ORTHO05D006885 3.0e-25 119.8 229 32.8
ATR0605G021 Amborella trichopoda HOM05D006833 ORTHO05D006885 3.9e-25 119.4 220 35.0
FAN08G1517 Fragaria x ananassa HOM05D006833 ORTHO05D006885 8.6e-25 118.2 223 34.1
Psat1g149680 Pisum sativum HOM05D006833 ORTHO05D006885 8.6e-25 118.2 225 33.3
Cc10_g00060 Coffea canephora HOM05D006833 ORTHO05D006885 1.9e-24 117.1 222 35.1
MD02G1278400 Malus domestica HOM05D006833 ORTHO05D006885 2.5e-24 116.7 212 34.9
Carub.0008s0676 Capsella rubella HOM05D006833 ORTHO05D006885 4.3e-24 115.9 215 34.0
Lsat_1_v5_gn_8_2261 Lactuca sativa HOM05D006833 ORTHO05D006885 4.3e-24 115.9 226 33.2
Prupe.2G042400 Prunus persica HOM05D006833 ORTHO05D006885 4.3e-24 115.9 219 35.6
CAN.G911.31 Capsicum annuum HOM05D006833 ORTHO05D006885 7.3e-24 115.2 211 33.6
MSTRG.24887 Avicennia marina HOM05D006833 ORTHO05D006885 1.2e-23 114.4 225 32.4
Nitab4.5_0007430g0010 Nicotiana tabacum HOM05D006833 ORTHO05D006885 1.6e-23 114.0 211 34.6
Oeu000732.1 Olea europaea HOM05D006833 ORTHO05D006885 2.1e-23 113.6 226 31.0
Sed0005718 Sechium edule HOM05D006833 ORTHO05D006885 2.1e-23 113.6 214 36.0
Nitab4.5_0000220g0010 Nicotiana tabacum HOM05D006833 ORTHO05D006885 2.8e-23 113.2 214 34.1
Sc08g0002330 Simmondsia chinensis HOM05D006833 ORTHO05D006885 2.8e-23 113.2 220 37.3
AL8G19090 Arabidopsis lyrata HOM05D006833 ORTHO05D006885 3.6e-23 112.8 215 33.5
HanXRQChr08g0226151 Helianthus annuus HOM05D006833 ORTHO05D006885 2.3e-22 110.2 211 36.5
ECA233G4915 Erigeron canadensis HOM05D006833 ORTHO05D006885 6.8e-22 108.6 219 33.8
SGA_v2.0_scaffold161G37836 Striga asiatica HOM05D006833 ORTHO05D006885 2.0e-21 107.1 211 32.7
AT5G42400 Arabidopsis thaliana HOM05D006833 ORTHO05D006885 2.6e-21 106.7 213 33.8
Hund06168 Selenicereus undatus HOM05D006833 ORTHO05D006885 5.8e-21 105.5 235 33.2
CDE08G1215 Ceratophyllum demersum HOM05D006833 ORTHO05D006885 1.3e-20 104.4 214 35.0
AUR62011705 Chenopodium quinoa HOM05D006833 ORTHO05D006885 1.3e-20 104.4 212 34.9
Thhalv10003132m.g Eutrema salsugineum HOM05D006833 ORTHO05D006885 1.3e-20 104.4 217 30.9
Sp7g08030 Schrenkiella parvula HOM05D006833 ORTHO05D006885 1.3e-20 104.4 212 34.0
EL10Ac9g21250 Beta vulgaris HOM05D006833 ORTHO05D006885 4.9e-20 102.4 219 31.1
CDE06G0375 Ceratophyllum demersum HOM05D006833 ORTHO05D006885 4.9e-20 102.4 214 31.8
BcaC04g21996 Brassica carinata HOM05D006833 ORTHO05D006885 8.3e-20 101.7 212 31.1
C09p25030 Brassica napus HOM05D006833 ORTHO05D006885 8.3e-20 101.7 212 31.1
CARHR285110 Cardamine hirsuta HOM05D006833 ORTHO05D006885 8.3e-20 101.7 214 34.1
Aa31LG9G12550 Aethionema arabicum HOM05D006833 ORTHO05D006885 1.1e-19 101.3 219 34.7
BcaB07g31077 Brassica carinata HOM05D006833 ORTHO05D006885 1.4e-19 100.9 212 32.5
BolC9t55397H Brassica oleracea HOM05D006833 ORTHO05D006885 1.9e-19 100.5 212 30.7
Migut.C00328 Erythranthe guttata HOM05D006833 ORTHO05D006885 1.9e-19 100.5 230 31.3
SalBow7G3917 Salvia bowleyana HOM05D006833 ORTHO05D006885 9.2e-19 98.2 228 30.3
unitig_46.g17973 Utricularia gibba HOM05D006833 ORTHO05D006885 2.1e-18 97.1 210 31.0
CANSAT25G3285 Cannabis sativa HOM05D006833 ORTHO05D006885 5.1e-17 92.4 211 33.2
A09p19670 Brassica napus HOM05D006833 ORTHO05D006885 6.6e-17 92.0 215 30.2
BraA09t37578Z Brassica rapa HOM05D006833 ORTHO05D006885 1.5e-16 90.9 215 30.2
Ah.01g023710 Amaranthus hybridus HOM05D006833 ORTHO05D006885 5.6e-16 89.0 230 30.0
AUR62012925 Chenopodium quinoa HOM05D006833 ORTHO05D006885 5.6e-16 89.0 107 44.9
Psat5g081960 Pisum sativum HOM05D002713 ORTHO05D008299 8.9e-14 81.6 57 61.4
Os12g0613200 Oryza sativa ssp. japonica HOM05D000590 ORTHO05D006885 2.6e-13 80.1 212 29.2
Zm00001eb406010 Zea mays HOM05D006833 ORTHO05D006885 3.4e-13 79.7 213 26.8
Psat5g082120 Pisum sativum HOM05D002713 ORTHO05D008299 9.2e-11 71.6 121 37.2
SEGI_04349 Sequoiadendron giganteum HOM05D000590 ORTHO05D006885 3.6e-07 59.7 50 56.0
Actinidia08363 Actinidia chinensis HOM05D006833 ORTHO05D006885 4.7e-07 59.3 72 43.1
Aqoxy1G00115 Aquilegia oxysepala HOM05D006833 ORTHO05D006885 6.8e-06 55.5 38 60.5


User provided reference genes

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