Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI07570 Sapria himalayana HOM05D001092 ORTHO05D000923 2.9e-64 248.4 127 100.0
Rhsim11G0008400 Rhododendron simsii HOM05D001092 ORTHO05D000923 1.3e-27 126.7 107 58.9
Lj2g0026983 Lotus japonicus HOM05D001092 ORTHO05D000923 1.6e-27 126.3 120 54.2
Atru.chr9.1144 Acer truncatum HOM05D001092 ORTHO05D000923 2.1e-27 125.9 100 59.0
arahy.Tifrunner.gnm1.ann1.G3NGVJ Arachis hypogaea HOM05D001092 ORTHO05D000923 2.1e-27 125.9 98 60.2
arahy.Tifrunner.gnm1.ann1.PHJ2IJ Arachis hypogaea HOM05D001092 ORTHO05D000923 2.1e-27 125.9 98 60.2
Actinidia25929 Actinidia chinensis HOM05D001092 ORTHO05D000923 6.2e-27 124.4 101 59.4
Medtr5g013780 Medicago truncatula HOM05D001092 ORTHO05D000923 6.2e-27 124.4 97 60.8
COL.COLO4_06705 Corchorus olitorius HOM05D001092 ORTHO05D000923 8.2e-27 124.0 103 57.3
CsaV3_3G049680 Cucumis sativus L. HOM05D001092 ORTHO05D000923 8.2e-27 124.0 98 59.2
Glyma.11G039900 Glycine max HOM05D001092 ORTHO05D000923 8.2e-27 124.0 120 51.7
TPR.G33938 Trifolium pratense HOM05D001092 ORTHO05D000923 8.2e-27 124.0 98 60.2
MELO3C003359.2 Cucumis melo HOM05D001092 ORTHO05D000923 1.1e-26 123.6 99 57.6
Gohir.A08G161600 Gossypium hirsutum HOM05D001092 ORTHO05D000923 1.1e-26 123.6 98 59.2
Gohir.D08G181600 Gossypium hirsutum HOM05D001092 ORTHO05D000923 1.1e-26 123.6 98 59.2
MD06G1043800 Malus domestica HOM05D001092 ORTHO05D000923 1.1e-26 123.6 103 59.2
Psat2g175240 Pisum sativum HOM05D001092 ORTHO05D000923 1.1e-26 123.6 98 60.2
Duzib205G0058 Durio zibethinus HOM05D001092 ORTHO05D000923 1.4e-26 123.2 98 59.2
Ciclev10018424m.g Citrus clementina HOM05D001092 ORTHO05D000923 1.8e-26 122.9 101 59.4
Nn1g00699 Nelumbo nucifera HOM05D001092 ORTHO05D000923 1.8e-26 122.9 98 58.2
Thecc.03G236900 Theobroma cacao HOM05D001092 ORTHO05D000923 1.8e-26 122.9 103 57.3
ClCG09G012520 Citrullus lanatus HOM05D001092 ORTHO05D000923 2.4e-26 122.5 98 58.2
Gorai.004G190500 Gossypium raimondii HOM05D001092 ORTHO05D000923 2.4e-26 122.5 98 59.2
Gohir.A03G003300 Gossypium hirsutum HOM05D001092 ORTHO05D000923 3.1e-26 122.1 97 60.8
Gohir.D03G169100 Gossypium hirsutum HOM05D001092 ORTHO05D000923 3.1e-26 122.1 97 60.8
Phvul.002G003000 Phaseolus vulgaris HOM05D001092 ORTHO05D000923 3.1e-26 122.1 120 51.7
PGR031G0629 Punica granatum HOM05D001092 ORTHO05D000923 3.1e-26 122.1 123 52.8
Eucgr.D02142 Eucalyptus grandis HOM05D001092 ORTHO05D000923 4.0e-26 121.7 101 58.4
TWI60G0589 Tripterygium wilfordii HOM05D001092 ORTHO05D000923 4.0e-26 121.7 96 59.4
Gorai.003G179200 Gossypium raimondii HOM05D001092 ORTHO05D000923 5.3e-26 121.3 97 60.8
Cfa012359 Carpinus fangiana HOM05D001092 ORTHO05D000923 6.9e-26 120.9 97 59.8
Haze_08330 Corylus avellana HOM05D001092 ORTHO05D000923 1.2e-25 120.2 100 58.0
HanXRQChr17g0535661 Helianthus annuus HOM05D001092 ORTHO05D000923 1.2e-25 120.2 120 49.2
TAR629G2120 Trochodendron aralioides HOM05D001092 ORTHO05D000923 1.2e-25 120.2 98 58.2
CiPaw.12G058300 Carya illinoinensis HOM05D001092 ORTHO05D000923 1.5e-25 119.8 98 60.2
Dinv28897 Davidia involucrata HOM05D001092 ORTHO05D000923 1.5e-25 119.8 98 56.1
Lsat_1_v5_gn_3_15901 Lactuca sativa HOM05D001092 ORTHO05D000923 1.5e-25 119.8 120 50.0
Manes.17G019783 Manihot esculenta HOM05D001092 ORTHO05D000923 1.5e-25 119.8 98 60.2
Prupe.5G050700 Prunus persica HOM05D001092 ORTHO05D000923 1.5e-25 119.8 120 52.5
Sed0007068 Sechium edule HOM05D001092 ORTHO05D000923 1.5e-25 119.8 98 57.1
VMungo1215G1951 Vigna mungo HOM05D001092 ORTHO05D000923 1.5e-25 119.8 120 50.0
Ca_26022_v3 Cicer arietinum L. HOM05D001092 ORTHO05D000923 2.0e-25 119.4 123 50.4
FvH4_5g20820 Fragaria vesca HOM05D001092 ORTHO05D000923 2.0e-25 119.4 103 56.3
FAN04G0578 Fragaria x ananassa HOM05D001092 ORTHO05D000923 2.0e-25 119.4 103 56.3
FAN08G1156 Fragaria x ananassa HOM05D001092 ORTHO05D000923 2.0e-25 119.4 103 56.3
FAN18G3751 Fragaria x ananassa HOM05D001092 ORTHO05D000923 2.0e-25 119.4 103 56.3
Lalb_Chr16g0379281 Lupinus albus HOM05D001092 ORTHO05D000923 2.0e-25 119.4 120 50.8
Aqoxy3G02588 Aquilegia oxysepala HOM05D001092 ORTHO05D000923 2.6e-25 119.0 100 57.0
CANSAT21G2480 Cannabis sativa HOM05D001092 ORTHO05D000923 2.6e-25 119.0 103 56.3
MD04G1057200 Malus domestica HOM05D001092 ORTHO05D000923 2.6e-25 119.0 102 57.8
QL12p007950 Quercus lobata HOM05D001092 ORTHO05D000923 2.6e-25 119.0 93 61.3
RcHm_v2.0_Chr7g0207821 Rosa chinensis HOM05D001092 ORTHO05D000923 2.6e-25 119.0 103 56.3
Carub.0007s2427 Capsella rubella HOM05D001092 ORTHO05D000923 3.4e-25 118.6 98 56.1
ECA246G3294 Erigeron canadensis HOM05D001092 ORTHO05D000923 5.8e-25 117.9 120 49.2
Sabra01G0118800 Salix brachista HOM05D001092 ORTHO05D000923 5.8e-25 117.9 96 61.5
THA.LOC104814451 Tarenaya hassleriana HOM05D001092 ORTHO05D000923 5.8e-25 117.9 98 55.1
GSVIVG01013270001 Vitis vinifera HOM05D001092 ORTHO05D000923 5.8e-25 117.9 98 57.1
Lj2A251G48 Lonicera japonica HOM05D001092 ORTHO05D000923 1.0e-24 117.1 98 56.1
Potri.001G148800 Populus trichocarpa HOM05D001092 ORTHO05D000923 1.0e-24 117.1 96 61.5
CAN.G1445.5 Capsicum annuum HOM05D001092 ORTHO05D000923 2.2e-24 115.9 98 55.1
SGA_v2.0_scaffold20G09243 Striga asiatica HOM05D001092 ORTHO05D000923 2.2e-24 115.9 98 58.2
AL7G37590 Arabidopsis lyrata HOM05D001092 ORTHO05D000923 2.9e-24 115.5 98 55.1
Nitab4.5_0001255g0080 Nicotiana tabacum HOM05D001092 ORTHO05D000923 2.9e-24 115.5 100 54.0
Ah.12g053800 Amaranthus hybridus HOM05D001092 ORTHO05D000923 3.8e-24 115.2 120 46.7
Nitab4.5_0006135g0030 Nicotiana tabacum HOM05D001092 ORTHO05D000923 3.8e-24 115.2 100 54.0
CARHR223710 Cardamine hirsuta HOM05D001092 ORTHO05D000923 6.5e-24 114.4 98 53.1
Thhalv10024176m.g Eutrema salsugineum HOM05D001092 ORTHO05D000923 6.5e-24 114.4 98 54.1
AUR62018801 Chenopodium quinoa HOM05D001092 ORTHO05D000923 1.1e-23 113.6 120 45.8
Cc08_g01550 Coffea canephora HOM05D001092 ORTHO05D000923 1.1e-23 113.6 103 53.4
DCAR_000729 Daucus carota HOM05D001092 ORTHO05D000923 1.1e-23 113.6 120 49.2
Migut.E00810 Erythranthe guttata HOM05D001092 ORTHO05D000923 1.4e-23 113.2 98 55.1
Solyc08g077500.4 Solanum lycopersicum HOM05D001092 ORTHO05D000923 1.4e-23 113.2 98 53.1
Sopen08g026080 Solanum pennellii HOM05D001092 ORTHO05D000923 1.4e-23 113.2 98 53.1
AUR62007201 Chenopodium quinoa HOM05D001092 ORTHO05D000923 1.9e-23 112.8 120 45.8
MBI04_g20743_MAGBIO Magnolia biondii HOM05D001092 ORTHO05D000923 2.5e-23 112.5 120 46.7
PSO063G3710 Papaver somniferum HOM05D001092 ORTHO05D000923 3.2e-23 112.1 98 51.0
AT4G17140 Arabidopsis thaliana HOM05D001092 ORTHO05D000923 4.2e-23 111.7 98 53.1
MSTRG.1961 Avicennia marina HOM05D001092 ORTHO05D000923 4.2e-23 111.7 98 56.1
EL10Ac5g12216 Beta vulgaris HOM05D001092 ORTHO05D000923 7.1e-23 110.9 96 52.1
Lsat_1_v5_gn_7_81100 Lactuca sativa HOM05D001092 ORTHO05D000923 1.6e-22 109.8 98 53.1
A08p12900 Brassica napus HOM05D001092 ORTHO05D000923 2.1e-22 109.4 98 51.0
BolC8t48437H Brassica oleracea HOM05D001092 ORTHO05D000923 2.1e-22 109.4 98 51.0
BraA08t33273Z Brassica rapa HOM05D001092 ORTHO05D000923 2.1e-22 109.4 98 51.0
Peaxi162Scf00084g00118 Petunia axillaris HOM05D001092 ORTHO05D000923 2.1e-22 109.4 100 52.0
Sc07g0008990 Simmondsia chinensis HOM05D001092 ORTHO05D000923 2.1e-22 109.4 98 52.0
Sp7g17050 Schrenkiella parvula HOM05D001092 ORTHO05D000923 2.7e-22 109.0 98 50.0
ATR0829G162 Amborella trichopoda HOM05D001092 ORTHO05D000923 4.6e-22 108.2 120 44.2
Aa31LG2G13220 Aethionema arabicum HOM05D001092 ORTHO05D000923 7.9e-22 107.5 98 50.0
Zm00001eb390790 Zea mays HOM05D001092 ORTHO05D000923 1.0e-21 107.1 103 49.5
Oeu007576.1 Olea europaea HOM05D001092 ORTHO05D000923 2.5e-20 102.4 85 55.3
unitig_21.g20375 Utricularia gibba HOM05D001092 ORTHO05D000923 2.5e-20 102.4 125 47.2
HPP92_014878 Vanilla planifolia HOM05D001092 ORTHO05D000923 5.7e-20 101.3 98 51.0
AagrBONN_evm.TU.Sc2ySwM_362.876 Anthoceros agrestis HOM05D001092 ORTHO05D000923 9.0e-18 94.0 99 47.5
HPP92_014884 Vanilla planifolia HOM05D001092 ORTHO05D000923 1.2e-17 93.6 81 54.3
CDE02G4159 Ceratophyllum demersum HOM05D001092 ORTHO05D000923 4.5e-17 91.7 93 47.3
Mapoly0105s0039 Marchantia polymorpha HOM05D001092 ORTHO05D000923 6.5e-16 87.8 99 43.4
Pp3c22_21110 Physcomitrium patens HOM05D001092 ORTHO05D000923 1.1e-15 87.0 99 43.4
SEGI_02242 Sequoiadendron giganteum HOM05D001092 ORTHO05D000923 2.5e-15 85.9 108 41.7
Pp3c18_1370 Physcomitrium patens HOM05D001092 ORTHO05D000923 1.9e-12 76.3 99 39.4
Pp3c18_1376 Physcomitrium patens HOM05D001092 ORTHO05D000923 1.9e-12 76.3 99 39.4
Cpa.g.sc98.48 Carica papaya HOM05D001092 ORTHO05D000923 1.3e-08 63.5 44 68.2
CSS0044917 Camellia sinensis var. sinensis HOM05D001092 ORTHO05D000923 6.5e-08 61.2 84 44.0
SEGI_19754 Sequoiadendron giganteum HOM05D001092 ORTHO05D000923 3.2e-07 58.9 112 30.4
SEGI_28116 Sequoiadendron giganteum HOM05D001092 ORTHO05D000923 3.2e-07 58.9 112 30.4
Actinidia03407 Actinidia chinensis HOM05D001092 ORTHO05D000923 1.6e-06 56.6 50 54.0


User provided reference genes

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