Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI05717 Sapria himalayana HOM05D006341 ORTHO05D000377 0.0e+00 1144.0 558 100.0
Ciclev10028267m.g Citrus clementina HOM05D006341 ORTHO05D000377 4.1e-155 552.4 511 56.2
Gohir.A12G038400 Gossypium hirsutum HOM05D006341 ORTHO05D000377 7.7e-154 548.1 494 57.1
Atru.chr5.3271 Acer truncatum HOM05D006341 ORTHO05D000377 1.3e-153 547.4 496 57.5
Manes.11G082657 Manihot esculenta HOM05D006341 ORTHO05D000377 2.2e-153 546.6 509 56.2
COL.COLO4_17298 Corchorus olitorius HOM05D006341 ORTHO05D000377 2.9e-153 546.2 499 55.5
Gohir.D12G033900 Gossypium hirsutum HOM05D006341 ORTHO05D000377 5.0e-153 545.4 494 56.7
CSS0004411 Camellia sinensis var. sinensis HOM05D006341 ORTHO05D000377 8.5e-153 544.7 511 55.6
Duzib132G0346 Durio zibethinus HOM05D006341 ORTHO05D000377 1.1e-152 544.3 499 55.3
Gorai.008G034900 Gossypium raimondii HOM05D006341 ORTHO05D000377 2.5e-152 543.1 500 56.0
Dinv04950 Davidia involucrata HOM05D006341 ORTHO05D000377 4.2e-152 542.3 510 55.7
Sabra04G0114400 Salix brachista HOM05D006341 ORTHO05D000377 9.4e-152 541.2 510 55.1
Thecc.02G064100 Theobroma cacao HOM05D006341 ORTHO05D000377 1.4e-150 537.3 499 55.1
Potri.004G172100 Populus trichocarpa HOM05D006341 ORTHO05D000377 3.9e-150 535.8 511 55.0
TAR381G0106 Trochodendron aralioides HOM05D006341 ORTHO05D000377 3.9e-150 535.8 509 55.2
Prupe.8G162700 Prunus persica HOM05D006341 ORTHO05D000377 1.1e-149 534.3 507 55.0
MD05G1118100 Malus domestica HOM05D006341 ORTHO05D000377 1.5e-149 533.9 507 54.0
Nn7g37263 Nelumbo nucifera HOM05D006341 ORTHO05D000377 1.5e-149 533.9 508 54.5
RcHm_v2.0_Chr6g0244411 Rosa chinensis HOM05D006341 ORTHO05D000377 1.7e-148 530.4 500 54.2
COL.COLO4_17179 Corchorus olitorius HOM05D006341 ORTHO05D000377 2.8e-148 529.6 484 55.4
QL11p049167 Quercus lobata HOM05D006341 ORTHO05D000377 4.8e-148 528.9 492 54.9
TWI53G1223 Tripterygium wilfordii HOM05D006341 ORTHO05D000377 6.3e-148 528.5 509 54.4
vmacro02264 Vaccinium macrocarpon HOM05D006341 ORTHO05D000377 1.4e-147 527.3 548 52.9
Atru.chr5.3277 Acer truncatum HOM05D006341 ORTHO05D000377 3.1e-147 526.2 485 56.5
Hma1.2p1_0032F.1_g019570 Hydrangea macrophylla HOM05D006341 ORTHO05D000377 9.1e-147 524.6 513 52.6
CANSAT25G3024 Cannabis sativa HOM05D006341 ORTHO05D000377 1.6e-146 523.9 504 54.2
RcHm_v2.0_Chr6g0244441 Rosa chinensis HOM05D006341 ORTHO05D000377 4.5e-146 522.3 501 53.5
FvH4_2g01620 Fragaria vesca HOM05D006341 ORTHO05D000377 1.3e-145 520.8 501 53.9
Lj4g0012983 Lotus japonicus HOM05D006341 ORTHO05D000377 3.8e-145 519.2 496 53.6
Haze_02174 Corylus avellana HOM05D006341 ORTHO05D000377 1.5e-144 517.3 501 54.1
PGR042G0052 Punica granatum HOM05D006341 ORTHO05D000377 1.5e-144 517.3 489 55.8
Haze_02181 Corylus avellana HOM05D006341 ORTHO05D000377 4.2e-144 515.8 501 53.9
TPR.G31245 Trifolium pratense HOM05D006341 ORTHO05D000377 4.2e-144 515.8 512 52.0
Psat7g085760 Pisum sativum HOM05D006341 ORTHO05D000377 2.1e-143 513.5 509 51.7
Actinidia00608 Actinidia chinensis HOM05D006341 ORTHO05D000377 1.0e-142 511.1 487 55.4
CsaV3_7G000880 Cucumis sativus L. HOM05D006341 ORTHO05D000377 8.8e-142 508.1 506 52.6
Cc06_g16120 Coffea canephora HOM05D006341 ORTHO05D000377 1.2e-141 507.7 509 51.1
Migut.B00102 Erythranthe guttata HOM05D006341 ORTHO05D000377 1.7e-140 503.8 498 52.4
Lsat_1_v5_gn_8_124961 Lactuca sativa HOM05D006341 ORTHO05D000377 1.7e-140 503.8 490 51.8
Oeu006673.1 Olea europaea HOM05D006341 ORTHO05D000377 2.8e-140 503.1 510 52.2
Glyma.08G087700 Glycine max HOM05D006341 ORTHO05D000377 4.8e-140 502.3 505 52.1
EL10Ac9g21414 Beta vulgaris HOM05D006341 ORTHO05D000377 1.4e-139 500.7 527 50.7
Aqoxy5G01641 Aquilegia oxysepala HOM05D006341 ORTHO05D000377 1.8e-139 500.4 495 53.7
C04p50300 Brassica napus HOM05D006341 ORTHO05D000377 2.4e-139 500.0 475 54.5
BolC4t26628H Brassica oleracea HOM05D006341 ORTHO05D000377 2.4e-139 500.0 475 54.5
MBI02_g27965_MAGBIO Magnolia biondii HOM05D006341 ORTHO05D000377 3.1e-139 499.6 495 53.5
Sopen01g042030 Solanum pennellii HOM05D006341 ORTHO05D000377 9.1e-139 498.0 508 51.0
A04p15870 Brassica napus HOM05D006341 ORTHO05D000377 1.2e-138 497.7 478 53.6
BraA04t17219Z Brassica rapa HOM05D006341 ORTHO05D000377 1.6e-138 497.3 475 53.9
CAN.G134.236 Capsicum annuum HOM05D006341 ORTHO05D000377 1.6e-138 497.3 500 50.6
Ca_18243_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 1.6e-138 497.3 505 50.9
Solyc01g098460.4 Solanum lycopersicum HOM05D006341 ORTHO05D000377 2.0e-138 496.9 508 51.0
BcaB06g27766 Brassica carinata HOM05D006341 ORTHO05D000377 2.7e-138 496.5 475 54.1
SalBow1G4312 Salvia bowleyana HOM05D006341 ORTHO05D000377 2.7e-138 496.5 511 51.7
Thhalv10000146m.g Eutrema salsugineum HOM05D006341 ORTHO05D000377 5.9e-138 495.4 507 52.1
THA.LOC104807791 Tarenaya hassleriana HOM05D006341 ORTHO05D000377 1.3e-137 494.2 513 51.5
SGA_v2.0_scaffold58G20406 Striga asiatica HOM05D006341 ORTHO05D000377 1.7e-137 493.8 487 52.2
AT2G21070 Arabidopsis thaliana HOM05D006341 ORTHO05D000377 1.1e-136 491.1 500 53.4
Peaxi162Scf00434g00625 Petunia axillaris HOM05D006341 ORTHO05D000377 1.1e-136 491.1 500 50.6
arahy.Tifrunner.gnm1.ann1.MR7L4V Arachis hypogaea HOM05D006341 ORTHO05D000377 1.5e-136 490.7 509 50.9
Hund06416 Selenicereus undatus HOM05D006341 ORTHO05D000377 1.5e-136 490.7 530 50.2
arahy.Tifrunner.gnm1.ann1.UN7M5W Arachis hypogaea HOM05D006341 ORTHO05D000377 2.5e-136 490.0 508 51.2
AUR62010072 Chenopodium quinoa HOM05D006341 ORTHO05D000377 5.5e-136 488.8 511 50.3
Carub.0003s3491 Capsella rubella HOM05D006341 ORTHO05D000377 9.4e-136 488.0 502 52.4
HanXRQChr17g0553851 Helianthus annuus HOM05D006341 ORTHO05D000377 2.7e-135 486.5 473 52.4
Nitab4.5_0001423g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 6.1e-135 485.3 510 49.6
FAN20G2467 Fragaria x ananassa HOM05D006341 ORTHO05D000377 1.4e-134 484.2 457 54.3
AL4G10160 Arabidopsis lyrata HOM05D006341 ORTHO05D000377 1.8e-134 483.8 498 53.0
CARHR111910 Cardamine hirsuta HOM05D006341 ORTHO05D000377 2.3e-134 483.4 491 53.4
Aa31LG7G15600 Aethionema arabicum HOM05D006341 ORTHO05D000377 3.0e-134 483.0 489 52.8
Sp4g00210 Schrenkiella parvula HOM05D006341 ORTHO05D000377 8.8e-134 481.5 518 51.4
Glyma.05G133200 Glycine max HOM05D006341 ORTHO05D000377 2.0e-133 480.3 504 50.6
MSTRG.16892 Avicennia marina HOM05D006341 ORTHO05D000377 3.4e-133 479.6 514 50.2
FAN24G0408 Fragaria x ananassa HOM05D006341 ORTHO05D000377 3.4e-133 479.6 457 54.0
CDE05G1540 Ceratophyllum demersum HOM05D006341 ORTHO05D000377 2.8e-132 476.5 509 50.1
ECA233G1460 Erigeron canadensis HOM05D006341 ORTHO05D000377 2.4e-131 473.4 464 53.0
Rhsim11G0190600 Rhododendron simsii HOM05D006341 ORTHO05D000377 4.1e-131 472.6 521 51.1
Lj5A183G92 Lonicera japonica HOM05D006341 ORTHO05D000377 9.1e-131 471.5 479 54.1
Dinv39489 Davidia involucrata HOM05D006341 ORTHO05D000377 1.2e-130 471.1 481 52.2
MELO3C013369.2 Cucumis melo HOM05D006341 ORTHO05D000377 2.7e-130 469.9 467 52.7
VMungo0251G3227 Vigna mungo HOM05D006341 ORTHO05D000377 1.3e-129 467.6 471 51.6
Os02g0121200 Oryza sativa ssp. japonica HOM05D006341 ORTHO05D000377 1.7e-129 467.2 484 50.8
Eucgr.G01768 Eucalyptus grandis HOM05D006341 ORTHO05D000377 1.1e-128 464.5 511 48.9
Sed0009186 Sechium edule HOM05D006341 ORTHO05D000377 1.9e-128 463.8 439 55.1
Lalb_Chr13g0293551 Lupinus albus HOM05D006341 ORTHO05D000377 4.2e-128 462.6 535 46.7
Sc08g0003080 Simmondsia chinensis HOM05D006341 ORTHO05D000377 4.2e-128 462.6 520 49.6
GSVIVG01024058001 Vitis vinifera HOM05D006341 ORTHO05D000377 2.8e-127 459.9 477 51.8
ATR0810G159 Amborella trichopoda HOM05D006341 ORTHO05D000377 4.7e-127 459.1 509 47.7
unitig_60.g25823 Utricularia gibba HOM05D006341 ORTHO05D000377 4.7e-127 459.1 493 49.3
Nitab4.5_0001903g0070 Nicotiana tabacum HOM05D006341 ORTHO05D000377 3.0e-126 456.4 469 50.3
HPP92_014019 Vanilla planifolia HOM05D006341 ORTHO05D000377 1.1e-123 448.0 502 47.4
Ah.01g008830 Amaranthus hybridus HOM05D006341 ORTHO05D000377 1.4e-123 447.6 494 49.2
ClCG02G004230 Citrullus lanatus HOM05D006341 ORTHO05D000377 3.5e-122 443.0 529 48.0
SEGI_13829 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 8.9e-118 428.3 539 44.7
SEGI_22420 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 4.4e-117 426.0 529 45.0
Phvul.002G189600 Phaseolus vulgaris HOM05D006341 ORTHO05D000377 9.8e-117 424.9 461 49.9
Potri.009G131700 Populus trichocarpa HOM05D006341 ORTHO05D000377 9.2e-107 391.7 326 60.1
QL11p048584 Quercus lobata HOM05D006341 ORTHO05D000377 7.8e-106 388.7 438 49.1
Cpa.g.sc37.173 Carica papaya HOM05D006341 ORTHO05D000377 6.2e-103 379.0 474 46.8
AagrBONN_evm.TU.Sc2ySwM_228.2682 Anthoceros agrestis HOM05D006341 ORTHO05D000377 2.0e-101 374.0 483 44.3
Mapoly0085s0033 Marchantia polymorpha HOM05D006341 ORTHO05D000377 4.9e-100 369.4 560 39.1
Zm00001eb208320 Zea mays HOM05D006341 ORTHO05D000377 1.9e-99 367.5 397 49.4
Pp3c8_21040 Physcomitrium patens HOM05D006341 ORTHO05D000377 8.6e-97 358.6 553 39.2
SMO169G0079 Selaginella moellendorffii HOM05D006341 ORTHO05D000377 4.2e-91 339.7 459 43.6
Ca_18241_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 4.0e-86 323.2 410 43.7
Atru.chr5.3221 Acer truncatum HOM05D006341 ORTHO05D000377 3.4e-85 320.1 322 52.8
CiPaw.06G124100 Carya illinoinensis HOM05D006341 ORTHO05D000377 3.9e-81 306.6 366 48.6
Nitab4.5_0008354g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 3.6e-79 300.1 355 46.8
Carub.0004s0010 Capsella rubella HOM05D006341 ORTHO05D000377 1.7e-76 291.2 500 38.4
Sabra09G0102100 Salix brachista HOM05D006341 ORTHO05D000377 1.9e-59 234.6 303 45.2
FAN22G0308 Fragaria x ananassa HOM05D003409 ORTHO05D004015 1.0e-57 228.8 278 45.7
MCO01G168 Micromonas commoda HOM05D006341 ORTHO05D000377 3.3e-56 223.8 304 39.5
PGSC0003DMG401028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 4.5e-53 213.4 140 65.7
Cre01.g044150 Chlamydomonas reinhardtii HOM05D006341 ORTHO05D000377 3.8e-52 210.3 392 33.2
PRCOL_00006207 Prasinoderma coloniale HOM05D006341 ORTHO05D000377 2.0e-40 171.4 355 32.4
CBR_g23939 Chara braunii HOM05D006341 ORTHO05D000377 4.4e-32 143.7 227 37.4
SHI02026 Sapria himalayana HOM05D039686 ORTHO05D000002 4.2e-27 127.1 74 90.5
PGSC0003DMG402028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 4.0e-25 120.6 151 45.7
FAN07G1625 Fragaria x ananassa HOM05D006341 ORTHO05D000377 5.2e-25 120.2 127 50.4
SHI07955 Sapria himalayana HOM05D039686 ORTHO05D000002 8.8e-25 119.4 69 89.9
SHI05835 Sapria himalayana HOM05D039686 ORTHO05D000002 3.4e-24 117.5 71 87.3
Actinidia20497 Actinidia chinensis HOM05D006341 ORTHO05D000377 2.8e-23 114.4 78 66.7
Oeu063293.1 Olea europaea HOM05D006341 ORTHO05D000377 1.6e-18 98.6 176 36.9
FAN07G2354 Fragaria x ananassa HOM05D006341 ORTHO05D000377 2.0e-08 65.1 129 35.7
Atru.chr5.3222 Acer truncatum HOM05D006341 ORTHO05D000377 8.3e-07 59.7 117 34.2


User provided reference genes

Program Settings