Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI05701 Sapria himalayana HOM05D004110 ORTHO05D004810 0.0e+00 1184.1 597 100.0
Potri.009G130000 Populus trichocarpa HOM05D004110 ORTHO05D004810 7.0e-145 518.5 602 48.5
Sabra09G0099400 Salix brachista HOM05D004110 ORTHO05D004810 1.8e-140 503.8 602 48.2
Manes.04G077900 Manihot esculenta HOM05D004110 ORTHO05D004810 2.9e-135 486.5 603 46.4
Duzib248G0147 Durio zibethinus HOM05D004110 ORTHO05D004810 4.1e-129 466.1 606 45.0
Thecc.02G066600 Theobroma cacao HOM05D004110 ORTHO05D004810 2.9e-127 459.9 604 44.5
Prupe.8G161000 Prunus persica HOM05D004110 ORTHO05D004810 9.5e-126 454.9 611 45.2
Dinv04965 Davidia involucrata HOM05D004110 ORTHO05D004810 2.1e-125 453.8 603 44.9
RcHm_v2.0_Chr6g0245151 Rosa chinensis HOM05D004110 ORTHO05D004810 3.6e-125 453.0 613 45.0
Gorai.008G034000 Gossypium raimondii HOM05D004110 ORTHO05D004810 8.0e-125 451.8 604 44.9
Actinidia29167 Actinidia chinensis HOM05D004110 ORTHO05D004810 5.2e-124 449.1 613 44.0
Gohir.A12G039200 Gossypium hirsutum HOM05D004110 ORTHO05D004810 6.8e-124 448.7 604 44.5
CSS0024884 Camellia sinensis var. sinensis HOM05D004110 ORTHO05D004810 1.2e-123 448.0 613 43.7
Cfa005187 Carpinus fangiana HOM05D004110 ORTHO05D004810 1.5e-123 447.6 607 44.6
CiPaw.06G125000 Carya illinoinensis HOM05D004110 ORTHO05D004810 3.4e-123 446.4 608 44.2
Gohir.D12G033200 Gossypium hirsutum HOM05D004110 ORTHO05D004810 9.8e-123 444.9 604 44.4
MD05G1116500 Malus domestica HOM05D004110 ORTHO05D004810 3.7e-122 443.0 612 44.1
TWI79G0689 Tripterygium wilfordii HOM05D004110 ORTHO05D004810 1.9e-121 440.7 608 43.3
QL11p047649 Quercus lobata HOM05D004110 ORTHO05D004810 9.2e-121 438.3 613 43.6
Rhsim05G0062900 Rhododendron simsii HOM05D004110 ORTHO05D004810 1.3e-119 434.5 612 42.5
Ciclev10027667m.g Citrus clementina HOM05D004110 ORTHO05D004810 3.0e-119 433.3 609 43.5
Cpa.g.sc37.187 Carica papaya HOM05D004110 ORTHO05D004810 1.9e-118 430.6 608 42.6
vmacro17377 Vaccinium macrocarpon HOM05D004110 ORTHO05D004810 1.9e-118 430.6 607 42.2
arahy.Tifrunner.gnm1.ann1.5454UR Arachis hypogaea HOM05D004110 ORTHO05D004810 3.3e-118 429.9 602 43.2
arahy.Tifrunner.gnm1.ann1.6KB8MN Arachis hypogaea HOM05D004110 ORTHO05D004810 5.6e-118 429.1 602 43.0
FAN15G2714 Fragaria x ananassa HOM05D004110 ORTHO05D004810 3.6e-117 426.4 605 42.8
CANSAT25G3021 Cannabis sativa HOM05D004110 ORTHO05D004810 4.7e-117 426.0 597 42.4
FvH4_2g01950 Fragaria vesca HOM05D004110 ORTHO05D004810 3.1e-116 423.3 605 42.5
Glyma.12G024600 Glycine max HOM05D004110 ORTHO05D004810 6.8e-116 422.2 607 43.7
FAN20G3101 Fragaria x ananassa HOM05D004110 ORTHO05D004810 8.9e-116 421.8 605 42.3
Psat7g138160 Pisum sativum HOM05D004110 ORTHO05D004810 8.9e-116 421.8 605 42.3
FAN24G2945 Fragaria x ananassa HOM05D004110 ORTHO05D004810 1.2e-115 421.4 605 42.5
GSVIVG01024075001 Vitis vinifera HOM05D004110 ORTHO05D004810 1.2e-115 421.4 596 43.6
Lalb_Chr01g0001341 Lupinus albus HOM05D004110 ORTHO05D004810 2.0e-115 420.6 605 43.0
Ca_30033_v3 Cicer arietinum L. HOM05D004110 ORTHO05D004810 2.6e-115 420.2 609 42.7
PGR142G1237 Punica granatum HOM05D004110 ORTHO05D004810 2.9e-114 416.8 605 41.0
Medtr4g075330 Medicago truncatula HOM05D004110 ORTHO05D004810 1.9e-113 414.1 606 42.6
TPR.G17192 Trifolium pratense HOM05D004110 ORTHO05D004810 1.6e-112 411.0 603 42.1
Phvul.011G026800 Phaseolus vulgaris HOM05D004110 ORTHO05D004810 2.1e-112 410.6 608 41.3
Lj3g0009405 Lotus japonicus HOM05D004110 ORTHO05D004810 7.8e-112 408.7 602 42.5
Lj5C184G3 Lonicera japonica HOM05D004110 ORTHO05D004810 2.3e-111 407.1 613 40.5
Haze_02193 Corylus avellana HOM05D004110 ORTHO05D004810 2.1e-109 400.6 605 41.2
Eucgr.I01378 Eucalyptus grandis HOM05D004110 ORTHO05D004810 4.0e-108 396.4 618 40.5
Migut.B00121 Erythranthe guttata HOM05D004110 ORTHO05D004810 1.7e-106 391.0 608 37.8
ECA234G0434 Erigeron canadensis HOM05D004110 ORTHO05D004810 1.2e-104 384.8 593 38.4
TAR376G1212 Trochodendron aralioides HOM05D004110 ORTHO05D004810 1.2e-104 384.8 612 40.8
Sopen11g016530 Solanum pennellii HOM05D004110 ORTHO05D004810 1.0e-103 381.7 608 39.0
BraA06t27759Z Brassica rapa HOM05D004110 ORTHO05D004810 5.1e-103 379.4 605 39.5
A06p48910 Brassica napus HOM05D004110 ORTHO05D004810 8.6e-103 378.6 605 39.5
Cc02_g16480 Coffea canephora HOM05D004110 ORTHO05D004810 8.6e-103 378.6 603 38.6
Ca_19005_v3 Cicer arietinum L. HOM05D004110 ORTHO05D004810 1.1e-102 378.3 623 39.5
C07p63600 Brassica napus HOM05D004110 ORTHO05D004810 1.5e-102 377.9 605 39.2
BolC7t46773H Brassica oleracea HOM05D004110 ORTHO05D004810 1.5e-102 377.9 605 39.2
Solyc11g039880.2 Solanum lycopersicum HOM05D004110 ORTHO05D004810 1.5e-102 377.9 608 38.7
MBI05_g07505_MAGBIO Magnolia biondii HOM05D004110 ORTHO05D004810 1.9e-102 377.5 612 40.0
Nitab4.5_0006590g0010 Nicotiana tabacum HOM05D004110 ORTHO05D004810 2.5e-102 377.1 606 39.1
Sc18g0006650 Simmondsia chinensis HOM05D004110 ORTHO05D004810 3.3e-102 376.7 612 39.5
MSTRG.20018 Avicennia marina HOM05D004110 ORTHO05D004810 5.6e-102 375.9 610 38.5
Carub.0007s0061 Capsella rubella HOM05D004110 ORTHO05D004810 3.6e-101 373.2 603 39.1
CsaV3_2G015750 Cucumis sativus L. HOM05D004110 ORTHO05D004810 1.1e-100 371.7 595 39.3
DCAR_022780 Daucus carota HOM05D004110 ORTHO05D004810 1.8e-100 370.9 613 38.8
CAN.G603.1 Capsicum annuum HOM05D004110 ORTHO05D004810 5.2e-100 369.4 607 37.9
EL10Ac9g21435 Beta vulgaris HOM05D004110 ORTHO05D004810 6.8e-100 369.0 595 37.0
AL7G10630 Arabidopsis lyrata HOM05D004110 ORTHO05D004810 8.9e-100 368.6 603 39.1
MELO3C020789.2 Cucumis melo HOM05D004110 ORTHO05D004810 1.5e-99 367.9 596 38.8
Thhalv10024188m.g Eutrema salsugineum HOM05D004110 ORTHO05D004810 2.0e-99 367.5 607 38.2
Sed0006799 Sechium edule HOM05D004110 ORTHO05D004810 2.6e-99 367.1 605 39.0
Nitab4.5_0007580g0010 Nicotiana tabacum HOM05D004110 ORTHO05D004810 3.4e-99 366.7 635 37.8
Sp7g37050 Schrenkiella parvula HOM05D004110 ORTHO05D004810 3.4e-99 366.7 602 38.2
Aa31LG6G16440 Aethionema arabicum HOM05D004110 ORTHO05D004810 4.4e-99 366.3 594 38.4
Nn5g29099 Nelumbo nucifera HOM05D004110 ORTHO05D004810 5.8e-99 365.9 613 39.5
CARHR294450 Cardamine hirsuta HOM05D004110 ORTHO05D004810 2.9e-98 363.6 604 38.4
ClCG02G011600 Citrullus lanatus HOM05D004110 ORTHO05D004810 6.4e-98 362.5 572 39.7
THA.LOC104824773 Tarenaya hassleriana HOM05D004110 ORTHO05D004810 6.4e-98 362.5 605 39.7
Peaxi162Scf00684g00023 Petunia axillaris HOM05D004110 ORTHO05D004810 1.1e-97 361.7 563 40.0
AT4G38760 Arabidopsis thaliana HOM05D004110 ORTHO05D004810 1.6e-96 357.8 602 37.4
Aqoxy2G01068 Aquilegia oxysepala HOM05D004110 ORTHO05D004810 3.3e-94 350.1 618 37.7
Ah.01g022610 Amaranthus hybridus HOM05D004110 ORTHO05D004810 4.3e-94 349.7 596 36.9
AUR62010090 Chenopodium quinoa HOM05D004110 ORTHO05D004810 2.1e-93 347.4 601 35.6
PSO541G0713 Papaver somniferum HOM05D004110 ORTHO05D004810 2.8e-93 347.1 618 37.7
PSO675G3689 Papaver somniferum HOM05D004110 ORTHO05D004810 2.8e-93 347.1 621 38.0
Hund00042 Selenicereus undatus HOM05D004110 ORTHO05D004810 3.6e-93 346.7 576 37.3
AUR62013086 Chenopodium quinoa HOM05D004110 ORTHO05D004810 8.1e-93 345.5 604 35.9
HanXRQChr10g0299011 Helianthus annuus HOM05D004110 ORTHO05D004810 1.1e-92 345.1 582 36.8
SGA_v2.0_scaffold58G20427 Striga asiatica HOM05D004110 ORTHO05D004810 6.9e-92 342.4 604 36.4
FAN27G1057 Fragaria x ananassa HOM05D004110 ORTHO05D004810 2.1e-85 320.9 507 40.2
Potri.004G168700 Populus trichocarpa HOM05D004110 ORTHO05D004810 4.9e-82 309.7 570 38.1
unitig_21.g20818 Utricularia gibba HOM05D004110 ORTHO05D004810 3.2e-81 307.0 585 35.4
Os10g0154600 Oryza sativa ssp. japonica HOM05D004110 ORTHO05D004810 1.8e-76 291.2 610 33.6
ATR0810G267 Amborella trichopoda HOM05D004110 ORTHO05D004810 4.0e-76 290.0 598 34.3
BcaNung01969 Brassica carinata HOM05D004110 ORTHO05D004810 9.0e-76 288.9 572 35.1
Lsat_1_v5_gn_4_74700 Lactuca sativa HOM05D004110 ORTHO05D004810 9.9e-75 285.4 577 33.3
Zm00001eb026650 Zea mays HOM05D004110 ORTHO05D004810 1.2e-72 278.5 592 33.6
Glyma.11G098600 Glycine max HOM05D004110 ORTHO05D004810 1.8e-71 274.6 409 44.0
COL.COLO4_17262 Corchorus olitorius HOM05D004110 ORTHO05D004810 2.3e-63 247.7 375 40.5
SEGI_22669 Sequoiadendron giganteum HOM05D004110 ORTHO05D004810 4.8e-61 240.0 480 35.8
Oeu014463.1 Olea europaea HOM05D004110 ORTHO05D004810 2.4e-60 237.7 334 40.4
MD10G1119600 Malus domestica HOM05D004110 ORTHO05D004810 5.5e-57 226.5 395 38.2
Mapoly0001s0208 Marchantia polymorpha HOM05D004110 ORTHO05D004810 4.1e-44 183.7 512 29.5
Pp3c5_12360 Physcomitrium patens HOM05D004110 ORTHO05D004810 1.2e-43 182.2 643 26.0
SMO171G0108 Selaginella moellendorffii HOM05D004110 ORTHO05D004810 5.2e-39 166.8 471 28.0
AagrBONN_evm.TU.Sc2ySwM_344.4164 Anthoceros agrestis HOM05D004110 ORTHO05D004810 1.3e-37 162.2 478 26.2
HPP92_005015 Vanilla planifolia HOM05D004110 ORTHO05D004810 8.3e-29 132.9 411 27.7
CBR_g5647 Chara braunii HOM05D004110 ORTHO05D004810 3.4e-22 110.9 332 25.6
FAN27G2584 Fragaria x ananassa HOM05D004110 ORTHO05D004810 7.0e-20 103.2 136 48.5
Lj3g0004699 Lotus japonicus HOM05D004110 ORTHO05D004810 4.4e-14 84.0 88 51.1
PGSC0003DMG400022052 Solanum tuberosum HOM05D004110 ORTHO05D004810 2.4e-12 78.2 63 57.1
BcaB03g12223 Brassica carinata HOM05D004110 ORTHO05D004810 5.0e-10 70.5 84 47.6


User provided reference genes

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