Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI05695 Sapria himalayana HOM05D004110 ORTHO05D004810 7.1e-220 766.9 375 100.0
MD05G1116500 Malus domestica HOM05D004110 ORTHO05D004810 8.9e-13 79.0 96 47.9
SGA_v2.0_scaffold58G20427 Striga asiatica HOM05D004110 ORTHO05D004810 9.8e-12 75.5 99 47.5
Manes.04G077900 Manihot esculenta HOM05D004110 ORTHO05D004810 1.7e-11 74.7 96 51.0
Lj5C184G3 Lonicera japonica HOM05D004110 ORTHO05D004810 4.9e-11 73.2 124 42.7
TAR376G1212 Trochodendron aralioides HOM05D004110 ORTHO05D004810 8.3e-11 72.4 96 43.8
SHI13205 Sapria himalayana HOM05D000105 ORTHO05D000023 1.4e-10 71.6 75 54.7
MBI05_g07505_MAGBIO Magnolia biondii HOM05D004110 ORTHO05D004810 2.4e-10 70.9 86 43.0
SHI11950 Sapria himalayana HOM05D000105 ORTHO05D000023 3.2e-10 70.5 53 64.2
CiPaw.06G125000 Carya illinoinensis HOM05D004110 ORTHO05D004810 5.4e-10 69.7 94 47.9
GSVIVG01024075001 Vitis vinifera HOM05D004110 ORTHO05D004810 1.2e-09 68.6 96 43.8
PGR142G1237 Punica granatum HOM05D004110 ORTHO05D004810 1.6e-09 68.2 121 42.1
RcHm_v2.0_Chr6g0245151 Rosa chinensis HOM05D004110 ORTHO05D004810 2.7e-09 67.4 95 47.4
MSTRG.20018 Avicennia marina HOM05D004110 ORTHO05D004810 3.5e-09 67.0 118 39.8
DCAR_022780 Daucus carota HOM05D004110 ORTHO05D004810 4.6e-09 66.6 94 41.5
Cfa005187 Carpinus fangiana HOM05D004110 ORTHO05D004810 6.0e-09 66.2 113 41.6
ECA234G0434 Erigeron canadensis HOM05D004110 ORTHO05D004810 6.0e-09 66.2 96 45.8
HanXRQChr10g0299011 Helianthus annuus HOM05D004110 ORTHO05D004810 6.0e-09 66.2 96 45.8
Rhsim05G0062900 Rhododendron simsii HOM05D004110 ORTHO05D004810 6.0e-09 66.2 98 43.9
FvH4_2g01950 Fragaria vesca HOM05D004110 ORTHO05D004810 7.8e-09 65.9 95 46.3
FAN24G2945 Fragaria x ananassa HOM05D004110 ORTHO05D004810 7.8e-09 65.9 95 46.3
Dinv04965 Davidia involucrata HOM05D004110 ORTHO05D004810 1.0e-08 65.5 124 39.5
TPR.G17192 Trifolium pratense HOM05D004110 ORTHO05D004810 1.0e-08 65.5 103 42.7
Actinidia29167 Actinidia chinensis HOM05D004110 ORTHO05D004810 1.3e-08 65.1 100 45.0
FAN15G2714 Fragaria x ananassa HOM05D004110 ORTHO05D004810 1.3e-08 65.1 97 45.4
FAN20G3101 Fragaria x ananassa HOM05D004110 ORTHO05D004810 1.3e-08 65.1 97 45.4
Prupe.8G161000 Prunus persica HOM05D004110 ORTHO05D004810 1.3e-08 65.1 96 43.8
SHI27749 Sapria himalayana HOM05D000105 ORTHO05D010518 1.7e-08 64.7 51 64.7
Sed0006799 Sechium edule HOM05D004110 ORTHO05D004810 1.7e-08 64.7 97 43.3
Oeu014463.1 Olea europaea HOM05D004110 ORTHO05D004810 2.3e-08 64.3 117 41.0
Sopen11g016530 Solanum pennellii HOM05D004110 ORTHO05D004810 3.0e-08 63.9 121 36.4
Migut.B00121 Erythranthe guttata HOM05D004110 ORTHO05D004810 3.9e-08 63.5 97 44.3
SHI24083 Sapria himalayana HOM05D000105 ORTHO05D000023 8.6e-08 62.4 57 57.9
Hund00042 Selenicereus undatus HOM05D004110 ORTHO05D004810 8.6e-08 62.4 116 35.3
Aqoxy2G01068 Aquilegia oxysepala HOM05D004110 ORTHO05D004810 1.1e-07 62.0 94 38.3
Psat7g138160 Pisum sativum HOM05D004110 ORTHO05D004810 1.1e-07 62.0 101 42.6
Solyc11g039880.2 Solanum lycopersicum HOM05D004110 ORTHO05D004810 1.1e-07 62.0 121 36.4
SHI36616 Sapria himalayana HOM05D000105 ORTHO05D000023 1.5e-07 61.6 76 48.7
CANSAT25G3021 Cannabis sativa HOM05D004110 ORTHO05D004810 1.9e-07 61.2 124 38.7
Ciclev10027667m.g Citrus clementina HOM05D004110 ORTHO05D004810 1.9e-07 61.2 100 44.0
Lsat_1_v5_gn_4_74700 Lactuca sativa HOM05D004110 ORTHO05D004810 1.9e-07 61.2 121 36.4
SHI04527 Sapria himalayana HOM05D000105 ORTHO05D000023 1.9e-07 61.2 151 30.5
TWI79G0689 Tripterygium wilfordii HOM05D004110 ORTHO05D004810 1.9e-07 61.2 96 40.6
Peaxi162Scf00684g00023 Petunia axillaris HOM05D004110 ORTHO05D004810 3.3e-07 60.5 125 35.2
SHI22426 Sapria himalayana HOM05D000105 ORTHO05D000023 3.3e-07 60.5 118 36.4
SHI30249 Sapria himalayana HOM05D000105 ORTHO05D000023 3.3e-07 60.5 58 56.9
Lalb_Chr01g0001341 Lupinus albus HOM05D004110 ORTHO05D004810 4.3e-07 60.1 120 40.0
Thecc.02G066600 Theobroma cacao HOM05D004110 ORTHO05D004810 4.3e-07 60.1 95 42.1
SHI18428 Sapria himalayana HOM05D000105 ORTHO05D000023 5.6e-07 59.7 66 48.5
Lj3g0009405 Lotus japonicus HOM05D004110 ORTHO05D004810 7.3e-07 59.3 99 42.4
SHI00287 Sapria himalayana HOM05D000105 ORTHO05D009988 7.3e-07 59.3 61 52.5
SHI12557 Sapria himalayana HOM05D000105 ORTHO05D000023 7.3e-07 59.3 58 56.9
SHI32980 Sapria himalayana HOM05D000105 ORTHO05D000007 7.3e-07 59.3 60 58.3
SHI16974 Sapria himalayana HOM05D000105 ORTHO05D000023 9.5e-07 58.9 60 51.7
SHI01337 Sapria himalayana HOM05D000105 ORTHO05D000023 1.2e-06 58.5 62 51.6
SHI07082 Sapria himalayana HOM05D000105 ORTHO05D000023 1.2e-06 58.5 64 46.9
SHI13125 Sapria himalayana HOM05D000105 ORTHO05D000023 1.2e-06 58.5 64 46.9
SHI35835 Sapria himalayana HOM05D000105 ORTHO05D000023 1.2e-06 58.5 52 57.7
Medtr4g075330 Medicago truncatula HOM05D004110 ORTHO05D004810 1.6e-06 58.2 97 42.3
SHI30413 Sapria himalayana HOM05D000105 ORTHO05D000023 1.6e-06 58.2 60 53.3
Cpa.g.sc37.187 Carica papaya HOM05D004110 ORTHO05D004810 2.1e-06 57.8 96 42.7
AUR62013086 Chenopodium quinoa HOM05D004110 ORTHO05D004810 2.1e-06 57.8 94 35.1
Sabra09G0099400 Salix brachista HOM05D004110 ORTHO05D004810 2.1e-06 57.8 97 39.2
SHI12589 Sapria himalayana HOM05D000105 ORTHO05D000023 2.1e-06 57.8 58 56.9
SHI25368 Sapria himalayana HOM05D000105 ORTHO05D000023 2.1e-06 57.8 60 53.3
SHI34224 Sapria himalayana HOM05D000105 ORTHO05D000023 2.1e-06 57.8 58 55.2
SHI34828 Sapria himalayana HOM05D000105 ORTHO05D000023 2.1e-06 57.8 182 30.8
SHI48586 Sapria himalayana HOM05D000105 ORTHO05D000023 2.1e-06 57.8 81 42.0
Sc18g0006650 Simmondsia chinensis HOM05D004110 ORTHO05D004810 2.1e-06 57.8 98 35.7
Ca_19005_v3 Cicer arietinum L. HOM05D004110 ORTHO05D004810 2.8e-06 57.4 97 40.2
Ca_30033_v3 Cicer arietinum L. HOM05D004110 ORTHO05D004810 2.8e-06 57.4 97 40.2
SHI10081 Sapria himalayana HOM05D000105 ORTHO05D000023 2.8e-06 57.4 83 41.0
SHI13016 Sapria himalayana HOM05D000105 ORTHO05D000023 2.8e-06 57.4 64 51.6
SHI33216 Sapria himalayana HOM05D000105 ORTHO05D000023 2.8e-06 57.4 60 55.0
Gohir.D12G033200 Gossypium hirsutum HOM05D004110 ORTHO05D004810 3.6e-06 57.0 95 41.1
Gorai.008G034000 Gossypium raimondii HOM05D004110 ORTHO05D004810 3.6e-06 57.0 95 41.1
PSO541G0713 Papaver somniferum HOM05D004110 ORTHO05D004810 3.6e-06 57.0 94 36.2
PSO675G3689 Papaver somniferum HOM05D004110 ORTHO05D004810 3.6e-06 57.0 94 36.2
SHI03200 Sapria himalayana HOM05D000105 ORTHO05D000023 3.6e-06 57.0 60 51.7
SHI10634 Sapria himalayana HOM05D000105 ORTHO05D000023 3.6e-06 57.0 60 53.3
SHI23076 Sapria himalayana HOM05D000105 ORTHO05D000023 3.6e-06 57.0 79 46.8
CsaV3_2G015750 Cucumis sativus L. HOM05D004110 ORTHO05D004810 4.7e-06 56.6 96 39.6
Phvul.011G026800 Phaseolus vulgaris HOM05D004110 ORTHO05D004810 4.7e-06 56.6 98 40.8
SHI01885 Sapria himalayana HOM05D000105 ORTHO05D000023 4.7e-06 56.6 60 51.7
SHI02045 Sapria himalayana HOM05D000105 ORTHO05D000023 4.7e-06 56.6 64 48.4
SHI05635 Sapria himalayana HOM05D000105 ORTHO05D000023 4.7e-06 56.6 58 53.4
SHI07440 Sapria himalayana HOM05D000105 ORTHO05D000023 4.7e-06 56.6 64 51.6
SHI25502 Sapria himalayana HOM05D000105 ORTHO05D000023 4.7e-06 56.6 58 53.4
Gohir.A12G039200 Gossypium hirsutum HOM05D004110 ORTHO05D004810 6.2e-06 56.2 94 39.4
SHI05621 Sapria himalayana HOM05D000105 ORTHO05D000023 6.2e-06 56.2 64 46.9
SHI06779 Sapria himalayana HOM05D000105 ORTHO05D000023 6.2e-06 56.2 65 46.2
SHI08446 Sapria himalayana HOM05D000105 ORTHO05D000023 6.2e-06 56.2 64 48.4
SHI14415 Sapria himalayana HOM05D000105 ORTHO05D003797 6.2e-06 56.2 53 52.8
SHI44482 Sapria himalayana HOM05D000105 ORTHO05D000023 6.2e-06 56.2 60 56.7
SHI01990 Sapria himalayana HOM05D000105 ORTHO05D000023 8.1e-06 55.8 60 55.0
SHI02524 Sapria himalayana HOM05D000105 ORTHO05D000023 8.1e-06 55.8 64 45.3
SHI10178 Sapria himalayana HOM05D000105 ORTHO05D000023 8.1e-06 55.8 60 53.3
SHI16982 Sapria himalayana HOM05D000105 ORTHO05D000023 8.1e-06 55.8 64 45.3
SHI21957 Sapria himalayana HOM05D000105 ORTHO05D000023 8.1e-06 55.8 70 50.0
SHI23869 Sapria himalayana HOM05D000105 ORTHO05D000023 8.1e-06 55.8 60 55.0
SHI28341 Sapria himalayana HOM05D000105 ORTHO05D000023 8.1e-06 55.8 62 50.0
SHI28377 Sapria himalayana HOM05D000105 ORTHO05D000023 8.1e-06 55.8 66 50.0
SHI38000 Sapria himalayana HOM05D000105 ORTHO05D000023 8.1e-06 55.8 66 43.9
SHI53708 Sapria himalayana HOM05D000105 ORTHO05D000023 8.1e-06 55.8 59 52.5


User provided reference genes

Program Settings