Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI05660 Sapria himalayana HOM05D000070 ORTHO05D002524 2.1e-97 359.0 180 100.0
SHI05664 Sapria himalayana HOM05D000070 ORTHO05D002524 5.2e-19 98.6 102 55.9
SHI02672 Sapria himalayana HOM05D000070 ORTHO05D002524 2.2e-17 93.2 102 54.9
SHI54823 Sapria himalayana HOM05D000070 ORTHO05D002524 1.4e-16 90.5 102 52.9
SHI35510 Sapria himalayana HOM05D000070 ORTHO05D000722 3.2e-16 89.4 92 55.4
Potri.013G151600 Populus trichocarpa HOM05D000070 ORTHO05D002524 3.1e-11 72.8 64 56.2
Sabra13G0121900 Salix brachista HOM05D000070 ORTHO05D002524 3.1e-11 72.8 64 56.2
MSTRG.376 Avicennia marina HOM05D000070 ORTHO05D002524 4.0e-11 72.4 67 52.2
Duzib268G0862 Durio zibethinus HOM05D000070 ORTHO05D002524 4.0e-11 72.4 64 54.7
SalBow3G3279 Salvia bowleyana HOM05D000070 ORTHO05D002524 4.0e-11 72.4 64 53.1
Migut.F01759 Erythranthe guttata HOM05D000070 ORTHO05D002524 5.2e-11 72.0 64 53.1
Hma1.2p1_1026F.1_g249430 Hydrangea macrophylla HOM05D000070 ORTHO05D002524 5.2e-11 72.0 64 54.7
Hund06844 Selenicereus undatus HOM05D000070 ORTHO05D002524 5.2e-11 72.0 95 40.0
HanXRQChr05g0137571 Helianthus annuus HOM05D000070 ORTHO05D002524 6.8e-11 71.6 64 54.7
QL03p008255 Quercus lobata HOM05D000070 ORTHO05D002524 8.9e-11 71.2 64 54.7
QL05p070020 Quercus lobata HOM05D000070 ORTHO05D002524 8.9e-11 71.2 64 54.7
MSTRG.8146 Avicennia marina HOM05D000070 ORTHO05D002524 1.2e-10 70.9 64 53.1
Duzib268G1032 Durio zibethinus HOM05D000070 ORTHO05D002524 1.2e-10 70.9 64 53.1
Phvul.006G215100 Phaseolus vulgaris HOM05D000070 ORTHO05D002524 1.2e-10 70.9 64 51.6
Atru.chr1.3802 Acer truncatum HOM05D000070 ORTHO05D002524 1.5e-10 70.5 64 51.6
Ciclev10000344m.g Citrus clementina HOM05D000070 ORTHO05D002524 1.5e-10 70.5 64 51.6
Manes.12G079001 Manihot esculenta HOM05D000070 ORTHO05D002524 1.5e-10 70.5 100 43.0
PGR031G0461 Punica granatum HOM05D000070 ORTHO05D002524 1.5e-10 70.5 64 53.1
Actinidia30902 Actinidia chinensis HOM05D000070 ORTHO05D002524 2.0e-10 70.1 64 51.6
ECA240G1122 Erigeron canadensis HOM05D000070 ORTHO05D002524 2.0e-10 70.1 64 53.1
Eucgr.H03858 Eucalyptus grandis HOM05D000070 ORTHO05D002524 2.0e-10 70.1 64 53.1
Hma1.2p1_0071F.1_g037950 Hydrangea macrophylla HOM05D000070 ORTHO05D002524 2.0e-10 70.1 64 53.1
Nitab4.5_0000316g0150 Nicotiana tabacum HOM05D000070 ORTHO05D002524 2.0e-10 70.1 64 51.6
TWI75G0007 Tripterygium wilfordii HOM05D000070 ORTHO05D002524 2.0e-10 70.1 64 51.6
Actinidia05741 Actinidia chinensis HOM05D000070 ORTHO05D002524 2.6e-10 69.7 64 51.6
Gohir.A13G129300 Gossypium hirsutum HOM05D000070 ORTHO05D002524 2.6e-10 69.7 64 51.6
Gohir.D13G132500 Gossypium hirsutum HOM05D000070 ORTHO05D002524 2.6e-10 69.7 64 51.6
Gorai.013G148700 Gossypium raimondii HOM05D000070 ORTHO05D002524 2.6e-10 69.7 64 51.6
Thecc.04G181900 Theobroma cacao HOM05D000070 ORTHO05D002524 2.6e-10 69.7 64 51.6
CSS0003865 Camellia sinensis var. sinensis HOM05D000070 ORTHO05D002524 3.4e-10 69.3 64 53.1
CiPaw.06G146900 Carya illinoinensis HOM05D000070 ORTHO05D002524 3.4e-10 69.3 64 53.1
CSS0033851 Camellia sinensis var. sinensis HOM05D000070 ORTHO05D002524 4.4e-10 68.9 64 51.6
CSS0050014 Camellia sinensis var. sinensis HOM05D000070 ORTHO05D002524 4.4e-10 68.9 64 51.6
MELO3C020977.2 Cucumis melo HOM05D000070 ORTHO05D002524 4.4e-10 68.9 64 53.1
CsaV3_4G030490 Cucumis sativus L. HOM05D000070 ORTHO05D002524 4.4e-10 68.9 64 53.1
Glyma.08G186800 Glycine max HOM05D000070 ORTHO05D002524 4.4e-10 68.9 91 41.8
Lsat_1_v5_gn_4_41860 Lactuca sativa HOM05D000070 ORTHO05D002524 4.4e-10 68.9 64 51.6
PGR102G1451 Punica granatum HOM05D000070 ORTHO05D002524 4.4e-10 68.9 64 50.0
Thecc.07G003400 Theobroma cacao HOM05D000070 ORTHO05D002524 4.4e-10 68.9 64 51.6
Aqoxy1G01986 Aquilegia oxysepala HOM05D000070 ORTHO05D002524 5.8e-10 68.6 63 50.8
CANSAT21G1470 Cannabis sativa HOM05D000070 ORTHO05D002524 5.8e-10 68.6 62 53.2
Cfa019778 Carpinus fangiana HOM05D000070 ORTHO05D002524 5.8e-10 68.6 64 50.0
COL.COLO4_19635 Corchorus olitorius HOM05D000070 ORTHO05D002524 5.8e-10 68.6 64 50.0
Nitab4.5_0006307g0030 Nicotiana tabacum HOM05D000070 ORTHO05D002524 5.8e-10 68.6 62 51.6
Rhsim07G0177400 Rhododendron simsii HOM05D000070 ORTHO05D002524 5.8e-10 68.6 64 51.6
Sed0015610 Sechium edule HOM05D000070 ORTHO05D002524 5.8e-10 68.6 64 51.6
Sed0026597 Sechium edule HOM05D000070 ORTHO05D002524 5.8e-10 68.6 64 51.6
TAR383G0972 Trochodendron aralioides HOM05D000070 ORTHO05D002524 5.8e-10 68.6 63 52.4
ATR0824G087 Amborella trichopoda HOM05D000070 ORTHO05D002524 7.5e-10 68.2 100 37.0
CANSAT78G0982 Cannabis sativa HOM05D000070 ORTHO05D002524 7.5e-10 68.2 64 51.6
COL.COLO4_11662 Corchorus olitorius HOM05D000070 ORTHO05D009193 7.5e-10 68.2 64 50.0
DCAR_029293 Daucus carota HOM05D000070 ORTHO05D002524 7.5e-10 68.2 64 53.1
Dinv15381 Davidia involucrata HOM05D000070 ORTHO05D002524 7.5e-10 68.2 64 51.6
Lj3g0025379 Lotus japonicus HOM05D000070 ORTHO05D002524 7.5e-10 68.2 64 50.0
Lalb_Chr20g0123471 Lupinus albus HOM05D000070 ORTHO05D002524 7.5e-10 68.2 64 51.6
Prupe.3G135900 Prunus persica HOM05D000070 ORTHO05D002524 7.5e-10 68.2 64 53.1
Solyc01g068330.4 Solanum lycopersicum HOM05D000070 ORTHO05D002524 7.5e-10 68.2 64 50.0
Sopen01g030300 Solanum pennellii HOM05D000070 ORTHO05D002524 7.5e-10 68.2 64 50.0
PGSC0003DMG400017956 Solanum tuberosum HOM05D000070 ORTHO05D002524 7.5e-10 68.2 64 50.0
CAN.G410.45 Capsicum annuum HOM05D000070 ORTHO05D002524 9.8e-10 67.8 64 50.0
Cc02_g33740 Coffea canephora HOM05D000070 ORTHO05D002524 9.8e-10 67.8 64 51.6
Prupe.4G275000 Prunus persica HOM05D000070 ORTHO05D002524 9.8e-10 67.8 64 51.6
MBI06_g25717_MAGBIO Magnolia biondii HOM05D000070 ORTHO05D002524 1.3e-09 67.4 63 50.8
Nn7g37080 Nelumbo nucifera HOM05D000070 ORTHO05D002524 1.3e-09 67.4 63 50.8
MD17G1241700 Malus domestica HOM05D000070 ORTHO05D002524 1.7e-09 67.0 64 51.6
HPP92_012136 Vanilla planifolia HOM05D000070 ORTHO05D000722 1.7e-09 67.0 63 50.8
ECA234G0955 Erigeron canadensis HOM05D000070 ORTHO05D002524 2.2e-09 66.6 63 52.4
MD09G1249100 Malus domestica HOM05D000070 ORTHO05D002524 2.2e-09 66.6 64 50.0
Sc08g0000180 Simmondsia chinensis HOM05D000070 ORTHO05D002524 2.9e-09 66.2 64 50.0
MELO3C012901.2 Cucumis melo HOM05D000070 ORTHO05D002524 3.7e-09 65.9 64 51.6
Lj9A552T69 Lonicera japonica HOM05D000070 ORTHO05D002524 3.7e-09 65.9 64 50.0
CDE10G0494 Ceratophyllum demersum HOM05D000070 ORTHO05D002524 4.9e-09 65.5 63 50.8
CDE10G0519 Ceratophyllum demersum HOM05D000070 ORTHO05D002524 4.9e-09 65.5 63 50.8
THA.LOC104824096 Tarenaya hassleriana HOM05D000070 ORTHO05D002524 6.4e-09 65.1 64 48.4
vmacro05054 Vaccinium macrocarpon HOM05D000070 ORTHO05D002524 6.4e-09 65.1 64 50.0
PSO229G0063 Papaver somniferum HOM05D000070 ORTHO05D002524 8.3e-09 64.7 62 51.6
PSO675G6540 Papaver somniferum HOM05D000070 ORTHO05D002524 8.3e-09 64.7 62 51.6
Zm00001eb327120 Zea mays HOM05D000070 ORTHO05D002524 8.3e-09 64.7 63 49.2
Cpa.g.sc0.174 Carica papaya HOM05D000070 ORTHO05D002524 1.1e-08 64.3 63 47.6
PSO541G1387 Papaver somniferum HOM05D000070 ORTHO05D002524 1.1e-08 64.3 62 50.0
PSO675G6398 Papaver somniferum HOM05D000070 ORTHO05D002524 1.1e-08 64.3 62 50.0
Aa31LG11G9220 Aethionema arabicum HOM05D000070 ORTHO05D002524 1.4e-08 63.9 71 46.5
Haze_01698 Corylus avellana HOM05D000070 ORTHO05D002524 1.4e-08 63.9 66 48.5
FvH4_2g31390 Fragaria vesca HOM05D000070 ORTHO05D002524 1.4e-08 63.9 95 38.9
FAN24G1231 Fragaria x ananassa HOM05D000070 ORTHO05D002524 1.4e-08 63.9 95 38.9
GSVIVG01010343001 Vitis vinifera HOM05D000070 ORTHO05D002524 1.4e-08 63.9 64 48.4
CANSAT56G1545 Cannabis sativa HOM05D000070 ORTHO05D002524 1.9e-08 63.5 62 50.0
arahy.Tifrunner.gnm1.ann1.E36TJY Arachis hypogaea HOM05D000070 ORTHO05D002524 2.4e-08 63.2 63 47.6
Cpa.g.sc96.52 Carica papaya HOM05D000070 ORTHO05D002524 2.4e-08 63.2 63 47.6
FAN15G2302 Fragaria x ananassa HOM05D000070 ORTHO05D002524 2.4e-08 63.2 62 50.0
FAN20G2442 Fragaria x ananassa HOM05D000070 ORTHO05D002524 2.4e-08 63.2 62 50.0
FAN27G3411 Fragaria x ananassa HOM05D000070 ORTHO05D002524 2.4e-08 63.2 62 50.0
Oeu041108.1 Olea europaea HOM05D000070 ORTHO05D002524 2.4e-08 63.2 64 46.9
RcHm_v2.0_Chr6g0311431 Rosa chinensis HOM05D000070 ORTHO05D002524 2.4e-08 63.2 62 50.0
SHI52140 Sapria himalayana HOM05D000070 ORTHO05D002524 2.4e-08 63.2 74 50.0
PGSC0003DMG400006034 Solanum tuberosum HOM05D000070 ORTHO05D002524 2.4e-08 63.2 64 45.3
CSS0017128 Camellia sinensis var. sinensis HOM05D000070 ORTHO05D000722 3.2e-08 62.8 85 45.9
ClCG04G002360 Citrullus lanatus HOM05D000070 ORTHO05D002524 3.2e-08 62.8 65 44.6
Os06g0109400 Oryza sativa ssp. japonica HOM05D000070 ORTHO05D002524 3.2e-08 62.8 63 49.2
unitig_749.g14097 Utricularia gibba HOM05D000070 ORTHO05D002524 4.1e-08 62.4 63 49.2
arahy.Tifrunner.gnm1.ann1.RWW1JH Arachis hypogaea HOM05D000070 ORTHO05D002524 5.4e-08 62.0 63 47.6
Zm00001eb379150 Zea mays HOM05D000070 ORTHO05D002524 5.4e-08 62.0 63 44.4
Peaxi162Scf00309g00013 Petunia axillaris HOM05D000070 ORTHO05D002524 7.0e-08 61.6 64 45.3
EL10Ac6g14175 Beta vulgaris HOM05D000070 ORTHO05D002524 9.2e-08 61.2 63 47.6
SHI54235 Sapria himalayana HOM05D000070 ORTHO05D002524 1.2e-07 60.8 49 63.3
RcHm_v2.0_Chr4g0402331 Rosa chinensis HOM05D000070 ORTHO05D002524 2.0e-07 60.1 56 50.0
Migut.J01532 Erythranthe guttata HOM05D000070 ORTHO05D002524 3.5e-07 59.3 64 46.9
Nitab4.5_0006736g0030 Nicotiana tabacum HOM05D000070 ORTHO05D000722 3.5e-07 59.3 54 51.9
DCAR_009373 Daucus carota HOM05D000070 ORTHO05D002524 4.6e-07 58.9 64 43.8
EL10Ac1g00438 Beta vulgaris HOM05D000070 ORTHO05D002524 6.0e-07 58.5 71 39.4
HanXRQChr11g0321411 Helianthus annuus HOM05D000070 ORTHO05D002524 7.8e-07 58.2 63 44.4
SalBow3G2145 Salvia bowleyana HOM05D000070 ORTHO05D002524 7.8e-07 58.2 59 49.2
Zm00001eb000100 Zea mays HOM05D000070 ORTHO05D002524 1.3e-06 57.4 63 46.0
Zm00001eb209180 Zea mays HOM05D000070 ORTHO05D002524 1.3e-06 57.4 63 46.0
Aqoxy1G02217 Aquilegia oxysepala HOM05D000070 ORTHO05D002524 1.7e-06 57.0 66 45.5
Thhalv10010134m.g Eutrema salsugineum HOM05D000070 ORTHO05D002524 1.7e-06 57.0 64 43.8
Medtr2g007010 Medicago truncatula HOM05D000070 ORTHO05D002524 1.7e-06 57.0 60 43.3
Oeu012081.1 Olea europaea HOM05D000070 ORTHO05D002524 1.7e-06 57.0 81 39.5
PSO081G0161 Papaver somniferum HOM05D000070 ORTHO05D002524 1.7e-06 57.0 81 39.5
SHI35512 Sapria himalayana HOM05D000070 ORTHO05D000722 1.7e-06 57.0 42 61.9
VMungo0540G0310 Vigna mungo HOM05D000070 ORTHO05D002524 1.7e-06 57.0 63 46.0
CAN.G1209.10 Capsicum annuum HOM05D000070 ORTHO05D002524 2.3e-06 56.6 64 45.3
CAN.G1646.1 Capsicum annuum HOM05D000070 ORTHO05D002524 2.3e-06 56.6 64 45.3
PSO566G0154 Papaver somniferum HOM05D000070 ORTHO05D002524 2.3e-06 56.6 55 52.7
SHI02676 Sapria himalayana HOM05D000070 ORTHO05D000722 2.3e-06 56.6 42 61.9
HanXRQChr11g0321541 Helianthus annuus HOM05D000070 ORTHO05D002524 3.0e-06 56.2 76 40.8
Aa31LG5G10760 Aethionema arabicum HOM05D000070 ORTHO05D002524 3.9e-06 55.8 48 56.2
Oeu048423.1 Olea europaea HOM05D000070 ORTHO05D002524 3.9e-06 55.8 62 41.9
EL10Ac4g09855 Beta vulgaris HOM05D000070 ORTHO05D002524 5.0e-06 55.5 68 39.7
Medtr3g023900 Medicago truncatula HOM05D000070 ORTHO05D002524 5.0e-06 55.5 60 45.0
Psat1g220280 Pisum sativum HOM05D000070 ORTHO05D002524 5.0e-06 55.5 48 50.0
SalBow3G0416 Salvia bowleyana HOM05D000070 ORTHO05D002524 6.6e-06 55.1 64 45.3
TPR.G12135 Trifolium pratense HOM05D000070 ORTHO05D002524 6.6e-06 55.1 60 45.0
CSS0008673 Camellia sinensis var. sinensis HOM05D000070 ORTHO05D002524 8.6e-06 54.7 48 56.2
Ca_00073_v3 Cicer arietinum L. HOM05D000145 ORTHO05D002524 8.6e-06 54.7 48 50.0
HanXRQChr11g0321401 Helianthus annuus HOM05D000070 ORTHO05D002524 8.6e-06 54.7 64 42.2
HanXRQChr11g0321491 Helianthus annuus HOM05D000070 ORTHO05D002524 8.6e-06 54.7 64 40.6
HanXRQChr11g0321511 Helianthus annuus HOM05D000070 ORTHO05D002524 8.6e-06 54.7 64 42.2


User provided reference genes

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