Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI04405 Sapria himalayana HOM05D003986 ORTHO05D004916 1.6e-55 219.2 111 100.0
Atru.chr11.800 Acer truncatum HOM05D003986 ORTHO05D004916 1.6e-42 176.0 106 77.4
Sabra13G0078400 Salix brachista HOM05D003986 ORTHO05D004916 2.7e-42 175.3 106 77.4
Potri.013G085000 Populus trichocarpa HOM05D003986 ORTHO05D004916 1.3e-41 172.9 106 76.4
Dinv11756 Davidia involucrata HOM05D003986 ORTHO05D004916 1.7e-41 172.6 106 78.3
Manes.17G086100 Manihot esculenta HOM05D003986 ORTHO05D004916 2.3e-41 172.2 106 77.4
Glyma.08G048400 Glycine max HOM05D003986 ORTHO05D004916 8.7e-41 170.2 106 75.5
MD09G1258800 Malus domestica HOM05D003986 ORTHO05D004916 8.7e-41 170.2 106 78.3
Glyma.05G241400 Glycine max HOM05D003986 ORTHO05D004916 1.9e-40 169.1 106 75.5
arahy.Tifrunner.gnm1.ann1.R76IPR Arachis hypogaea HOM05D003986 ORTHO05D004916 3.3e-40 168.3 106 74.5
Dinv14386 Davidia involucrata HOM05D003986 ORTHO05D004916 3.3e-40 168.3 106 77.4
Lsat_1_v5_gn_3_102381 Lactuca sativa HOM05D003986 ORTHO05D004916 4.3e-40 167.9 106 76.4
arahy.Tifrunner.gnm1.ann1.374THF Arachis hypogaea HOM05D003986 ORTHO05D004916 7.3e-40 167.2 106 73.6
Lj4g0022556 Lotus japonicus HOM05D003986 ORTHO05D004916 7.3e-40 167.2 106 75.5
QL03p038358 Quercus lobata HOM05D003986 ORTHO05D004916 7.3e-40 167.2 105 73.3
CsaV3_5G027880 Cucumis sativus L. HOM05D003986 ORTHO05D004916 9.6e-40 166.8 106 75.5
Prupe.3G150800 Prunus persica HOM05D003986 ORTHO05D004916 9.6e-40 166.8 106 78.3
Sed0014719 Sechium edule HOM05D003986 ORTHO05D004916 9.6e-40 166.8 106 75.5
MELO3C005265.2 Cucumis melo HOM05D003986 ORTHO05D004916 1.3e-39 166.4 106 74.5
Medtr7g117220 Medicago truncatula HOM05D003986 ORTHO05D004916 1.3e-39 166.4 106 74.5
PGR142G4089 Punica granatum HOM05D003986 ORTHO05D004916 1.3e-39 166.4 106 74.5
TPR.G12867 Trifolium pratense HOM05D003986 ORTHO05D004916 1.6e-39 166.0 106 73.6
VMungo0251G0132 Vigna mungo HOM05D003986 ORTHO05D004916 1.6e-39 166.0 106 74.5
CiPaw.06G055800 Carya illinoinensis HOM05D003986 ORTHO05D004916 2.1e-39 165.6 106 72.6
Lalb_Chr16g0387401 Lupinus albus HOM05D003986 ORTHO05D004916 2.1e-39 165.6 106 74.5
Potri.019G054600 Populus trichocarpa HOM05D003986 ORTHO05D004916 2.8e-39 165.2 106 76.4
Ca_17244_v3 Cicer arietinum L. HOM05D003986 ORTHO05D004916 3.6e-39 164.9 106 72.6
ECA246G1343 Erigeron canadensis HOM05D003986 ORTHO05D004916 4.8e-39 164.5 106 75.5
Gohir.D02G136832 Gossypium hirsutum HOM05D003986 ORTHO05D004916 4.8e-39 164.5 106 72.6
Gorai.005G152800 Gossypium raimondii HOM05D003986 ORTHO05D004916 4.8e-39 164.5 106 72.6
Psat7g004480 Pisum sativum HOM05D003986 ORTHO05D004916 4.8e-39 164.5 106 72.6
Actinidia12415 Actinidia chinensis HOM05D003986 ORTHO05D004916 6.2e-39 164.1 106 76.4
ClCG01G006690 Citrullus lanatus HOM05D003986 ORTHO05D004916 6.2e-39 164.1 105 74.3
Medtr8g106090 Medicago truncatula HOM05D003986 ORTHO05D004916 6.2e-39 164.1 106 72.6
Sabra19G0063600 Salix brachista HOM05D003986 ORTHO05D004916 6.2e-39 164.1 105 75.2
Ca_29522_v3 Cicer arietinum L. HOM05D003986 ORTHO05D004916 8.1e-39 163.7 105 72.4
Lj3P862T26 Lonicera japonica HOM05D003986 ORTHO05D004916 8.1e-39 163.7 106 73.6
Solyc05g017890.4 Solanum lycopersicum HOM05D003986 ORTHO05D004916 8.1e-39 163.7 106 76.4
Phvul.002G324500 Phaseolus vulgaris HOM05D003986 ORTHO05D004916 1.1e-38 163.3 106 72.6
Rhsim09G0087200 Rhododendron simsii HOM05D003986 ORTHO05D004916 1.1e-38 163.3 107 75.7
Gohir.A03G112200 Gossypium hirsutum HOM05D003986 ORTHO05D004916 1.4e-38 162.9 106 71.7
Lalb_Chr05g0222051 Lupinus albus HOM05D003986 ORTHO05D004916 1.4e-38 162.9 106 74.5
RcHm_v2.0_Chr4g0442311 Rosa chinensis HOM05D003986 ORTHO05D004916 1.4e-38 162.9 106 74.5
Sopen05g014610 Solanum pennellii HOM05D003986 ORTHO05D004916 1.4e-38 162.9 106 76.4
COL.COLO4_06656 Corchorus olitorius HOM05D003986 ORTHO05D004916 2.4e-38 162.2 106 71.7
Eucgr.B02697 Eucalyptus grandis HOM05D003986 ORTHO05D004916 2.4e-38 162.2 106 73.6
MSTRG.2114 Avicennia marina HOM05D003986 ORTHO05D004916 3.1e-38 161.8 106 74.5
CANSAT78G0669 Cannabis sativa HOM05D003986 ORTHO05D004916 3.1e-38 161.8 106 73.6
FvH4_4g33200 Fragaria vesca HOM05D003986 ORTHO05D004916 4.0e-38 161.4 106 73.6
FAN07G2168 Fragaria x ananassa HOM05D003986 ORTHO05D004916 4.0e-38 161.4 106 73.6
FAN12G0920 Fragaria x ananassa HOM05D003986 ORTHO05D004916 4.0e-38 161.4 106 73.6
FAN17G2354 Fragaria x ananassa HOM05D003986 ORTHO05D004916 4.0e-38 161.4 106 73.6
FAN22G0296 Fragaria x ananassa HOM05D003986 ORTHO05D004916 4.0e-38 161.4 106 73.6
THA.LOC104807876 Tarenaya hassleriana HOM05D003986 ORTHO05D004916 4.0e-38 161.4 106 73.6
GSVIVG01011619001 Vitis vinifera HOM05D003986 ORTHO05D004916 5.3e-38 161.0 106 73.6
DCAR_026811 Daucus carota HOM05D003986 ORTHO05D004916 1.2e-37 159.8 106 74.5
Peaxi162Scf00937g00119 Petunia axillaris HOM05D003986 ORTHO05D004916 1.2e-37 159.8 106 74.5
TWI74G0603 Tripterygium wilfordii HOM05D003986 ORTHO05D004916 1.5e-37 159.5 106 72.6
Thecc.02G306600 Theobroma cacao HOM05D003986 ORTHO05D004916 2.0e-37 159.1 106 69.8
CAN.G206.116 Capsicum annuum HOM05D003986 ORTHO05D004916 2.6e-37 158.7 106 74.5
THA.LOC104825570 Tarenaya hassleriana HOM05D003986 ORTHO05D004916 3.4e-37 158.3 106 71.7
Ah.02g127910 Amaranthus hybridus HOM05D003986 ORTHO05D004916 7.6e-37 157.1 105 73.3
AUR62038486 Chenopodium quinoa HOM05D003986 ORTHO05D004916 7.6e-37 157.1 106 72.6
HanXRQChr12g0381871 Helianthus annuus HOM05D003986 ORTHO05D004916 7.6e-37 157.1 106 74.5
Carub.0001s2544 Capsella rubella HOM05D003986 ORTHO05D004916 9.9e-37 156.8 106 71.7
AUR62014146 Chenopodium quinoa HOM05D003986 ORTHO05D004916 1.3e-36 156.4 106 71.7
Migut.E00504 Erythranthe guttata HOM05D003986 ORTHO05D004916 1.7e-36 156.0 104 74.0
SGA_v2.0_scaffold3G01767 Striga asiatica HOM05D003986 ORTHO05D004916 1.7e-36 156.0 106 72.6
Aqoxy3G04028 Aquilegia oxysepala HOM05D003986 ORTHO05D004916 2.2e-36 155.6 107 72.0
CARHR026420 Cardamine hirsuta HOM05D003986 ORTHO05D004916 2.2e-36 155.6 106 70.8
Nitab4.5_0000011g0130 Nicotiana tabacum HOM05D003986 ORTHO05D004916 2.2e-36 155.6 106 73.6
TAR629G0821 Trochodendron aralioides HOM05D003986 ORTHO05D004916 2.2e-36 155.6 106 70.8
Nn4g24477 Nelumbo nucifera HOM05D003986 ORTHO05D004916 3.8e-36 154.8 107 71.0
AL1G40240 Arabidopsis lyrata HOM05D003986 ORTHO05D004916 4.9e-36 154.5 106 70.8
Thhalv10006540m.g Eutrema salsugineum HOM05D003986 ORTHO05D004916 4.9e-36 154.5 106 70.8
Sp1g23110 Schrenkiella parvula HOM05D003986 ORTHO05D004916 4.9e-36 154.5 106 70.8
AT1G24706 Arabidopsis thaliana HOM05D003986 ORTHO05D004916 1.4e-35 152.9 106 69.8
Sc14g0006590 Simmondsia chinensis HOM05D003986 ORTHO05D004916 1.4e-35 152.9 106 69.8
Aa31LG7G9380 Aethionema arabicum HOM05D003986 ORTHO05D004916 1.9e-35 152.5 106 69.8
EL10Ac6g14201 Beta vulgaris HOM05D003986 ORTHO05D004916 2.4e-35 152.1 106 69.8
unitig_8.g4016 Utricularia gibba HOM05D003986 ORTHO05D004916 2.4e-35 152.1 106 67.9
A08p26750 Brassica napus HOM05D003986 ORTHO05D004916 3.2e-35 151.8 106 69.8
C03p73260 Brassica napus HOM05D003986 ORTHO05D004916 3.2e-35 151.8 106 69.8
BolC3t19622H Brassica oleracea HOM05D003986 ORTHO05D004916 3.2e-35 151.8 106 69.8
BraA08t34620Z Brassica rapa HOM05D003986 ORTHO05D004916 3.2e-35 151.8 106 69.8
PSO063G2585 Papaver somniferum HOM05D003986 ORTHO05D004916 1.2e-34 149.8 107 70.1
PSO782G5475 Papaver somniferum HOM05D003986 ORTHO05D004916 1.2e-34 149.8 107 70.1
CDE05G1569 Ceratophyllum demersum HOM05D003986 ORTHO05D004916 1.6e-34 149.4 107 69.2
ATR0021G052 Amborella trichopoda HOM05D003986 ORTHO05D004916 3.5e-34 148.3 107 69.2
CDE05G3646 Ceratophyllum demersum HOM05D003986 ORTHO05D004916 6.0e-34 147.5 107 68.2
Haze_08333 Corylus avellana HOM05D003986 ORTHO05D004916 8.7e-33 143.7 100 71.0
HPP92_004743 Vanilla planifolia HOM05D003986 ORTHO05D004916 8.7e-33 143.7 107 67.3
Zm00001eb156750 Zea mays HOM05D003986 ORTHO05D004916 1.5e-32 142.9 107 66.4
BcaB03g12046 Brassica carinata HOM05D003986 ORTHO05D004916 1.9e-32 142.5 99 70.7
Mapoly0001s0369 Marchantia polymorpha HOM05D003986 ORTHO05D004916 7.4e-32 140.6 107 64.5
Hund24924 Selenicereus undatus HOM05D008000 ORTHO05D010275 1.3e-31 139.8 148 54.1
AagrBONN_evm.TU.Sc2ySwM_117.1912 Anthoceros agrestis HOM05D003986 ORTHO05D004916 1.7e-28 129.4 107 63.6
CSS0009129 Camellia sinensis var. sinensis HOM05D003986 ORTHO05D004916 1.7e-28 129.4 84 72.6
Pp3c11_17570 Physcomitrium patens HOM05D003986 ORTHO05D004916 4.6e-26 121.3 107 56.1
SMO145G0041 Selaginella moellendorffii HOM05D003986 ORTHO05D004916 1.3e-25 119.8 106 57.5
Nitab4.5_0004735g0040 Nicotiana tabacum HOM05D003986 ORTHO05D004916 9.6e-24 113.6 106 59.4
Ciclev10017843m.g Citrus clementina HOM05D003986 ORTHO05D004916 1.4e-22 109.8 66 75.8
C05p25490 Brassica napus HOM05D003986 ORTHO05D004916 6.5e-20 100.9 110 49.1
BolC5t31277H Brassica oleracea HOM05D003986 ORTHO05D004916 1.1e-19 100.1 108 49.1
Os01g0916800 Oryza sativa ssp. japonica HOM05D003986 ORTHO05D004916 9.3e-19 97.1 107 51.4
MCO13G375 Micromonas commoda HOM05D003986 ORTHO05D004916 2.1e-10 69.3 80 40.0
Rhsim04G0143900 Rhododendron simsii HOM05D003986 ORTHO05D004916 3.6e-10 68.6 48 70.8
Rhsim04G0143600 Rhododendron simsii HOM05D003986 ORTHO05D004916 3.0e-09 65.5 51 64.7
Rhsim04G0125900 Rhododendron simsii HOM05D003986 ORTHO05D004916 1.1e-06 57.0 41 65.9


User provided reference genes

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