Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI04354 Sapria himalayana HOM05D003836 ORTHO05D004556 8.1e-54 213.4 101 100.0
Lalb_Chr23g0273371 Lupinus albus HOM05D003836 ORTHO05D004556 8.8e-16 87.0 64 68.8
Lj1g0024673 Lotus japonicus HOM05D003836 ORTHO05D004556 1.1e-15 86.7 69 66.7
COL.COLO4_27608 Corchorus olitorius HOM05D003836 ORTHO05D004556 3.3e-15 85.1 79 57.0
Gohir.D12G157600 Gossypium hirsutum HOM05D003836 ORTHO05D004556 3.3e-15 85.1 79 57.0
Gohir.A12G154400 Gossypium hirsutum HOM05D003836 ORTHO05D004556 4.4e-15 84.7 61 65.6
Manes.15G136900 Manihot esculenta HOM05D003836 ORTHO05D004556 4.4e-15 84.7 74 62.2
Prupe.1G335900 Prunus persica HOM05D003836 ORTHO05D004556 4.4e-15 84.7 79 60.8
Cfa015051 Carpinus fangiana HOM05D003836 ORTHO05D004556 5.7e-15 84.3 74 60.8
Haze_10840 Corylus avellana HOM05D003836 ORTHO05D004556 5.7e-15 84.3 74 60.8
Glyma.04G189300 Glycine max HOM05D003836 ORTHO05D004556 7.4e-15 84.0 61 67.2
Gorai.008G170400 Gossypium raimondii HOM05D003836 ORTHO05D004556 7.4e-15 84.0 61 65.6
MD13G1017500 Malus domestica HOM05D003836 ORTHO05D004556 7.4e-15 84.0 79 59.5
Manes.17G086000 Manihot esculenta HOM05D003836 ORTHO05D004556 7.4e-15 84.0 66 63.6
FAN07G2679 Fragaria x ananassa HOM05D003836 ORTHO05D004556 1.3e-14 83.2 61 68.9
FAN22G0514 Fragaria x ananassa HOM05D003836 ORTHO05D004556 1.3e-14 83.2 61 68.9
Lalb_Chr11g0070001 Lupinus albus HOM05D003836 ORTHO05D004556 1.3e-14 83.2 64 64.1
arahy.Tifrunner.gnm1.ann1.HCE13Z Arachis hypogaea HOM05D003836 ORTHO05D004556 1.7e-14 82.8 52 71.2
arahy.Tifrunner.gnm1.ann1.THT645 Arachis hypogaea HOM05D003836 ORTHO05D004556 1.7e-14 82.8 52 71.2
Dinv02294 Davidia involucrata HOM05D003836 ORTHO05D004556 1.7e-14 82.8 60 68.3
Glyma.06G176300 Glycine max HOM05D003836 ORTHO05D004556 1.7e-14 82.8 61 65.6
Potri.010G103400 Populus trichocarpa HOM05D003836 ORTHO05D004556 1.7e-14 82.8 74 60.8
CiPaw.05G187900 Carya illinoinensis HOM05D003836 ORTHO05D004556 2.2e-14 82.4 78 59.0
RcHm_v2.0_Chr4g0442391 Rosa chinensis HOM05D003836 ORTHO05D004556 2.2e-14 82.4 56 69.6
arahy.Tifrunner.gnm1.ann1.36Q8NS Arachis hypogaea HOM05D003836 ORTHO05D004556 2.8e-14 82.0 52 71.2
arahy.Tifrunner.gnm1.ann1.FHB42U Arachis hypogaea HOM05D003836 ORTHO05D004556 2.8e-14 82.0 52 71.2
Duzib251G0897 Durio zibethinus HOM05D003836 ORTHO05D004556 2.8e-14 82.0 69 60.9
FvH4_4g33240 Fragaria vesca HOM05D003836 ORTHO05D004556 2.8e-14 82.0 56 69.6
FAN12G1258 Fragaria x ananassa HOM05D003836 ORTHO05D004556 2.8e-14 82.0 56 69.6
FAN17G2261 Fragaria x ananassa HOM05D003836 ORTHO05D004556 2.8e-14 82.0 56 69.6
VMungo1309G0617 Vigna mungo HOM05D003836 ORTHO05D004556 4.8e-14 81.3 61 65.6
Dinv32673 Davidia involucrata HOM05D003836 ORTHO05D004556 6.3e-14 80.9 74 58.1
Phvul.009G172600 Phaseolus vulgaris HOM05D003836 ORTHO05D004556 1.1e-13 80.1 61 65.6
Cpa.g.sc2.157 Carica papaya HOM05D003836 ORTHO05D004556 1.4e-13 79.7 79 59.5
Hma1.2p1_1450F.1_g284160 Hydrangea macrophylla HOM05D003836 ORTHO05D004556 1.4e-13 79.7 51 70.6
Hma1.2p1_2859F.1_g329510 Hydrangea macrophylla HOM05D003836 ORTHO05D004556 1.4e-13 79.7 51 70.6
QL03p038287 Quercus lobata HOM05D003836 ORTHO05D004556 1.4e-13 79.7 64 62.5
Sabra10G0076000 Salix brachista HOM05D003836 ORTHO05D004556 1.4e-13 79.7 52 73.1
CANSAT78G2203 Cannabis sativa HOM05D003836 ORTHO05D004556 1.8e-13 79.3 79 57.0
DCAR_030293 Daucus carota HOM05D003836 ORTHO05D004556 1.8e-13 79.3 51 68.6
Lj6A734G74 Lonicera japonica HOM05D003836 ORTHO05D004556 1.8e-13 79.3 60 66.7
Migut.E00502 Erythranthe guttata HOM05D003836 ORTHO05D004556 2.4e-13 79.0 56 69.6
Gohir.A13G027900 Gossypium hirsutum HOM05D003836 ORTHO05D004556 2.4e-13 79.0 61 63.9
Gohir.D13G026700 Gossypium hirsutum HOM05D003836 ORTHO05D004556 2.4e-13 79.0 61 63.9
Gorai.013G030000 Gossypium raimondii HOM05D003836 ORTHO05D004556 2.4e-13 79.0 61 63.9
GSVIVG01011621001 Vitis vinifera HOM05D003836 ORTHO05D004556 2.4e-13 79.0 54 68.5
MD16G1015700 Malus domestica HOM05D003836 ORTHO05D004556 3.1e-13 78.6 79 57.0
TAR374G0617 Trochodendron aralioides HOM05D003836 ORTHO05D004556 3.1e-13 78.6 52 71.2
Atru.chr7.2694 Acer truncatum HOM05D003836 ORTHO05D004556 4.1e-13 78.2 79 55.7
Psat5g116920 Pisum sativum HOM05D003836 ORTHO05D004556 4.1e-13 78.2 61 62.3
PGR142G3191 Punica granatum HOM05D003836 ORTHO05D004556 4.1e-13 78.2 52 69.2
TPR.G35600 Trifolium pratense HOM05D003836 ORTHO05D004556 4.1e-13 78.2 61 62.3
Medtr3g076570 Medicago truncatula HOM05D003836 ORTHO05D004556 5.3e-13 77.8 61 62.3
Nn3g18432 Nelumbo nucifera HOM05D003836 ORTHO05D004556 5.3e-13 77.8 64 60.9
Oeu036124.4 Olea europaea HOM05D003836 ORTHO05D004556 5.3e-13 77.8 55 65.5
arahy.Tifrunner.gnm1.ann1.0AB4R7 Arachis hypogaea HOM05D003836 ORTHO05D004556 7.0e-13 77.4 57 61.4
EL10Ac8g19453 Beta vulgaris HOM05D003836 ORTHO05D004556 7.0e-13 77.4 53 66.0
Duzib268G0198 Durio zibethinus HOM05D003836 ORTHO05D004556 7.0e-13 77.4 61 62.3
Ca_16122_v3 Cicer arietinum L. HOM05D003836 ORTHO05D004556 9.1e-13 77.0 61 62.3
Ciclev10014689m.g Citrus clementina HOM05D003836 ORTHO05D004556 9.1e-13 77.0 79 54.4
SGA_v2.0_scaffold23G10153 Striga asiatica HOM05D003836 ORTHO05D004556 9.1e-13 77.0 56 67.9
HanXRQChr15g0473551 Helianthus annuus HOM05D003836 ORTHO05D004556 1.2e-12 76.6 50 68.0
unitig_8.g4015 Utricularia gibba HOM05D003836 ORTHO05D004556 1.2e-12 76.6 46 73.9
AUR62033051 Chenopodium quinoa HOM05D003836 ORTHO05D004556 1.6e-12 76.3 49 67.3
SalBow2G2298 Salvia bowleyana HOM05D003836 ORTHO05D004556 1.6e-12 76.3 56 66.1
TWI74G0623 Tripterygium wilfordii HOM05D003836 ORTHO05D004556 1.6e-12 76.3 74 55.4
DCAR_023556 Daucus carota HOM05D003836 ORTHO05D004556 2.0e-12 75.9 69 56.5
Hund15725 Selenicereus undatus HOM05D003836 ORTHO05D004556 2.0e-12 75.9 50 70.0
Sopen06g017410 Solanum pennellii HOM05D003836 ORTHO05D004556 2.0e-12 75.9 55 65.5
Aqoxy6G01037 Aquilegia oxysepala HOM05D003836 ORTHO05D004556 2.6e-12 75.5 59 59.3
Aa31sc536G20 Aethionema arabicum HOM05D003836 ORTHO05D004556 3.5e-12 75.1 71 49.3
MELO3C013236.2 Cucumis melo HOM05D003836 ORTHO05D004556 3.5e-12 75.1 74 55.4
Hma1.2p1_0658F.1_g197210 Hydrangea macrophylla HOM05D003836 ORTHO05D004556 3.5e-12 75.1 55 65.5
Nitab4.5_0001516g0010 Nicotiana tabacum HOM05D003836 ORTHO05D004556 3.5e-12 75.1 69 56.5
Cc11_g06410 Coffea canephora HOM05D003836 ORTHO05D004556 4.5e-12 74.7 56 64.3
Sed0017171 Sechium edule HOM05D003836 ORTHO05D004556 4.5e-12 74.7 63 58.7
ECA246G1487 Erigeron canadensis HOM05D003836 ORTHO05D004556 5.9e-12 74.3 55 61.8
Eucgr.G02079 Eucalyptus grandis HOM05D003836 ORTHO05D004556 5.9e-12 74.3 47 66.0
PSO063G7099 Papaver somniferum HOM05D003836 ORTHO05D004556 5.9e-12 74.3 61 60.7
PSO782G5172 Papaver somniferum HOM05D003836 ORTHO05D004556 5.9e-12 74.3 61 60.7
Peaxi162Scf00825g00424 Petunia axillaris HOM05D003836 ORTHO05D004556 7.7e-12 73.9 89 48.3
Nn4g24475 Nelumbo nucifera HOM05D003836 ORTHO05D004556 1.0e-11 73.6 56 60.7
MBI11_g36366_MAGBIO Magnolia biondii HOM05D003836 ORTHO05D004556 1.3e-11 73.2 89 41.6
Sc10g0004870 Simmondsia chinensis HOM05D003836 ORTHO05D004556 1.3e-11 73.2 51 62.7
TAR622G1236 Trochodendron aralioides HOM05D003836 ORTHO05D004556 1.7e-11 72.8 51 64.7
arahy.Tifrunner.gnm1.ann1.6NWB5V Arachis hypogaea HOM05D003836 ORTHO05D004556 2.2e-11 72.4 56 62.5
VMungo0251G2034 Vigna mungo HOM05D003836 ORTHO05D004556 6.5e-11 70.9 77 49.4
ATR0021G013 Amborella trichopoda HOM05D003836 ORTHO05D004556 1.1e-10 70.1 49 61.2
ClCG11G007570 Citrullus lanatus HOM05D003836 ORTHO05D004556 1.1e-10 70.1 51 64.7
Lsat_1_v5_gn_3_104360 Lactuca sativa HOM05D003836 ORTHO05D004556 1.1e-10 70.1 55 56.4
TPR.G32436 Trifolium pratense HOM05D003836 ORTHO05D004556 1.1e-10 70.1 67 50.7
Ah.02g131240 Amaranthus hybridus HOM05D003836 ORTHO05D004556 1.5e-10 69.7 55 58.2
CsaV3_7G022080 Cucumis sativus L. HOM05D003836 ORTHO05D004556 1.5e-10 69.7 51 64.7
AL2G26960 Arabidopsis lyrata HOM05D003836 ORTHO05D004556 2.5e-10 68.9 47 61.7
AT1G67960 Arabidopsis thaliana HOM05D003836 ORTHO05D004556 2.5e-10 68.9 47 61.7
CARHR060610 Cardamine hirsuta HOM05D003836 ORTHO05D004556 2.5e-10 68.9 47 61.7
Thhalv10018303m.g Eutrema salsugineum HOM05D003836 ORTHO05D004556 2.5e-10 68.9 47 61.7
SEGI_35804 Sequoiadendron giganteum HOM05D003836 ORTHO05D004556 2.5e-10 68.9 44 63.6
BcaB03g15147 Brassica carinata HOM05D003836 ORTHO05D004556 3.2e-10 68.6 47 61.7
Carub.0002s1445 Capsella rubella HOM05D003836 ORTHO05D004556 3.2e-10 68.6 47 61.7
CAN.G2032.2 Capsicum annuum HOM05D003836 ORTHO05D004556 3.2e-10 68.6 50 64.0
Sp5g22940 Schrenkiella parvula HOM05D003836 ORTHO05D004556 4.2e-10 68.2 47 61.7
Phvul.002G223900 Phaseolus vulgaris HOM05D003836 ORTHO05D004556 7.2e-10 67.4 77 51.9
Zm00001eb216180 Zea mays HOM05D003836 ORTHO05D004556 7.2e-10 67.4 51 56.9
Ca_18505_v3 Cicer arietinum L. HOM05D003836 ORTHO05D004556 1.2e-09 66.6 48 60.4
Medtr4g090465 Medicago truncatula HOM05D003836 ORTHO05D004556 1.2e-09 66.6 47 61.7
A07p34480 Brassica napus HOM05D003836 ORTHO05D004556 2.7e-09 65.5 47 57.4
Glyma.07G191900 Glycine max HOM05D003836 ORTHO05D004556 4.7e-09 64.7 56 55.4
Zm00001eb237940 Zea mays HOM05D003836 ORTHO05D004556 8.0e-09 63.9 44 59.1
Zm00001eb410650 Zea mays HOM05D003836 ORTHO05D004556 8.0e-09 63.9 44 59.1
HPP92_020596 Vanilla planifolia HOM05D003836 ORTHO05D004556 1.0e-08 63.5 55 50.9
BcaC08g46221 Brassica carinata HOM05D003836 ORTHO05D004556 1.8e-08 62.8 47 55.3
C01p04020 Brassica napus HOM05D003836 ORTHO05D004556 1.8e-08 62.8 47 55.3
C06p42030 Brassica napus HOM05D003836 ORTHO05D004556 1.8e-08 62.8 47 55.3
BolC6t39223H Brassica oleracea HOM05D003836 ORTHO05D004556 1.8e-08 62.8 47 55.3
Zm00001eb175210 Zea mays HOM05D003836 ORTHO05D004556 2.3e-08 62.4 44 56.8
BcaB03g15387 Brassica carinata HOM05D003836 ORTHO05D004556 3.0e-08 62.0 50 60.0
Gohir.D13G133800 Gossypium hirsutum HOM05D003836 ORTHO05D004556 4.0e-08 61.6 46 67.4
Gorai.013G150200 Gossypium raimondii HOM05D003836 ORTHO05D004556 4.0e-08 61.6 46 67.4
Os03g0715400 Oryza sativa ssp. japonica HOM05D003836 ORTHO05D004556 4.0e-08 61.6 50 50.0
Atru.chr11.806 Acer truncatum HOM05D003836 ORTHO05D004556 5.2e-08 61.2 46 67.4
Glyma.13G184600 Glycine max HOM05D003836 ORTHO05D004556 1.1e-07 60.1 54 55.6
Mapoly0019s0007 Marchantia polymorpha HOM05D003836 ORTHO05D004556 1.1e-07 60.1 50 52.0


User provided reference genes

Program Settings