Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI04101 Sapria himalayana HOM05D005865 ORTHO05D006867 5.6e-101 370.9 187 100.0
Potri.005G247500 Populus trichocarpa HOM05D005865 ORTHO05D006867 2.2e-20 103.2 163 42.3
Manes.18G007801 Manihot esculenta HOM05D005865 ORTHO05D006867 1.4e-19 100.5 145 44.1
Duzib093G0711 Durio zibethinus HOM05D005865 ORTHO05D006867 1.9e-19 100.1 166 42.8
FAN27G0680 Fragaria x ananassa HOM05D005865 ORTHO05D006867 1.9e-19 100.1 156 41.7
Sabra05G0191400 Salix brachista HOM05D005865 ORTHO05D006867 3.2e-19 99.4 160 39.4
Lj5g0011422 Lotus japonicus HOM05D005865 ORTHO05D006867 7.1e-19 98.2 141 44.0
arahy.Tifrunner.gnm1.ann1.88Q24L Arachis hypogaea HOM05D005865 ORTHO05D006867 1.2e-18 97.4 156 41.0
GSVIVG01008710001 Vitis vinifera HOM05D005865 ORTHO05D006867 1.2e-18 97.4 167 42.5
vmacro04388 Vaccinium macrocarpon HOM05D005865 ORTHO05D006867 2.1e-18 96.7 167 40.1
ClCG05G015260 Citrullus lanatus HOM05D005865 ORTHO05D006867 4.6e-18 95.5 141 41.8
Aqoxy6G01868 Aquilegia oxysepala HOM05D005865 ORTHO05D006867 7.8e-18 94.7 156 41.7
Actinidia37960 Actinidia chinensis HOM05D005865 ORTHO05D006867 1.3e-17 94.0 163 39.9
Cc10_g00980 Coffea canephora HOM05D005865 ORTHO05D006867 3.9e-17 92.4 159 40.3
Ciclev10000742m.g Citrus clementina HOM05D005865 ORTHO05D006867 6.6e-17 91.7 146 39.0
DCAR_013898 Daucus carota HOM05D005865 ORTHO05D006867 6.6e-17 91.7 144 41.7
QL02p013522 Quercus lobata HOM05D005865 ORTHO05D006867 6.6e-17 91.7 159 40.3
TAR381G0423 Trochodendron aralioides HOM05D005865 ORTHO05D006867 6.6e-17 91.7 168 39.3
Ah.00g000500 Amaranthus hybridus HOM05D005865 ORTHO05D006867 1.5e-16 90.5 156 38.5
Dinv31911 Davidia involucrata HOM05D005865 ORTHO05D006867 1.5e-16 90.5 162 39.5
Psat0s4771g0080 Pisum sativum HOM05D005865 ORTHO05D006867 1.9e-16 90.1 154 39.6
CSS0021595 Camellia sinensis var. sinensis HOM05D005865 ORTHO05D006867 3.3e-16 89.4 167 39.5
Lsat_1_v5_gn_2_5921 Lactuca sativa HOM05D005865 ORTHO05D006867 3.3e-16 89.4 161 39.8
CiPaw.07G141800 Carya illinoinensis HOM05D005865 ORTHO05D006867 4.3e-16 89.0 143 44.8
CsaV3_4G037060 Cucumis sativus L. HOM05D005865 ORTHO05D006867 4.3e-16 89.0 137 40.1
Hund05136 Selenicereus undatus HOM05D005865 ORTHO05D006867 4.3e-16 89.0 153 41.2
Peaxi162Scf00174g01413 Petunia axillaris HOM05D005865 ORTHO05D006867 9.5e-16 87.8 164 36.0
Atru.chr13.184 Acer truncatum HOM05D005865 ORTHO05D006867 1.2e-15 87.4 135 43.0
Gohir.D05G184600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 1.2e-15 87.4 154 38.3
Cpa.g.sc26.238 Carica papaya HOM05D005865 ORTHO05D006867 1.6e-15 87.0 54 72.2
Gohir.A05G181600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 1.6e-15 87.0 154 38.3
ATR0665G248 Amborella trichopoda HOM05D005865 ORTHO05D006867 2.1e-15 86.7 165 35.8
Glyma.14G222900 Glycine max HOM05D005865 ORTHO05D006867 2.1e-15 86.7 143 39.9
Gorai.009G190100 Gossypium raimondii HOM05D005865 ORTHO05D006867 2.1e-15 86.7 154 38.3
Nn5g30889 Nelumbo nucifera HOM05D005865 ORTHO05D006867 2.1e-15 86.7 161 40.4
Phvul.001G001600 Phaseolus vulgaris HOM05D005865 ORTHO05D006867 2.1e-15 86.7 145 40.7
Lalb_Chr03g0033591 Lupinus albus HOM05D005865 ORTHO05D006867 2.8e-15 86.3 157 37.6
Prupe.1G357400 Prunus persica HOM05D005865 ORTHO05D006867 2.8e-15 86.3 168 36.3
BcaNung03380 Brassica carinata HOM05D005865 ORTHO05D006867 3.6e-15 85.9 155 36.1
C07p23040 Brassica napus HOM05D005865 ORTHO05D006867 3.6e-15 85.9 155 36.1
BolC7t42845H Brassica oleracea HOM05D005865 ORTHO05D006867 3.6e-15 85.9 155 36.1
FvH4_2g37810 Fragaria vesca HOM05D005865 ORTHO05D006867 3.6e-15 85.9 156 37.8
VMungo0647G1107 Vigna mungo HOM05D005865 ORTHO05D006867 3.6e-15 85.9 156 37.8
CARHR020860 Cardamine hirsuta HOM05D005865 ORTHO05D006867 4.7e-15 85.5 153 37.3
ECA238G0937 Erigeron canadensis HOM05D005865 ORTHO05D006867 4.7e-15 85.5 161 39.8
Migut.N03192 Erythranthe guttata HOM05D005865 ORTHO05D006867 4.7e-15 85.5 158 37.3
THA.LOC104813767 Tarenaya hassleriana HOM05D005865 ORTHO05D006867 4.7e-15 85.5 155 36.8
A07p15800 Brassica napus HOM05D005865 ORTHO05D006867 6.2e-15 85.1 156 36.5
Hma1.2p1_1100F.1_g257160 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 6.2e-15 85.1 169 39.1
HPP92_014547 Vanilla planifolia HOM05D005865 ORTHO05D006867 1.1e-14 84.3 165 38.8
BraA06t24751Z Brassica rapa HOM05D005865 ORTHO05D006867 1.4e-14 84.0 155 37.4
PSO541G4963 Papaver somniferum HOM05D005865 ORTHO05D006867 1.4e-14 84.0 167 38.3
PGR031G3425 Punica granatum HOM05D005865 ORTHO05D006867 1.4e-14 84.0 152 39.5
A06p16480 Brassica napus HOM05D005865 ORTHO05D006867 1.8e-14 83.6 155 36.8
TWI36G0296 Tripterygium wilfordii HOM05D005865 ORTHO05D006867 1.8e-14 83.6 96 46.9
BraA07t29307Z Brassica rapa HOM05D005865 ORTHO05D006867 2.3e-14 83.2 155 35.5
Sed0014892 Sechium edule HOM05D005865 ORTHO05D006867 2.3e-14 83.2 137 38.7
Thhalv10007426m.g Eutrema salsugineum HOM05D005865 ORTHO05D006867 3.1e-14 82.8 154 37.7
HanXRQChr14g0428991 Helianthus annuus HOM05D005865 ORTHO05D006867 4.0e-14 82.4 155 38.7
PSO675G0073 Papaver somniferum HOM05D005865 ORTHO05D006867 5.2e-14 82.0 177 35.6
Thecc.08G054600 Theobroma cacao HOM05D005865 ORTHO05D006867 5.2e-14 82.0 146 40.4
AT1G20410 Arabidopsis thaliana HOM05D005865 ORTHO05D006867 6.8e-14 81.6 152 36.8
RcHm_v2.0_Chr6g0303901 Rosa chinensis HOM05D005865 ORTHO05D006867 6.8e-14 81.6 145 37.9
AL1G33260 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 8.9e-14 81.3 134 38.1
Cfa014029 Carpinus fangiana HOM05D005865 ORTHO05D006867 8.9e-14 81.3 143 39.2
Haze_22735 Corylus avellana HOM05D005865 ORTHO05D006867 8.9e-14 81.3 55 63.6
AL1G33330 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 1.2e-13 80.9 131 38.9
CANSAT56G1424 Cannabis sativa HOM05D005865 ORTHO05D006867 1.2e-13 80.9 163 35.0
BcaC05g25951 Brassica carinata HOM05D005865 ORTHO05D006867 1.5e-13 80.5 156 37.2
C05p19010 Brassica napus HOM05D005865 ORTHO05D006867 1.5e-13 80.5 156 37.2
BolC5t30602H Brassica oleracea HOM05D005865 ORTHO05D006867 1.5e-13 80.5 156 37.2
MD08G1005300 Malus domestica HOM05D005865 ORTHO05D006867 1.5e-13 80.5 154 39.0
BcaB07g32044 Brassica carinata HOM05D005865 ORTHO05D006867 2.0e-13 80.1 154 35.7
CAN.G311.92 Capsicum annuum HOM05D005865 ORTHO05D006867 2.6e-13 79.7 159 37.1
Sp1g18130 Schrenkiella parvula HOM05D005865 ORTHO05D006867 2.6e-13 79.7 134 37.3
unitig_747.g21718 Utricularia gibba HOM05D005865 ORTHO05D006867 2.6e-13 79.7 161 36.0
Ca_13490_v3 Cicer arietinum L. HOM05D005865 ORTHO05D006867 4.4e-13 79.0 128 39.8
PGSC0003DMG400009964 Solanum tuberosum HOM05D005865 ORTHO05D006867 7.6e-13 78.2 162 37.0
Carub.0001s1989 Capsella rubella HOM05D005865 ORTHO05D006867 1.3e-12 77.4 152 35.5
Aa31LG7G4730 Aethionema arabicum HOM05D005865 ORTHO05D006867 1.7e-12 77.0 153 34.6
Lj4A15G44 Lonicera japonica HOM05D005865 ORTHO05D006867 1.7e-12 77.0 189 33.3
MSTRG.1133 Avicennia marina HOM05D005865 ORTHO05D006867 2.9e-12 76.3 162 37.0
Eucgr.F03532 Eucalyptus grandis HOM05D005865 ORTHO05D006867 2.9e-12 76.3 146 36.3
Medtr1g026400 Medicago truncatula HOM05D005865 ORTHO05D006867 4.9e-12 75.5 63 55.6
Sc15g0004650 Simmondsia chinensis HOM05D005865 ORTHO05D006867 4.9e-12 75.5 159 37.7
Solyc04g082130.4 Solanum lycopersicum HOM05D005865 ORTHO05D006867 1.9e-11 73.6 162 35.2
SGA_v2.0_scaffold25G11198 Striga asiatica HOM05D005865 ORTHO05D006867 1.9e-11 73.6 147 34.7
arahy.Tifrunner.gnm1.ann1.YCE7MW Arachis hypogaea HOM05D005865 ORTHO05D006867 5.4e-11 72.0 156 34.6
Hma1.2p1_1100F.1_g257170 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 5.4e-11 72.0 52 61.5
SEGI_14934 Sequoiadendron giganteum HOM05D005865 ORTHO05D006867 7.1e-11 71.6 63 50.8
Rhsim07G0252700 Rhododendron simsii HOM05D005865 ORTHO05D006867 1.6e-10 70.5 212 30.7
Sopen04g035760 Solanum pennellii HOM05D005865 ORTHO05D006867 2.1e-10 70.1 169 31.4
BcaB03g14323 Brassica carinata HOM05D005865 ORTHO05D006867 3.5e-10 69.3 54 57.4
Os04g0561700 Oryza sativa ssp. japonica HOM05D005865 ORTHO05D006867 3.5e-10 69.3 146 37.0
EL10Ac1g02030 Beta vulgaris HOM05D005865 ORTHO05D006867 4.6e-10 68.9 159 35.8
Zm00001eb074060 Zea mays HOM05D005865 ORTHO05D006867 4.6e-10 68.9 154 37.0
Pp3c20_10980 Physcomitrium patens HOM05D005865 ORTHO05D006867 7.8e-10 68.2 51 51.0
SalBow6G0433 Salvia bowleyana HOM05D005865 ORTHO05D006867 1.3e-09 67.4 55 52.7
AUR62036767 Chenopodium quinoa HOM05D005865 ORTHO05D006867 4.7e-07 58.9 156 34.6
Mapoly0006s0010 Marchantia polymorpha HOM05D005865 ORTHO05D006867 4.7e-07 58.9 57 45.6
COL.COLO4_26054 Corchorus olitorius HOM05D005865 ORTHO05D006867 6.2e-07 58.5 156 33.3
AagrBONN_evm.TU.Sc2ySwM_344.4811 Anthoceros agrestis HOM05D005865 ORTHO05D006867 8.1e-07 58.2 57 43.9
MELO3C017004.2 Cucumis melo HOM05D005865 ORTHO05D006867 1.4e-06 57.4 135 33.3


User provided reference genes

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