Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI03977 Sapria himalayana HOM05D004944 ORTHO05D005989 4.3e-76 288.1 168 100.0
SalBow2G1212 Salvia bowleyana HOM05D004944 ORTHO05D005989 8.3e-11 71.2 122 41.8
GSVIVG01000850001 Vitis vinifera HOM05D004944 ORTHO05D005989 5.0e-08 62.0 116 37.9
Duzib128G1953 Durio zibethinus HOM05D004944 ORTHO05D005989 6.6e-08 61.6 116 36.2
PGR031G0610 Punica granatum HOM05D004944 ORTHO05D005989 8.6e-08 61.2 116 35.3
THA.LOC104819120 Tarenaya hassleriana HOM05D004944 ORTHO05D005989 1.5e-07 60.5 118 35.6
TWI15G1108 Tripterygium wilfordii HOM05D004944 ORTHO05D005989 1.5e-07 60.5 118 36.4
CSS0047173 Camellia sinensis var. sinensis HOM05D004944 ORTHO05D005989 1.9e-07 60.1 116 35.3
Hund15708 Selenicereus undatus HOM05D004944 ORTHO05D005989 3.3e-07 59.3 118 33.9
Atru.chr11.2502 Acer truncatum HOM05D004944 ORTHO05D005989 4.3e-07 58.9 118 37.3
Thecc.10G005400 Theobroma cacao HOM05D004944 ORTHO05D005989 4.3e-07 58.9 116 37.1
Hma1.2p1_0184F.1_g081120 Hydrangea macrophylla HOM05D004944 ORTHO05D005989 5.6e-07 58.5 116 36.2
Lj9C645T11 Lonicera japonica HOM05D004944 ORTHO05D005989 5.6e-07 58.5 116 35.3
QL04p013327 Quercus lobata HOM05D004944 ORTHO05D005989 5.6e-07 58.5 118 36.4
Gohir.D13G014300 Gossypium hirsutum HOM05D004944 ORTHO05D005989 9.5e-07 57.8 116 37.1
Gorai.013G015500 Gossypium raimondii HOM05D004944 ORTHO05D005989 9.5e-07 57.8 116 37.1
Actinidia06272 Actinidia chinensis HOM05D004944 ORTHO05D005989 1.2e-06 57.4 116 35.3
Lalb_Chr04g0263921 Lupinus albus HOM05D004944 ORTHO05D005989 1.2e-06 57.4 118 35.6
Potri.003G202300 Populus trichocarpa HOM05D004944 ORTHO05D005989 1.2e-06 57.4 116 36.2
Prupe.2G028500 Prunus persica HOM05D004944 ORTHO05D005989 1.2e-06 57.4 118 35.6
Nn7g36468 Nelumbo nucifera HOM05D004944 ORTHO05D005989 1.6e-06 57.0 116 35.3
Nitab4.5_0000316g0180 Nicotiana tabacum HOM05D004944 ORTHO05D005989 1.6e-06 57.0 118 33.9
Solyc01g068350.3 Solanum lycopersicum HOM05D004944 ORTHO05D005989 1.6e-06 57.0 118 33.9
Sopen01g030310 Solanum pennellii HOM05D004944 ORTHO05D005989 1.6e-06 57.0 118 33.9
Ciclev10030882m.g Citrus clementina HOM05D004944 ORTHO05D005989 2.1e-06 56.6 116 37.1
CAN.G410.46 Capsicum annuum HOM05D004944 ORTHO05D005989 2.8e-06 56.2 118 33.9
Dinv32057 Davidia involucrata HOM05D004944 ORTHO05D005989 2.8e-06 56.2 116 35.3
Sabra03G0149500 Salix brachista HOM05D004944 ORTHO05D005989 2.8e-06 56.2 118 34.7
Prupe.7G020900 Prunus persica HOM05D004944 ORTHO05D005989 4.7e-06 55.5 118 36.4
Cc02_g29470 Coffea canephora HOM05D004944 ORTHO05D005989 6.2e-06 55.1 116 31.0
Nitab4.5_0006307g0060 Nicotiana tabacum HOM05D004944 ORTHO05D005989 6.2e-06 55.1 118 33.1
PSO135G0630 Papaver somniferum HOM05D004944 ORTHO05D005989 6.2e-06 55.1 116 35.3
RcHm_v2.0_Chr3g0488831 Rosa chinensis HOM05D004944 ORTHO05D005989 6.2e-06 55.1 118 35.6
MD02G1296200 Malus domestica HOM05D004944 ORTHO05D005989 8.0e-06 54.7 116 34.5
Peaxi162Scf00309g00016 Petunia axillaris HOM05D004944 ORTHO05D005989 8.0e-06 54.7 118 33.1
Phvul.005G033000 Phaseolus vulgaris HOM05D004944 ORTHO05D005989 8.0e-06 54.7 116 35.3
TAR636G1724 Trochodendron aralioides HOM05D004944 ORTHO05D005989 8.0e-06 54.7 116 34.5


User provided reference genes

Program Settings