Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI03792 Sapria himalayana HOM05D005949 ORTHO05D006945 9.4e-167 590.1 296 100.0
Atru.chr6.2442 Acer truncatum HOM05D005949 ORTHO05D006945 2.1e-105 386.3 248 75.4
Manes.17G110300 Manihot esculenta HOM05D005949 ORTHO05D006945 8.6e-104 380.9 252 72.6
MSTRG.15541 Avicennia marina HOM05D005949 ORTHO05D006945 1.9e-103 379.8 252 71.0
Nitab4.5_0001562g0070 Nicotiana tabacum HOM05D005949 ORTHO05D006945 9.5e-103 377.5 248 73.8
Nitab4.5_0006683g0100 Nicotiana tabacum HOM05D005949 ORTHO05D006945 9.5e-103 377.5 248 74.2
GSVIVG01032367001 Vitis vinifera HOM05D005949 ORTHO05D006945 1.2e-102 377.1 248 71.8
CAN.G1235.24 Capsicum annuum HOM05D005949 ORTHO05D006945 2.8e-102 375.9 248 73.0
CSS0029670 Camellia sinensis var. sinensis HOM05D005949 ORTHO05D006945 4.7e-102 375.2 252 70.6
Ciclev10015245m.g Citrus clementina HOM05D005949 ORTHO05D006945 1.4e-101 373.6 248 74.2
Nn2g12389 Nelumbo nucifera HOM05D005949 ORTHO05D006945 1.5e-100 370.2 252 70.6
CiPaw.03G046600 Carya illinoinensis HOM05D005949 ORTHO05D006945 2.2e-99 366.3 242 71.9
Migut.K01417 Erythranthe guttata HOM05D005949 ORTHO05D006945 6.4e-99 364.8 252 67.5
ClCG10G013730 Citrullus lanatus HOM05D005949 ORTHO05D006945 8.4e-99 364.4 252 69.0
Eucgr.J02262 Eucalyptus grandis HOM05D005949 ORTHO05D006945 1.4e-98 363.6 245 71.4
Sed0011104 Sechium edule HOM05D005949 ORTHO05D006945 7.1e-98 361.3 252 66.7
Cfa007328 Carpinus fangiana HOM05D005949 ORTHO05D006945 9.2e-98 360.9 249 70.7
MELO3C026595.2 Cucumis melo HOM05D005949 ORTHO05D006945 1.2e-97 360.5 252 67.5
Gorai.011G094000 Gossypium raimondii HOM05D005949 ORTHO05D006945 2.1e-97 359.8 245 71.8
Lj7C602T3 Lonicera japonica HOM05D005949 ORTHO05D006945 2.1e-97 359.8 280 63.9
Gohir.D10G085800 Gossypium hirsutum HOM05D005949 ORTHO05D006945 4.6e-97 358.6 245 71.8
Solyc01g112020.3 Solanum lycopersicum HOM05D005949 ORTHO05D006945 4.6e-97 358.6 248 70.6
RhsimUnG0006400 Rhododendron simsii HOM05D005949 ORTHO05D006945 6.0e-97 358.2 252 68.7
RhsimUnG0087200 Rhododendron simsii HOM05D005949 ORTHO05D006945 6.0e-97 358.2 252 68.7
AUR62043287 Chenopodium quinoa HOM05D005949 ORTHO05D006945 7.8e-97 357.8 252 67.1
Sopen01g054070 Solanum pennellii HOM05D005949 ORTHO05D006945 7.8e-97 357.8 248 69.8
PGSC0003DMG400018653 Solanum tuberosum HOM05D005949 ORTHO05D006945 1.0e-96 357.5 248 69.8
AUR62028447 Chenopodium quinoa HOM05D005949 ORTHO05D006945 1.3e-96 357.1 252 67.1
COL.COLO4_29188 Corchorus olitorius HOM05D005949 ORTHO05D006945 1.7e-96 356.7 247 69.6
TAR374G0398 Trochodendron aralioides HOM05D005949 ORTHO05D006945 5.1e-96 355.1 252 67.5
unitig_88.g27782 Utricularia gibba HOM05D005949 ORTHO05D006945 5.1e-96 355.1 247 68.8
Duzib264G1167 Durio zibethinus HOM05D005949 ORTHO05D006945 4.3e-95 352.1 252 67.9
Gohir.A10G101600 Gossypium hirsutum HOM05D005949 ORTHO05D006945 5.6e-95 351.7 241 71.4
SGA_v2.0_scaffold47G17523 Striga asiatica HOM05D005949 ORTHO05D006945 1.2e-94 350.5 254 65.7
Haze_14768 Corylus avellana HOM05D005949 ORTHO05D006945 1.6e-94 350.1 264 66.3
CsaV3_3G042930 Cucumis sativus L. HOM05D000631 ORTHO05D000524 2.1e-94 349.7 252 65.5
QL02p073821 Quercus lobata HOM05D005949 ORTHO05D006945 4.7e-94 348.6 241 68.5
Thecc.04G021200 Theobroma cacao HOM05D005949 ORTHO05D006945 1.1e-93 347.4 238 68.5
Phvul.004G060400 Phaseolus vulgaris HOM05D005949 ORTHO05D006945 3.1e-93 345.9 248 64.9
CANSAT64G2213 Cannabis sativa HOM05D005949 ORTHO05D006945 6.9e-93 344.7 243 67.9
Glyma.05G115200 Glycine max HOM05D005949 ORTHO05D006945 1.5e-92 343.6 248 65.3
TWI12G1469 Tripterygium wilfordii HOM05D005949 ORTHO05D006945 7.6e-92 341.3 241 68.0
VMungo0464G1442 Vigna mungo HOM05D005949 ORTHO05D006945 2.2e-91 339.7 248 63.3
ECA232G4961 Erigeron canadensis HOM05D005949 ORTHO05D006945 2.9e-91 339.3 250 64.8
Glyma.19G052100 Glycine max HOM05D005949 ORTHO05D006945 2.9e-91 339.3 248 64.9
RcHm_v2.0_Chr2g0173461 Rosa chinensis HOM05D005949 ORTHO05D006945 6.4e-91 338.2 248 64.9
MD09G1021300 Malus domestica HOM05D005949 ORTHO05D006945 2.4e-90 336.3 242 66.5
MD17G1021300 Malus domestica HOM05D005949 ORTHO05D006945 2.4e-90 336.3 242 66.5
Lsat_1_v5_gn_4_184520 Lactuca sativa HOM05D005949 ORTHO05D006945 3.2e-90 335.9 250 64.0
HanXRQChr15g0486811 Helianthus annuus HOM05D005949 ORTHO05D006945 7.1e-90 334.7 250 64.0
PGR083G1217 Punica granatum HOM05D005949 ORTHO05D006945 7.1e-90 334.7 238 67.2
Cc09_g05780 Coffea canephora HOM05D005949 ORTHO05D006945 1.2e-89 334.0 234 67.1
THA.LOC104819734 Tarenaya hassleriana HOM05D005949 ORTHO05D006945 1.2e-89 334.0 252 66.3
FAN09G2334 Fragaria x ananassa HOM05D005949 ORTHO05D006945 2.1e-89 333.2 252 63.5
FAN05G2654 Fragaria x ananassa HOM05D005949 ORTHO05D006945 6.0e-89 331.6 248 64.5
FAN02G3213 Fragaria x ananassa HOM05D005949 ORTHO05D006945 1.0e-88 330.9 246 64.6
Ah.02g128260 Amaranthus hybridus HOM05D005949 ORTHO05D006945 3.0e-88 329.3 281 58.4
FvH4_6g51990 Fragaria vesca HOM05D005949 ORTHO05D006945 5.1e-88 328.6 244 64.8
Lj2g0004695 Lotus japonicus HOM05D005949 ORTHO05D006945 8.7e-88 327.8 247 63.6
Lalb_Chr06g0174481 Lupinus albus HOM05D005949 ORTHO05D006945 1.1e-87 327.4 253 63.2
ATR0199G040 Amborella trichopoda HOM05D005949 ORTHO05D006945 2.5e-87 326.2 233 64.4
EL10Ac6g14123 Beta vulgaris HOM05D005949 ORTHO05D006945 2.1e-86 323.2 313 52.4
Prupe.3G295200 Prunus persica HOM05D005949 ORTHO05D006945 2.1e-86 323.2 241 65.1
FAN14G1023 Fragaria x ananassa HOM05D005949 ORTHO05D006945 6.2e-86 321.6 243 64.2
Aqoxy5G03678 Aquilegia oxysepala HOM05D005949 ORTHO05D006945 8.1e-86 321.2 247 61.9
Psat5g064960 Pisum sativum HOM05D005949 ORTHO05D006945 4.0e-85 318.9 248 60.5
Thhalv10025194m.g Eutrema salsugineum HOM05D005949 ORTHO05D006945 9.9e-84 314.3 248 61.7
Medtr6g021740 Medicago truncatula HOM05D005949 ORTHO05D006945 1.7e-83 313.5 246 59.8
Ca_04380_v3 Cicer arietinum L. HOM05D005949 ORTHO05D006945 4.9e-83 312.0 242 60.3
Aa31LG6G12800 Aethionema arabicum HOM05D005949 ORTHO05D006945 1.1e-82 310.8 248 60.1
DCAR_021740 Daucus carota HOM05D005949 ORTHO05D006945 1.1e-82 310.8 258 60.5
CARHR244220 Cardamine hirsuta HOM05D005949 ORTHO05D006945 1.4e-82 310.5 248 60.5
AL7G15220 Arabidopsis lyrata HOM05D005949 ORTHO05D006945 1.9e-82 310.1 248 60.1
AT4G35850 Arabidopsis thaliana HOM05D005949 ORTHO05D006945 2.4e-82 309.7 248 59.7
Carub.0007s0438 Capsella rubella HOM05D005949 ORTHO05D006945 3.2e-82 309.3 248 59.7
Potri.001G341400 Populus trichocarpa HOM05D005949 ORTHO05D006945 5.4e-82 308.5 236 64.0
Sabra16G0221400 Salix brachista HOM05D005949 ORTHO05D006945 5.4e-82 308.5 236 63.6
TPR.G16864 Trifolium pratense HOM05D005949 ORTHO05D006945 5.4e-82 308.5 244 59.8
TPR.G8694 Trifolium pratense HOM05D005949 ORTHO05D006945 2.1e-81 306.6 242 59.9
BcaNung04881 Brassica carinata HOM05D005949 ORTHO05D006945 3.5e-81 305.8 248 60.1
BraA01t00268Z Brassica rapa HOM05D005949 ORTHO05D006945 6.0e-81 305.1 248 59.7
BcaNung00787 Brassica carinata HOM05D005949 ORTHO05D006945 1.0e-80 304.3 248 59.7
C01p03190 Brassica napus HOM05D005949 ORTHO05D006945 1.0e-80 304.3 248 59.7
BolC1t00304H Brassica oleracea HOM05D005949 ORTHO05D006945 1.8e-80 303.5 248 59.3
A01p02870 Brassica napus HOM05D005949 ORTHO05D006945 3.0e-80 302.8 248 58.9
Peaxi162Scf00420g00016 Petunia axillaris HOM05D005949 ORTHO05D006945 3.9e-80 302.4 249 62.7
arahy.Tifrunner.gnm1.ann1.4A4JE9 Arachis hypogaea HOM05D005949 ORTHO05D006945 8.7e-80 301.2 242 61.2
CSS0002019 Camellia sinensis var. sinensis HOM05D005949 ORTHO05D006945 3.3e-79 299.3 248 61.3
SEGI_30195 Sequoiadendron giganteum HOM05D005949 ORTHO05D006945 4.8e-78 295.4 250 56.8
arahy.Tifrunner.gnm1.ann1.BK7H4N Arachis hypogaea HOM05D005949 ORTHO05D006945 2.4e-77 293.1 261 57.5
PSO063G1157 Papaver somniferum HOM05D005949 ORTHO05D006945 2.4e-77 293.1 253 58.5
PSO754G0010 Papaver somniferum HOM05D005949 ORTHO05D006945 9.9e-76 287.7 253 58.1
HPP92_016937 Vanilla planifolia HOM05D005949 ORTHO05D006945 2.9e-75 286.2 248 59.3
Sc09g0007150 Simmondsia chinensis HOM05D005949 ORTHO05D006945 5.1e-72 275.4 209 66.0
Zm00001eb354320 Zea mays HOM05D005949 ORTHO05D006945 6.2e-70 268.5 237 57.0
Os05g0145600 Oryza sativa ssp. japonica HOM05D005949 ORTHO05D006945 9.0e-69 264.6 229 57.6
Dinv25719 Davidia involucrata HOM05D005949 ORTHO05D006945 1.2e-65 254.2 169 72.2
Thhalv10023015m.g Eutrema salsugineum HOM05D005949 ORTHO05D006945 2.1e-65 253.4 227 55.5
CSS0020931 Camellia sinensis var. sinensis HOM05D005949 ORTHO05D006945 5.5e-58 228.8 159 67.3
Actinidia36133 Actinidia chinensis HOM05D005949 ORTHO05D006945 3.9e-56 222.6 143 73.4
Duzib147G0933 Durio zibethinus HOM05D005949 ORTHO05D006945 3.8e-51 206.1 222 51.4
CDE04G3569 Ceratophyllum demersum HOM05D005949 ORTHO05D006945 3.3e-47 193.0 153 58.2
vmacro05885 Vaccinium macrocarpon HOM05D005949 ORTHO05D006945 1.3e-46 191.0 157 62.4
SMO201G0168 Selaginella moellendorffii HOM05D005949 ORTHO05D006945 1.6e-41 174.1 239 36.4
AL7G15200 Arabidopsis lyrata HOM05D005949 ORTHO05D006945 2.3e-40 170.2 222 41.0
Pp3c1_21850 Physcomitrium patens HOM05D005949 ORTHO05D006945 4.4e-39 166.0 235 38.3
Sc07g0004380 Simmondsia chinensis HOM05D005949 ORTHO05D006945 1.2e-36 157.9 144 55.6
CBR_g20407 Chara braunii HOM05D005949 ORTHO05D006945 3.5e-36 156.4 235 34.5
CBR_g20410 Chara braunii HOM05D005949 ORTHO05D006945 1.3e-35 154.5 235 34.0
MD09G1021100 Malus domestica HOM05D005949 ORTHO05D006945 1.7e-35 154.1 111 64.9
Cpa.g.sc130.71 Carica papaya HOM05D005949 ORTHO05D006945 2.9e-35 153.3 111 66.7
CAN.G370.99 Capsicum annuum HOM05D000140 ORTHO05D000087 1.9e-34 150.6 110 64.5
MBI10_g15883_MAGBIO Magnolia biondii HOM05D005949 ORTHO05D006945 7.2e-34 148.7 111 65.8
Mapoly0062s0069 Marchantia polymorpha HOM05D005949 ORTHO05D006945 1.6e-33 147.5 241 36.1
Pp3c14_7210 Physcomitrium patens HOM05D005949 ORTHO05D006945 1.6e-33 147.5 225 34.2
Zm00001eb120940 Zea mays HOM05D005949 ORTHO05D006945 3.5e-28 129.8 133 51.1
AagrBONN_evm.TU.Sc2ySwM_117.2156 Anthoceros agrestis HOM05D005949 ORTHO05D006945 5.9e-28 129.0 245 33.1
Actinidia36134 Actinidia chinensis HOM05D005949 ORTHO05D006945 2.2e-27 127.1 88 65.9
MBI10_g37260_MAGBIO Magnolia biondii HOM05D005949 ORTHO05D006945 5.5e-26 122.5 96 62.5
Sp7g33630 Schrenkiella parvula HOM05D005949 ORTHO05D006945 9.4e-26 121.7 110 54.5
Actinidia05972 Actinidia chinensis HOM05D005088 ORTHO05D006914 6.8e-24 115.5 191 40.3
Psat1g081680 Pisum sativum HOM05D005949 ORTHO05D006945 3.4e-23 113.2 76 68.4
Hma1.2p1_0818F.1_g223360 Hydrangea macrophylla HOM05D005949 ORTHO05D006945 4.5e-20 102.8 76 63.2
CAN.G15.16 Capsicum annuum HOM05D005949 ORTHO05D006945 1.5e-15 87.8 76 56.6
Sc07g0004370 Simmondsia chinensis HOM05D005949 ORTHO05D006945 7.5e-15 85.5 68 64.7
Cpa.g.sc130.69 Carica papaya HOM05D005949 ORTHO05D006945 1.4e-13 81.3 66 60.6
Psat1g081720 Pisum sativum HOM05D005949 ORTHO05D006945 5.4e-13 79.3 98 42.9
CDE04G3731 Ceratophyllum demersum HOM05D005949 ORTHO05D006945 3.6e-09 66.6 47 61.7
CAN.G479.6 Capsicum annuum HOM05D005949 ORTHO05D006945 6.1e-09 65.9 40 72.5
CAN.G1258.4 Capsicum annuum HOM05D005949 ORTHO05D006945 3.0e-08 63.5 38 73.7
CAN.G2149.1 Capsicum annuum HOM05D001265 ORTHO05D006945 3.0e-08 63.5 40 70.0
CAN.G898.5 Capsicum annuum HOM05D005949 ORTHO05D006945 3.0e-08 63.5 43 65.1
MBI07_g20478_MAGBIO Magnolia biondii HOM05D000141 ORTHO05D001968 5.2e-08 62.8 46 65.2
CAN.G1086.1 Capsicum annuum HOM05D005949 ORTHO05D006945 2.2e-06 57.4 40 65.0


User provided reference genes

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