Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI03385 Sapria himalayana HOM05D003776 ORTHO05D004459 2.0e-83 312.4 154 100.0
Manes.05G119700 Manihot esculenta HOM05D003776 ORTHO05D004459 2.3e-36 156.0 117 72.6
Potri.006G119600 Populus trichocarpa HOM05D003776 ORTHO05D004459 6.8e-36 154.5 116 69.8
Prupe.7G242500 Prunus persica HOM05D003776 ORTHO05D004459 1.7e-34 149.8 117 65.8
Sabra06G0094200 Salix brachista HOM05D003776 ORTHO05D004459 2.2e-34 149.4 116 69.0
Cfa003371 Carpinus fangiana HOM05D003776 ORTHO05D004459 8.4e-34 147.5 117 66.7
CiPaw.03G244000 Carya illinoinensis HOM05D003776 ORTHO05D004459 1.1e-33 147.1 117 65.0
QL02p088328 Quercus lobata HOM05D003776 ORTHO05D004459 3.2e-33 145.6 117 65.8
Duzib168G2222 Durio zibethinus HOM05D003776 ORTHO05D004459 2.7e-32 142.5 117 60.7
CANSAT11G0130 Cannabis sativa HOM05D003776 ORTHO05D004459 4.6e-32 141.7 116 60.3
FvH4_1g03320 Fragaria vesca HOM05D003776 ORTHO05D004459 4.6e-32 141.7 117 60.7
FAN23G1640 Fragaria x ananassa HOM05D003776 ORTHO05D004459 4.6e-32 141.7 117 59.8
FAN26G1438 Fragaria x ananassa HOM05D003776 ORTHO05D004459 4.6e-32 141.7 117 59.8
COL.COLO4_35084 Corchorus olitorius HOM05D003776 ORTHO05D004459 6.0e-32 141.4 117 63.2
FAN19G1245 Fragaria x ananassa HOM05D003776 ORTHO05D004459 6.0e-32 141.4 125 58.4
Atru.chr7.1164 Acer truncatum HOM05D003776 ORTHO05D004459 7.8e-32 141.0 117 62.4
RcHm_v2.0_Chr2g0088511 Rosa chinensis HOM05D003776 ORTHO05D004459 1.0e-31 140.6 117 60.7
MD02G1032900 Malus domestica HOM05D003776 ORTHO05D004459 1.7e-31 139.8 117 60.7
Ca_14403_v3 Cicer arietinum L. HOM05D003776 ORTHO05D004459 3.0e-31 139.0 117 61.5
Gorai.001G042000 Gossypium raimondii HOM05D003776 ORTHO05D004459 3.9e-31 138.7 117 61.5
TPR.G21471 Trifolium pratense HOM05D003776 ORTHO05D004459 6.6e-31 137.9 125 57.6
Dinv36529 Davidia involucrata HOM05D003776 ORTHO05D004459 1.1e-30 137.1 117 60.7
Medtr7g099880 Medicago truncatula HOM05D003776 ORTHO05D004459 1.5e-30 136.7 117 60.7
Oeu055885.1 Olea europaea HOM05D003776 ORTHO05D004459 3.3e-30 135.6 117 61.5
AUR62013362 Chenopodium quinoa HOM05D003776 ORTHO05D004459 4.3e-30 135.2 117 59.8
Thecc.09G126200 Theobroma cacao HOM05D003776 ORTHO05D004459 4.3e-30 135.2 117 61.5
AUR62011127 Chenopodium quinoa HOM05D003776 ORTHO05D004459 5.6e-30 134.8 117 59.8
Haze_25580 Corylus avellana HOM05D003776 ORTHO05D004459 5.6e-30 134.8 108 65.7
Lj7C629G11 Lonicera japonica HOM05D003776 ORTHO05D004459 5.6e-30 134.8 117 60.7
Ah.09g226230 Amaranthus hybridus HOM05D003776 ORTHO05D004459 9.6e-30 134.0 117 59.0
EL10Ac8g18652 Beta vulgaris HOM05D003776 ORTHO05D004459 9.6e-30 134.0 117 59.8
Nn8g39448 Nelumbo nucifera HOM05D003776 ORTHO05D004459 9.6e-30 134.0 117 59.8
Psat1g024680 Pisum sativum HOM05D003776 ORTHO05D004459 9.6e-30 134.0 117 59.8
Sc08g0006640 Simmondsia chinensis HOM05D003776 ORTHO05D004459 1.2e-29 133.7 117 59.8
Glyma.06G222100 Glycine max HOM05D003776 ORTHO05D004459 2.8e-29 132.5 117 59.0
Lalb_Chr08g0234831 Lupinus albus HOM05D003776 ORTHO05D004459 3.6e-29 132.1 117 57.3
Actinidia26393 Actinidia chinensis HOM05D003776 ORTHO05D004459 4.7e-29 131.7 117 61.5
Eucgr.C04218 Eucalyptus grandis HOM05D003776 ORTHO05D004459 4.7e-29 131.7 117 63.2
Lj3g0001115 Lotus japonicus HOM05D003776 ORTHO05D004459 4.7e-29 131.7 117 59.8
GSVIVG01015528001 Vitis vinifera HOM05D003776 ORTHO05D004459 1.1e-28 130.6 117 57.3
TWI34G1787 Tripterygium wilfordii HOM05D003776 ORTHO05D004459 1.4e-28 130.2 117 61.5
TAR625G0211 Trochodendron aralioides HOM05D003776 ORTHO05D004459 1.4e-28 130.2 114 59.6
Lalb_Chr11g0072121 Lupinus albus HOM05D003776 ORTHO05D004459 1.8e-28 129.8 117 57.3
THA.LOC104808989 Tarenaya hassleriana HOM05D003776 ORTHO05D004459 1.8e-28 129.8 117 61.5
MSTRG.19598 Avicennia marina HOM05D003776 ORTHO05D004459 2.4e-28 129.4 119 60.5
Lsat_1_v5_gn_5_96021 Lactuca sativa HOM05D003776 ORTHO05D004459 2.4e-28 129.4 116 58.6
Aqoxy7G02178 Aquilegia oxysepala HOM05D003776 ORTHO05D004459 3.1e-28 129.0 117 57.3
CsaV3_2G002830 Cucumis sativus L. HOM05D003776 ORTHO05D004459 3.1e-28 129.0 117 58.1
vmacro06129 Vaccinium macrocarpon HOM05D003776 ORTHO05D004459 4.0e-28 128.6 117 56.4
VMungo1309G0107 Vigna mungo HOM05D003776 ORTHO05D004459 5.2e-28 128.3 117 58.1
FAN28G2120 Fragaria x ananassa HOM05D003776 ORTHO05D004459 6.8e-28 127.9 108 57.4
Phvul.009G198200 Phaseolus vulgaris HOM05D003776 ORTHO05D004459 6.8e-28 127.9 116 56.0
DCAR_017818 Daucus carota HOM05D003776 ORTHO05D004459 8.9e-28 127.5 116 61.2
PSO170G4267 Papaver somniferum HOM05D003776 ORTHO05D004459 1.2e-27 127.1 118 56.8
Aqoxy3G01756 Aquilegia oxysepala HOM05D003776 ORTHO05D004459 1.5e-27 126.7 117 55.6
Sed0006794 Sechium edule HOM05D003776 ORTHO05D004459 2.0e-27 126.3 117 57.3
PGR102G3028 Punica granatum HOM05D003776 ORTHO05D004459 2.6e-27 125.9 116 55.2
Hund09133 Selenicereus undatus HOM05D003776 ORTHO05D004459 2.6e-27 125.9 117 54.7
Solyc12g006480.2 Solanum lycopersicum HOM05D003776 ORTHO05D004459 3.4e-27 125.6 118 57.6
AL8G25470 Arabidopsis lyrata HOM05D003776 ORTHO05D004459 4.4e-27 125.2 117 55.6
Carub.0008s1091 Capsella rubella HOM05D003776 ORTHO05D004459 4.4e-27 125.2 117 55.6
AT5G51200 Arabidopsis thaliana HOM05D003776 ORTHO05D004459 5.8e-27 124.8 117 55.6
PSO455G0084 Papaver somniferum HOM05D003776 ORTHO05D004459 7.6e-27 124.4 118 55.9
HanXRQChr12g0373951 Helianthus annuus HOM05D003776 ORTHO05D004459 1.3e-26 123.6 116 56.9
Sopen12g002420 Solanum pennellii HOM05D003776 ORTHO05D004459 1.3e-26 123.6 118 56.8
Peaxi162Scf01211g00016 Petunia axillaris HOM05D003776 ORTHO05D004459 1.7e-26 123.2 117 56.4
Cpa.g.c32453 Carica papaya HOM05D003776 ORTHO05D004459 2.9e-26 122.5 117 55.6
CARHR118630 Cardamine hirsuta HOM05D003776 ORTHO05D004459 3.8e-26 122.1 117 54.7
Cc06_g08530 Coffea canephora HOM05D003776 ORTHO05D004459 6.4e-26 121.3 117 53.8
Rhsim03G0247900 Rhododendron simsii HOM05D003776 ORTHO05D004459 8.4e-26 120.9 117 57.3
Nitab4.5_0002658g0150 Nicotiana tabacum HOM05D003776 ORTHO05D004459 1.1e-25 120.6 121 55.4
Migut.J01158 Erythranthe guttata HOM05D003776 ORTHO05D004459 1.4e-25 120.2 117 57.3
HanXRQChr10g0315491 Helianthus annuus HOM05D003776 ORTHO05D004459 1.9e-25 119.8 116 55.2
ECA234G1804 Erigeron canadensis HOM05D003776 ORTHO05D004459 3.2e-25 119.0 116 56.0
Os02g0202300 Oryza sativa ssp. japonica HOM05D003776 ORTHO05D004459 3.2e-25 119.0 116 50.0
Sp4g09050 Schrenkiella parvula HOM05D003776 ORTHO05D004459 3.2e-25 119.0 117 54.7
Aa31LG5G9110 Aethionema arabicum HOM05D003776 ORTHO05D004459 5.4e-25 118.2 117 56.4
unitig_26.g8982 Utricularia gibba HOM05D003776 ORTHO05D004459 5.4e-25 118.2 119 51.3
HanXRQChr04g0119281 Helianthus annuus HOM05D003776 ORTHO05D004459 9.3e-25 117.5 132 49.2
Thhalv10002339m.g Eutrema salsugineum HOM05D003776 ORTHO05D004459 2.1e-24 116.3 117 53.8
MELO3C004510.2 Cucumis melo HOM05D003776 ORTHO05D004459 1.3e-23 113.6 107 56.1
ClCG11G003010 Citrullus lanatus HOM05D003776 ORTHO05D004459 2.3e-23 112.8 107 56.1
A07p17720 Brassica napus HOM05D003776 ORTHO05D004459 8.7e-23 110.9 107 54.2
BraA07t29494Z Brassica rapa HOM05D003776 ORTHO05D004459 8.7e-23 110.9 107 54.2
C07p25670 Brassica napus HOM05D003776 ORTHO05D004459 1.5e-22 110.2 107 54.2
BolC7t43085H Brassica oleracea HOM05D003776 ORTHO05D004459 1.5e-22 110.2 107 54.2
CDE02G1439 Ceratophyllum demersum HOM05D003776 ORTHO05D004459 2.5e-22 109.4 117 54.7
HPP92_008649 Vanilla planifolia HOM05D003776 ORTHO05D004459 5.3e-20 101.7 117 48.7
arahy.Tifrunner.gnm1.ann1.GK8SHH Arachis hypogaea HOM05D003776 ORTHO05D004459 1.5e-19 100.1 118 52.5
ATR0322G072 Amborella trichopoda HOM05D003776 ORTHO05D004459 1.6e-16 90.1 113 47.8
RcHm_v2.0_Chr2g0152361 Rosa chinensis HOM05D003776 ORTHO05D004459 3.5e-16 89.0 119 41.2
SMO347G0235 Selaginella moellendorffii HOM05D003776 ORTHO05D004459 1.1e-14 84.0 117 41.0
Gohir.A07G035800 Gossypium hirsutum HOM05D003776 ORTHO05D004459 4.3e-14 82.0 75 53.3
RcHm_v2.0_Chr2g0152391 Rosa chinensis HOM05D003776 ORTHO05D004459 2.1e-13 79.7 90 44.4
Mapoly0052s0095 Marchantia polymorpha HOM05D003776 ORTHO05D004459 2.8e-13 79.3 116 38.8
AagrBONN_evm.TU.Sc2ySwM_228.87 Anthoceros agrestis HOM05D003776 ORTHO05D004459 8.1e-13 77.8 116 37.1
Pp3c4_20350 Physcomitrium patens HOM05D003776 ORTHO05D004459 4.0e-12 75.5 118 38.1
RcHm_v2.0_Chr5g0007291 Rosa chinensis HOM05D003776 ORTHO05D004459 2.0e-11 73.2 99 45.5
Zm00001eb235620 Zea mays HOM05D003776 ORTHO05D004459 2.0e-11 73.2 74 54.1
CBR_g37692 Chara braunii HOM05D003776 ORTHO05D004459 1.3e-10 70.5 116 32.8
FvH4_6g38790 Fragaria vesca HOM05D003776 ORTHO05D004459 4.9e-10 68.6 113 35.4
RcHm_v2.0_Chr5g0007331 Rosa chinensis HOM05D003776 ORTHO05D004459 6.4e-10 68.2 116 37.1
HPP92_008668 Vanilla planifolia HOM05D003776 ORTHO05D004459 2.5e-06 56.2 71 45.1


User provided reference genes

Program Settings